RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ECE1P42892 770 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 FKBP1CQ5VVH2 108 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 CCDC150Q8NCX0 1101 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 ARHGEF10LQ9HCE6 1279 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 MYOZ2Q9NPC6 264 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 USP17L15C9J2P7 530 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 USP17L13C9JLJ4 530 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 USP17L11C9JVI0 530 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 USP17L18D6R9N7 530 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 USP17L22D6RA61 530 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 USP17L17D6RBQ6 530 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 USP17L19D6RCP7 530 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 USP17L20D6RJB6 530 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 WNT10BO00744 389 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 RIOK3O14730 519 aaKnown RBP20.97■□□□□ 0.95
HOXA9-201ENST00000343483 CBFA2T2O43439 604 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 USP17L24Q0WX57 530 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 SYDE2Q5VT97 1194 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 USP17L6PQ6QN14 398 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 DPF2Q92785 391 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 MED15Q96RN5 788 aa20.97■□□□□ 0.95
HOXA9-201ENST00000343483 EDIL3O43854 480 aa20.96■□□□□ 0.95
HOXA9-201ENST00000343483 RPN1P04843 607 aaKnown RBP20.96■□□□□ 0.95
HOXA9-201ENST00000343483 MTMR9Q96QG7 549 aa20.96■□□□□ 0.95
HOXA9-201ENST00000343483 ZBTB21Q9ULJ3 1066 aa20.96■□□□□ 0.95
HOXA9-201ENST00000343483 SYNRGQ9UMZ2 1314 aa20.95■□□□□ 0.95
HOXA9-201ENST00000343483 PLCG1P19174 1290 aa20.95■□□□□ 0.94
HOXA9-201ENST00000343483 CDK11BP21127 795 aaKnown RBP20.95■□□□□ 0.94
HOXA9-201ENST00000343483 STX17P56962 302 aa20.95■□□□□ 0.94
HOXA9-201ENST00000343483 USH1GQ495M9 461 aa20.95■□□□□ 0.94
HOXA9-201ENST00000343483 FAM83AQ86UY5 434 aa20.95■□□□□ 0.94
HOXA9-201ENST00000343483 ACER1Q8TDN7 264 aa20.95■□□□□ 0.94
HOXA9-201ENST00000343483 AMNQ9BXJ7 453 aa20.95■□□□□ 0.94
HOXA9-201ENST00000343483 GLT8D2Q9H1C3 349 aa20.95■□□□□ 0.94
HOXA9-201ENST00000343483 RMND1Q9NWS8 449 aa20.95■□□□□ 0.94
HOXA9-201ENST00000343483 SCAF8Q9UPN6 1271 aaKnown RBP20.95■□□□□ 0.94
HOXA9-201ENST00000343483 USP27XA6NNY8 438 aa20.95■□□□□ 0.94
HOXA9-201ENST00000343483 DHX8Q14562 1220 aaKnown RBP20.95■□□□□ 0.94
HOXA9-201ENST00000343483 TNIP1Q15025 636 aa20.95■□□□□ 0.94
HOXA9-201ENST00000343483 TMEM266Q2M3C6 531 aa20.95■□□□□ 0.94
HOXA9-201ENST00000343483 CT47A1Q5JQC4 288 aaPredicted RBP20.95■□□□□ 0.94
HOXA9-201ENST00000343483 ARMCX5Q6P1M9 558 aa20.95■□□□□ 0.94
HOXA9-201ENST00000343483 IGSF22Q8N9C0 903 aa20.95■□□□□ 0.94
HOXA9-201ENST00000343483 ZBED3Q96IU2 234 aaPredicted RBP20.95■□□□□ 0.94
HOXA9-201ENST00000343483 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.95■□□□□ 0.94
HOXA9-201ENST00000343483 SYNPO2Q9UMS6 1093 aa20.95■□□□□ 0.94
HOXA9-201ENST00000343483 PPP1R3GB7ZBB8 358 aa20.94■□□□□ 0.94
HOXA9-201ENST00000343483 SFPQP23246 707 aaKnown RBP eCLIP20.94■□□□□ 0.94
HOXA9-201ENST00000343483 C9orf131Q5VYM1 1079 aa20.94■□□□□ 0.94
HOXA9-201ENST00000343483 FBXO11Q86XK2 927 aa20.94■□□□□ 0.94
HOXA9-201ENST00000343483 TSC1Q92574 1164 aa20.94■□□□□ 0.94
HOXA9-201ENST00000343483 SAMSN1Q9NSI8 373 aaKnown RBP20.94■□□□□ 0.94
HOXA9-201ENST00000343483 DDX25Q9UHL0 483 aaKnown RBP20.94■□□□□ 0.94
HOXA9-201ENST00000343483 ZNF18P17022 549 aa20.93■□□□□ 0.94
HOXA9-201ENST00000343483 YY1P25490 414 aa20.93■□□□□ 0.94
HOXA9-201ENST00000343483 PPP4R3AQ6IN85 833 aa20.93■□□□□ 0.94
HOXA9-201ENST00000343483 LRRC15Q8TF66 581 aa20.93■□□□□ 0.94
HOXA9-201ENST00000343483 GOPCQ9HD26 462 aa20.93■□□□□ 0.94
HOXA9-201ENST00000343483 LRWD1Q9UFC0 647 aa20.93■□□□□ 0.94
HOXA9-201ENST00000343483 PDCL3Q9H2J4 239 aa20.93■□□□□ 0.94
HOXA9-201ENST00000343483 KBTBD4Q9NVX7 518 aa20.93■□□□□ 0.94
HOXA9-201ENST00000343483 RNF181Q9P0P0 153 aa20.93■□□□□ 0.94
HOXA9-201ENST00000343483 CTNND2Q9UQB3 1225 aa20.93■□□□□ 0.94
HOXA9-201ENST00000343483 TMX2Q9Y320 296 aa20.93■□□□□ 0.94
HOXA9-201ENST00000343483 TBC1D12O60347 775 aa20.92■□□□□ 0.94
HOXA9-201ENST00000343483 FXR2P51116 673 aaKnown RBP eCLIP20.92■□□□□ 0.94
HOXA9-201ENST00000343483 STAT2P52630 851 aa20.92■□□□□ 0.94
HOXA9-201ENST00000343483 KIAA1755Q5JYT7 1200 aa20.92■□□□□ 0.94
HOXA9-201ENST00000343483 SPATA1Q5VX52 437 aa20.92■□□□□ 0.94
HOXA9-201ENST00000343483 CCAR2Q8N163 923 aaKnown RBP20.92■□□□□ 0.94
HOXA9-201ENST00000343483 CALML4Q96GE6 196 aa20.92■□□□□ 0.94
HOXA9-201ENST00000343483 MMTAG2Q9BU76 263 aaKnown RBP20.92■□□□□ 0.94
HOXA9-201ENST00000343483 CUEDC2Q9H467 287 aa20.92■□□□□ 0.94
HOXA9-201ENST00000343483 TAL1P17542 331 aaPredicted RBP20.92■□□□□ 0.94
HOXA9-201ENST00000343483 ZYXQ15942 572 aaKnown RBP20.92■□□□□ 0.94
HOXA9-201ENST00000343483 ZNF658Q5TYW1 1059 aaPredicted RBP20.92■□□□□ 0.94
HOXA9-201ENST00000343483 BTNL9Q6UXG8 535 aa20.92■□□□□ 0.94
HOXA9-201ENST00000343483 RAB34Q9BZG1 259 aa20.92■□□□□ 0.94
HOXA9-201ENST00000343483 TRMT1Q9NXH9 659 aaKnown RBP20.92■□□□□ 0.94
HOXA9-201ENST00000343483 PRR12Q9ULL5 1215 aa20.92■□□□□ 0.94
HOXA9-201ENST00000343483 POTEMA6NI47 508 aa20.91■□□□□ 0.94
HOXA9-201ENST00000343483 NRDCO43847 1150 aa20.91■□□□□ 0.94
HOXA9-201ENST00000343483 MARCH6O60337 910 aa20.91■□□□□ 0.94
HOXA9-201ENST00000343483 EGFRP00533 1210 aa20.91■□□□□ 0.94
HOXA9-201ENST00000343483 MYL1P05976 194 aa20.91■□□□□ 0.94
HOXA9-201ENST00000343483 GCFC2P16383 781 aaKnown RBP20.91■□□□□ 0.94
HOXA9-201ENST00000343483 FAM83BQ5T0W9 1011 aa20.91■□□□□ 0.94
HOXA9-201ENST00000343483 CEP135Q66GS9 1140 aa20.91■□□□□ 0.94
HOXA9-201ENST00000343483 MAP7D2Q96T17 732 aa20.91■□□□□ 0.94
HOXA9-201ENST00000343483 ANO3Q9BYT9 981 aa20.91■□□□□ 0.94
HOXA9-201ENST00000343483 MAGEF1Q9HAY2 307 aa20.91■□□□□ 0.94
HOXA9-201ENST00000343483 KCND1Q9NSA2 647 aa20.91■□□□□ 0.94
HOXA9-201ENST00000343483 PAXBP1Q9Y5B6 917 aa20.91■□□□□ 0.94
HOXA9-201ENST00000343483 MEIS2O14770 477 aa20.9■□□□□ 0.94
HOXA9-201ENST00000343483 COBLO75128 1261 aa20.9■□□□□ 0.94
HOXA9-201ENST00000343483 CAP2P40123 477 aa20.9■□□□□ 0.94
HOXA9-201ENST00000343483 RASA3Q14644 834 aa20.9■□□□□ 0.94
HOXA9-201ENST00000343483 PTPN14Q15678 1187 aa20.9■□□□□ 0.94
HOXA9-201ENST00000343483 PTPN21Q16825 1174 aa20.9■□□□□ 0.94
HOXA9-201ENST00000343483 GDAQ9Y2T3 454 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms