RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 CRLF3Q8IUI8 442 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 B4GALNT2Q8NHY0 566 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 TMOD1P28289 359 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 SF3A3Q12874 501 aaKnown RBP eCLIP19.1■□□□□ 0.65
SMAD4-201ENST00000342988 TADA1Q96BN2 335 aa19.1■□□□□ 0.65
SMAD4-201ENST00000342988 NSD2O96028 1365 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 FANCCQ00597 558 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 ARMC2Q8NEN0 867 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.09■□□□□ 0.65
SMAD4-201ENST00000342988 MMTAG2Q9BU76 263 aaKnown RBP19.09■□□□□ 0.65
SMAD4-201ENST00000342988 PKD2L1Q9P0L9 805 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 NCF2P19878 526 aaPredicted RBP19.09■□□□□ 0.65
SMAD4-201ENST00000342988 STAT2P52630 851 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 MBIPQ9NS73 344 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 C9orf84Q5VXU9 1444 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 FAM133BQ5BKY9 247 aaKnown RBP19.09■□□□□ 0.65
SMAD4-201ENST00000342988 CATSPER1Q8NEC5 780 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 ESYT1Q9BSJ8 1104 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 KIAA1107Q9UPP5 1409 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 XPOTO43592 962 aaKnown RBP19.09■□□□□ 0.65
SMAD4-201ENST00000342988 BPIFB4P59827 614 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 SCG2P13521 617 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 RRAGAQ7L523 313 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 BTN2A2Q8WVV5 523 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 DTNBP1Q96EV8 351 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 NUP62P37198 522 aaPredicted RBP19.09■□□□□ 0.65
SMAD4-201ENST00000342988 MORF4L2Q15014 288 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 TCP11Q8WWU5 503 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 NDE1Q9NXR1 346 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 H7C0C1 242 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 TCP1P17987 556 aaKnown RBP19.09■□□□□ 0.65
SMAD4-201ENST00000342988 ATP5OP48047 213 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 APOBRQ0VD83 1088 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 NBPF14Q5TI25 921 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 TRAF7Q6Q0C0 670 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 DEPDC1BQ8WUY9 529 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 NDEL1Q9GZM8 345 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 ZNF148Q9UQR1 794 aa19.09■□□□□ 0.65
SMAD4-201ENST00000342988 TADA2BQ86TJ2 420 aa19.08■□□□□ 0.65
SMAD4-201ENST00000342988 DNAAF3Q8N9W5 541 aa19.08■□□□□ 0.65
SMAD4-201ENST00000342988 CFAP36Q96G28 342 aa19.08■□□□□ 0.65
SMAD4-201ENST00000342988 MTRQ99707 1265 aa19.08■□□□□ 0.65
SMAD4-201ENST00000342988 CCDC151A5D8V7 595 aa19.08■□□□□ 0.65
SMAD4-201ENST00000342988 AP2B1P63010 937 aa19.08■□□□□ 0.65
SMAD4-201ENST00000342988 FAM96AQ9H5X1 160 aa19.08■□□□□ 0.65
SMAD4-201ENST00000342988 PIK3CAP42336 1068 aa19.08■□□□□ 0.65
SMAD4-201ENST00000342988 C16orf62Q7Z3J2 963 aa19.08■□□□□ 0.65
SMAD4-201ENST00000342988 IMPDH2P12268 514 aa19.08■□□□□ 0.64
SMAD4-201ENST00000342988 MIGA1Q8NAN2 632 aa19.08■□□□□ 0.64
SMAD4-201ENST00000342988 DEPTORQ8TB45 409 aa19.08■□□□□ 0.64
SMAD4-201ENST00000342988 NGLY1Q96IV0 654 aa19.08■□□□□ 0.64
SMAD4-201ENST00000342988 GUCY1A3Q02108 690 aa19.08■□□□□ 0.64
SMAD4-201ENST00000342988 GOLGA8TH3BQL2 631 aa19.08■□□□□ 0.64
SMAD4-201ENST00000342988 GOLGA8HP0CJ92 632 aa19.08■□□□□ 0.64
SMAD4-201ENST00000342988 ARHGAP18Q8N392 663 aa19.08■□□□□ 0.64
SMAD4-201ENST00000342988 RALGAPBQ86X10 1494 aa19.08■□□□□ 0.64
SMAD4-201ENST00000342988 ESRRBO95718 433 aa19.07■□□□□ 0.64
SMAD4-201ENST00000342988 AARSP49588 968 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMAD4-201ENST00000342988 ANKRD13DQ6ZTN6 518 aa19.07■□□□□ 0.64
SMAD4-201ENST00000342988 PCGF5Q86SE9 256 aa19.07■□□□□ 0.64
SMAD4-201ENST00000342988 EIF2AK4Q9P2K8 1649 aaKnown RBP19.07■□□□□ 0.64
SMAD4-201ENST00000342988 POC1B-GALNT4F8VUJ3 575 aa19.07■□□□□ 0.64
SMAD4-201ENST00000342988 TUBGCP3Q96CW5 907 aa19.07■□□□□ 0.64
SMAD4-201ENST00000342988 ZFP42Q96MM3 310 aa19.07■□□□□ 0.64
SMAD4-201ENST00000342988 LRRC9Q6ZRR7 1453 aa19.07■□□□□ 0.64
SMAD4-201ENST00000342988 ALDH1L1O75891 902 aa19.07■□□□□ 0.64
SMAD4-201ENST00000342988 ZNF174Q15697 407 aa19.07■□□□□ 0.64
SMAD4-201ENST00000342988 IBTKQ9P2D0 1353 aaPredicted RBP19.07■□□□□ 0.64
SMAD4-201ENST00000342988 ARIH2O95376 493 aa19.07■□□□□ 0.64
SMAD4-201ENST00000342988 MYCLP12524 364 aaPredicted RBP19.07■□□□□ 0.64
SMAD4-201ENST00000342988 GOLGA8IPA6NC78 632 aa19.07■□□□□ 0.64
SMAD4-201ENST00000342988 ZSCAN9O15535 394 aaPredicted RBP19.07■□□□□ 0.64
SMAD4-201ENST00000342988 BZW1Q7L1Q6 419 aaKnown RBP19.07■□□□□ 0.64
SMAD4-201ENST00000342988 ZBTB3Q9H5J0 574 aa19.07■□□□□ 0.64
SMAD4-201ENST00000342988 TOMM70O94826 608 aa19.07■□□□□ 0.64
SMAD4-201ENST00000342988 NLRP12P59046 1061 aa19.07■□□□□ 0.64
SMAD4-201ENST00000342988 PSMC1P62191 440 aaKnown RBP19.07■□□□□ 0.64
SMAD4-201ENST00000342988 MAML1Q92585 1016 aa19.07■□□□□ 0.64
SMAD4-201ENST00000342988 TMEM87BQ96K49 555 aa19.07■□□□□ 0.64
SMAD4-201ENST00000342988 LSM14BQ9BX40 385 aaKnown RBP19.07■□□□□ 0.64
SMAD4-201ENST00000342988 GRM8O00222 908 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 ZBED4O75132 1171 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 DEFA1P59665 94 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 DEFA3P59666 94 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 CIITAP33076 1130 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 SOX5P35711 763 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 GNPTABQ3T906 1256 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 HSPD1P10809 573 aaKnown RBP19.06■□□□□ 0.64
SMAD4-201ENST00000342988 AOC3Q16853 763 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 ADCK1Q86TW2 530 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 NLRX1Q86UT6 975 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 KLHL31Q9H511 634 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 LIG4P49917 911 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 KIF23Q02241 960 aaPredicted RBP19.06■□□□□ 0.64
SMAD4-201ENST00000342988 TRPV6Q9H1D0 765 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 PLEKHG3A1L390 1219 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 ESRRAP11474 423 aaPredicted RBP19.06■□□□□ 0.64
SMAD4-201ENST00000342988 ATP2B4P23634 1241 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 SLFN12Q8IYM2 578 aa19.06■□□□□ 0.64
SMAD4-201ENST00000342988 BRIP1Q9BX63 1249 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms