RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 CYLC1P35663 651 aaPredicted RBP26.82■■□□□ 1.88
NELFB-201ENST00000343053 EIF6P56537 245 aaKnown RBP26.82■■□□□ 1.88
NELFB-201ENST00000343053 SPTY2D1Q68D10 685 aaPredicted RBP26.82■■□□□ 1.88
NELFB-201ENST00000343053 CLEC10AQ8IUN9 316 aa26.82■■□□□ 1.88
NELFB-201ENST00000343053 EYA3Q99504 573 aa26.82■■□□□ 1.88
NELFB-201ENST00000343053 PLEKHA4Q9H4M7 779 aa26.82■■□□□ 1.88
NELFB-201ENST00000343053 TM4SF1P30408 202 aa26.81■■□□□ 1.88
NELFB-201ENST00000343053 USP14P54578 494 aa26.81■■□□□ 1.88
NELFB-201ENST00000343053 CCDC96Q2M329 555 aa26.81■■□□□ 1.88
NELFB-201ENST00000343053 FOXR1Q6PIV2 292 aa26.81■■□□□ 1.88
NELFB-201ENST00000343053 MMTAG2Q9BU76 263 aaKnown RBP26.81■■□□□ 1.88
NELFB-201ENST00000343053 SMARCAL1Q9NZC9 954 aa26.81■■□□□ 1.88
NELFB-201ENST00000343053 KRT83P78385 493 aa26.81■■□□□ 1.88
NELFB-201ENST00000343053 MEA1Q16626 185 aa26.81■■□□□ 1.88
NELFB-201ENST00000343053 GJA10Q969M2 543 aa26.81■■□□□ 1.88
NELFB-201ENST00000343053 DHTKD1Q96HY7 919 aaPredicted RBP26.81■■□□□ 1.88
NELFB-201ENST00000343053 NYXQ9GZU5 481 aa26.81■■□□□ 1.88
NELFB-201ENST00000343053 SEMA6BQ9H3T3 888 aa26.81■■□□□ 1.88
NELFB-201ENST00000343053 MLXIPQ9HAP2 919 aa26.81■■□□□ 1.88
NELFB-201ENST00000343053 SPATA31A5Q5VU36 1347 aa26.8■■□□□ 1.88
NELFB-201ENST00000343053 SPATA31A7Q8IWB4 1347 aa26.8■■□□□ 1.88
NELFB-201ENST00000343053 SKIDA1Q1XH10 827 aa26.8■■□□□ 1.88
NELFB-201ENST00000343053 TPTE2Q6XPS3 522 aa26.8■■□□□ 1.88
NELFB-201ENST00000343053 DAGLBQ8NCG7 672 aa26.8■■□□□ 1.88
NELFB-201ENST00000343053 GLIS3Q8NEA6 775 aa26.8■■□□□ 1.88
NELFB-201ENST00000343053 MAST2Q6P0Q8 1798 aa26.8■■□□□ 1.88
NELFB-201ENST00000343053 NEK8Q86SG6 692 aa26.8■■□□□ 1.88
NELFB-201ENST00000343053 C2CD5Q86YS7 1000 aa26.8■■□□□ 1.88
NELFB-201ENST00000343053 GBP3Q9H0R5 595 aa26.8■■□□□ 1.88
NELFB-201ENST00000343053 THRAP3Q9Y2W1 955 aaKnown RBP26.8■■□□□ 1.88
NELFB-201ENST00000343053 CAPN6Q9Y6Q1 641 aa26.8■■□□□ 1.88
NELFB-201ENST00000343053 POTEMA6NI47 508 aa26.79■■□□□ 1.88
NELFB-201ENST00000343053 BTDP43251 543 aa26.79■■□□□ 1.88
NELFB-201ENST00000343053 ZMYND12Q9H0C1 365 aa26.79■■□□□ 1.88
NELFB-201ENST00000343053 NARFQ9UHQ1 456 aa26.79■■□□□ 1.88
NELFB-201ENST00000343053 MATR3P43243 847 aaKnown RBP eCLIP26.79■■□□□ 1.88
NELFB-201ENST00000343053 CDK8P49336 464 aa26.79■■□□□ 1.88
NELFB-201ENST00000343053 ZBED6P86452 979 aa26.79■■□□□ 1.88
NELFB-201ENST00000343053 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.79■■□□□ 1.88
NELFB-201ENST00000343053 CCDC155Q8N6L0 562 aa26.79■■□□□ 1.88
NELFB-201ENST00000343053 ANKRD13CQ8N6S4 541 aa26.79■■□□□ 1.88
NELFB-201ENST00000343053 CEP95Q96GE4 821 aa26.79■■□□□ 1.88
NELFB-201ENST00000343053 FAM204AQ9H8W3 233 aa26.79■■□□□ 1.88
NELFB-201ENST00000343053 EHD2Q9NZN4 543 aa26.79■■□□□ 1.88
NELFB-201ENST00000343053 BAG3O95817 575 aa26.78■■□□□ 1.88
NELFB-201ENST00000343053 CXCR5P32302 372 aa26.78■■□□□ 1.88
NELFB-201ENST00000343053 LRRC41Q15345 812 aa26.78■■□□□ 1.88
NELFB-201ENST00000343053 CCDC47Q96A33 483 aaKnown RBP26.78■■□□□ 1.88
NELFB-201ENST00000343053 COA7Q96BR5 231 aa26.78■■□□□ 1.88
NELFB-201ENST00000343053 MMRN2Q9H8L6 949 aa26.78■■□□□ 1.88
NELFB-201ENST00000343053 NAV1Q8NEY1 1877 aa26.78■■□□□ 1.88
NELFB-201ENST00000343053 EZH2Q15910 746 aaKnown RBP26.78■■□□□ 1.88
NELFB-201ENST00000343053 SOGA3Q5TF21 947 aa26.78■■□□□ 1.88
NELFB-201ENST00000343053 CCDC42Q96M95 316 aa26.78■■□□□ 1.88
NELFB-201ENST00000343053 SEC63Q9UGP8 760 aaKnown RBP26.78■■□□□ 1.88
NELFB-201ENST00000343053 IRS2Q9Y4H2 1338 aa26.78■■□□□ 1.88
NELFB-201ENST00000343053 BICDL2A1A5D9 508 aa26.77■■□□□ 1.88
NELFB-201ENST00000343053 USP17L5A8MUK1 530 aa26.77■■□□□ 1.88
NELFB-201ENST00000343053 TDP2O95551 362 aa26.77■■□□□ 1.88
NELFB-201ENST00000343053 PAPD7Q5XG87 772 aaKnown RBP26.77■■□□□ 1.88
NELFB-201ENST00000343053 WDR93Q6P2C0 686 aa26.77■■□□□ 1.88
NELFB-201ENST00000343053 ANKS1AQ92625 1134 aa26.77■■□□□ 1.88
NELFB-201ENST00000343053 SNED1Q8TER0 1413 aa26.77■■□□□ 1.88
NELFB-201ENST00000343053 SLC37A4O43826 429 aa26.77■■□□□ 1.88
NELFB-201ENST00000343053 PRPHP41219 470 aa26.77■■□□□ 1.88
NELFB-201ENST00000343053 FKBP15Q5T1M5 1219 aa26.77■■□□□ 1.88
NELFB-201ENST00000343053 KRT25Q7Z3Z0 450 aa26.77■■□□□ 1.88
NELFB-201ENST00000343053 C6orf50Q9HD87 102 aa26.77■■□□□ 1.88
NELFB-201ENST00000343053 MOCS3O95396 460 aa26.76■■□□□ 1.87
NELFB-201ENST00000343053 TEX11Q8IYF3 940 aa26.76■■□□□ 1.87
NELFB-201ENST00000343053 WDR66Q8TBY9 1149 aa26.76■■□□□ 1.87
NELFB-201ENST00000343053 RRP36Q96EU6 259 aaKnown RBP26.76■■□□□ 1.87
NELFB-201ENST00000343053 EP400Q96L91 3159 aa26.76■■□□□ 1.87
NELFB-201ENST00000343053 MYMKA6NI61 221 aa26.76■■□□□ 1.87
NELFB-201ENST00000343053 RNF40O75150 1001 aa26.76■■□□□ 1.87
NELFB-201ENST00000343053 ACTN2P35609 894 aa26.76■■□□□ 1.87
NELFB-201ENST00000343053 KIF5AQ12840 1032 aa26.76■■□□□ 1.87
NELFB-201ENST00000343053 REXO1Q8N1G1 1221 aaKnown RBP26.76■■□□□ 1.87
NELFB-201ENST00000343053 LRRC47Q8N1G4 583 aaKnown RBP26.76■■□□□ 1.87
NELFB-201ENST00000343053 SECISBP2LQ93073 1101 aaKnown RBP26.76■■□□□ 1.87
NELFB-201ENST00000343053 NUDT12Q9BQG2 462 aa26.76■■□□□ 1.87
NELFB-201ENST00000343053 TNRC6CQ9HCJ0 1690 aaKnown RBP26.76■■□□□ 1.87
NELFB-201ENST00000343053 SBF2Q86WG5 1849 aa26.76■■□□□ 1.87
NELFB-201ENST00000343053 LAD1O00515 517 aa26.75■■□□□ 1.87
NELFB-201ENST00000343053 TRIM66O15016 1216 aa26.75■■□□□ 1.87
NELFB-201ENST00000343053 CALML4Q96GE6 196 aa26.75■■□□□ 1.87
NELFB-201ENST00000343053 RTFDC1Q9BY42 306 aaPredicted RBP26.75■■□□□ 1.87
NELFB-201ENST00000343053 ARHGAP20Q9P2F6 1191 aa26.75■■□□□ 1.87
NELFB-201ENST00000343053 EIF3CLB5ME19 914 aaKnown RBP26.75■■□□□ 1.87
NELFB-201ENST00000343053 MYL1P05976 194 aa26.75■■□□□ 1.87
NELFB-201ENST00000343053 LEKR1Q6ZMV7 388 aa26.75■■□□□ 1.87
NELFB-201ENST00000343053 EIF3CQ99613 913 aaKnown RBP26.75■■□□□ 1.87
NELFB-201ENST00000343053 C7orf25Q9BPX7 421 aa26.75■■□□□ 1.87
NELFB-201ENST00000343053 DNA2P51530 1060 aa26.74■■□□□ 1.87
NELFB-201ENST00000343053 GRB10Q13322 594 aa26.74■■□□□ 1.87
NELFB-201ENST00000343053 GALNT17Q6IS24 598 aa26.74■■□□□ 1.87
NELFB-201ENST00000343053 GOLGA5Q8TBA6 731 aa26.74■■□□□ 1.87
NELFB-201ENST00000343053 NOC3LQ8WTT2 800 aaKnown RBP26.74■■□□□ 1.87
NELFB-201ENST00000343053 COG1Q8WTW3 980 aa26.74■■□□□ 1.87
NELFB-201ENST00000343053 HDAC7Q8WUI4 952 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms