RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 SAP30BPQ9UHR5 308 aaKnown RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 ASS1P00966 412 aaKnown RBP4.09□□□□□ -1.75
SYNE2-202ENST00000344113 CAPN1P07384 714 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 SNAP25P60880 206 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 IGBP1P78318 339 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 S100A12P80511 92 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 NOC2LQ9Y3T9 749 aaKnown RBP4.09□□□□□ -1.75
SYNE2-202ENST00000344113 EID1Q9Y6B2 187 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 AQRO60306 1485 aaKnown RBP eCLIP4.09□□□□□ -1.75
SYNE2-202ENST00000344113 AMPD3Q01432 767 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 SLFN5Q08AF3 891 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 GATAD2AQ86YP4 633 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 GRPEL2Q8TAA5 225 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 XPO6Q96QU8 1125 aaKnown RBP4.09□□□□□ -1.75
SYNE2-202ENST00000344113 OLFM1Q99784 485 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 SPOCK3Q9BQ16 436 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 GNB5O14775 395 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 ACTN1P12814 892 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 LONRF2Q1L5Z9 754 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 CFAP221Q4G0U5 840 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 ANGPTL8Q6UXH0 198 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 MYLK4Q86YV6 388 aaPredicted RBP4.09□□□□□ -1.75
SYNE2-202ENST00000344113 NUDCD3Q8IVD9 361 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 GTF3C6Q969F1 213 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 SGF29Q96ES7 293 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 SQORQ9Y6N5 450 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 POLE2P56282 527 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 FCHO2Q0JRZ9 810 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 KLHL12Q53G59 568 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 ZNF662Q6ZS27 426 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 ANO5Q75V66 913 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 KCNG4Q8TDN1 519 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 RAB34Q9BZG1 259 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 CLSTN2Q9H4D0 955 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 RASSF9O75901 435 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 TBC1D8O95759 1140 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 FAPQ12884 760 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 LAMC2Q13753 1193 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 CWF19L1Q69YN2 538 aaKnown RBP4.09□□□□□ -1.75
SYNE2-202ENST00000344113 VSIG1Q86XK7 387 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 DYDC2Q96IM9 177 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 EBF2Q9HAK2 575 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 DNAJB4Q9UDY4 337 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 MGRN1O60291 552 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 CCSAPQ6IQ19 270 aaPredicted RBP4.09□□□□□ -1.75
SYNE2-202ENST00000344113 CC2D1AQ6P1N0 951 aaPredicted RBP4.09□□□□□ -1.75
SYNE2-202ENST00000344113 BZW1Q7L1Q6 419 aaKnown RBP4.09□□□□□ -1.75
SYNE2-202ENST00000344113 STAG2Q8N3U4 1231 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 A8MXQ7 604 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 KLHL18O94889 574 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 ARHGAP44Q17R89 818 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 CWF19L2Q2TBE0 894 aaKnown RBP4.09□□□□□ -1.75
SYNE2-202ENST00000344113 ADALQ6DHV7 355 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 BRSK2Q8IWQ3 736 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 KIRREL3Q8IZU9 778 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 ANKRD35Q8N283 1001 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 RFWD2Q8NHY2 731 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 CENPTQ96BT3 561 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 EDC3Q96F86 508 aaKnown RBP4.09□□□□□ -1.75
SYNE2-202ENST00000344113 XPAP23025 273 aaPredicted RBP4.09□□□□□ -1.75
SYNE2-202ENST00000344113 CASP8Q14790 479 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 RABGEF1Q9UJ41 708 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 EIF3HO15372 352 aaKnown RBP eCLIP4.09□□□□□ -1.753e-6■■■■□ 24.3
SYNE2-202ENST00000344113 GARSP41250 739 aaKnown RBP4.09□□□□□ -1.75
SYNE2-202ENST00000344113 USP26Q9BXU7 913 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 LRCH1Q9Y2L9 728 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 SYCE1Q8N0S2 351 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 MAIP1Q8WWC4 291 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 CCT7Q99832 543 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 RPAP3Q9H6T3 665 aaPredicted RBP4.09□□□□□ -1.75
SYNE2-202ENST00000344113 HMG20BQ9P0W2 317 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 HAND2P61296 217 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 LRRC36Q1X8D7 754 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 FAAH2Q6GMR7 532 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 USHBP1Q8N6Y0 703 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 XXYLT1Q8NBI6 393 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 SDCCAG3Q96C92 435 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 SERPINI1Q99574 410 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 TRMT1Q9NXH9 659 aaKnown RBP4.09□□□□□ -1.75
SYNE2-202ENST00000344113 BLMHQ13867 455 aa4.09□□□□□ -1.75
SYNE2-202ENST00000344113 YKT6O15498 198 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 KRT17Q04695 432 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 ACAP3Q96P50 834 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 SLC24A3Q9HC58 644 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 FADS2P1A8MWK0 482 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 CAND2O75155 1236 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 CSB-PGBD3P0DP91 1061 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 PDCD6IPQ8WUM4 868 aaKnown RBP4.09□□□□□ -1.76
SYNE2-202ENST00000344113 TM6SF1Q9BZW5 370 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 NSD3Q9BZ95 1437 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 ATRXP46100 2492 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 FIBPO43427 364 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 TRIM27P14373 513 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 GORASP1Q9BQQ3 440 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF132P52740 706 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 PCNX4Q63HM2 1172 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 UBE2J2Q8N2K1 259 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF692Q9BU19 519 aaPredicted RBP4.09□□□□□ -1.76
SYNE2-202ENST00000344113 A0A0B4J269 797 aa4.09□□□□□ -1.76
SYNE2-202ENST00000344113 PDE6CP51160 858 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms