RNA–Protein interactions for RNA: ENST00000342669.7

SNRPD2-201, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-201ENST00000342669 LNPKQ9C0E8 428 aa11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 DDX49Q9Y6V7 483 aaKnown RBP11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 MYH6P13533 1939 aa11.87□□□□□ -0.51
SNRPD2-201ENST00000342669 CCDC171Q6TFL3 1326 aa11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 LOC102724159A0A0B4J2E5 919 aa11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 NFIBO00712 420 aa11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 PDHBP11177 359 aa11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 CYP2C18P33260 490 aa11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 ALDH5A1P51649 535 aaPredicted RBP11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 AAMPQ13685 434 aa11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 PWP2Q15269 919 aaKnown RBP11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 ZNF365Q70YC5 407 aa11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 C16orf59Q7L2K0 433 aa11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 MPHOSPH6Q99547 160 aaKnown RBP11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 MTIF3Q9H2K0 278 aaKnown RBP11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 HIPK3Q9H422 1215 aa11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 RNF41Q9H4P4 317 aaPredicted RBP11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 ZNF576Q9H609 170 aa11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 IL23AQ9NPF7 189 aa11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 U3KPZ7 1027 aaPredicted RBP11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 GBF1Q92538 1859 aa11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 LAMA4Q16363 1823 aa11.86□□□□□ -0.51
SNRPD2-201ENST00000342669 PTGS1P23219 599 aa11.85□□□□□ -0.51
SNRPD2-201ENST00000342669 CALML3P27482 149 aa11.85□□□□□ -0.51
SNRPD2-201ENST00000342669 ZNF543Q08ER8 600 aa11.85□□□□□ -0.51
SNRPD2-201ENST00000342669 GRIN2CQ14957 1233 aa11.85□□□□□ -0.51
SNRPD2-201ENST00000342669 DUSP28Q4G0W2 176 aa11.85□□□□□ -0.51
SNRPD2-201ENST00000342669 RASIP1Q5U651 963 aa11.85□□□□□ -0.51
SNRPD2-201ENST00000342669 B4GALNT3Q6L9W6 998 aa11.85□□□□□ -0.51
SNRPD2-201ENST00000342669 RNF207Q6ZRF8 634 aa11.85□□□□□ -0.51
SNRPD2-201ENST00000342669 ESR2Q92731 530 aa11.85□□□□□ -0.51
SNRPD2-201ENST00000342669 WDR11Q9BZH6 1224 aa11.85□□□□□ -0.51
SNRPD2-201ENST00000342669 TRPV6Q9H1D0 765 aa11.85□□□□□ -0.51
SNRPD2-201ENST00000342669 RWDD1Q9H446 243 aaPredicted RBP11.85□□□□□ -0.51
SNRPD2-201ENST00000342669 POLR3EQ9NVU0 708 aa11.85□□□□□ -0.51
SNRPD2-201ENST00000342669 GRIN2DO15399 1336 aa11.85□□□□□ -0.51
SNRPD2-201ENST00000342669 B4DLN1 442 aa11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 ZNF213O14771 459 aa11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 B4GALT4O60513 344 aa11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 FGBP02675 491 aa11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 SDSP20132 328 aa11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 CPT1AP50416 773 aa11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 MRPL12P52815 198 aaKnown RBP11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 PSMC6P62333 389 aa11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 PDE4DQ08499 809 aa11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 BRDTQ58F21 947 aaPredicted RBP11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 TMEM63BQ5T3F8 832 aa11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 TBC1D10CQ8IV04 446 aa11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 RPUSD2Q8IZ73 545 aaKnown RBP11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 OR6J1Q8NGC5 347 aa11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 CLEC4DQ8WXI8 215 aa11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 HERVK_113Q902F9 699 aa11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 PBX4Q9BYU1 374 aa11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 GPHNQ9NQX3 736 aaPredicted RBP11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 MSRAQ9UJ68 235 aa11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 WDR19Q8NEZ3 1342 aa11.84□□□□□ -0.51
SNRPD2-201ENST00000342669 RBM47A0AV96 593 aaKnown RBP11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 GRXCR1A8MXD5 290 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 NKRFO15226 690 aaKnown RBP eCLIP11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 MYL3P08590 195 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 SUPT20HL2P0C7V6 817 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 SNHG28P0DPA3 235 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 PBX2P40425 430 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 NT5C2P49902 561 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 CCL23P55773 120 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 RPS6P62753 249 aaKnown RBP11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 RAB30Q15771 203 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 CCDC178Q5BJE1 867 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 GPATCH4Q5T3I0 446 aaKnown RBP11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 SLC30A10Q6XR72 485 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 CHD1LQ86WJ1 897 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 IQCA1Q86XH1 822 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 SMC5Q8IY18 1101 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 DNERQ8NFT8 737 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 GAS2L1Q99501 681 aaPredicted RBP11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 ZKSCAN3Q9BRR0 538 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 MTG1Q9BT17 334 aaPredicted RBP11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 NOC4LQ9BVI4 516 aaKnown RBP11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 SCN10AQ9Y5Y9 1956 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 NEDD4P46934 1319 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 UMODL1Q5DID0 1318 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 RAD50Q92878 1312 aa11.83□□□□□ -0.52
SNRPD2-201ENST00000342669 TRIP12Q14669 1992 aaPredicted RBP11.82□□□□□ -0.52
SNRPD2-201ENST00000342669 HIP1O00291 1037 aa11.82□□□□□ -0.52
SNRPD2-201ENST00000342669 KPNA6O60684 536 aa11.82□□□□□ -0.52
SNRPD2-201ENST00000342669 GOLGA8HP0CJ92 632 aa11.82□□□□□ -0.52
SNRPD2-201ENST00000342669 PPP2R5BQ15173 497 aa11.82□□□□□ -0.52
SNRPD2-201ENST00000342669 USH1GQ495M9 461 aa11.82□□□□□ -0.52
SNRPD2-201ENST00000342669 CWC27Q6UX04 472 aaKnown RBP11.82□□□□□ -0.52
SNRPD2-201ENST00000342669 OTOP2Q7RTS6 562 aa11.82□□□□□ -0.52
SNRPD2-201ENST00000342669 DGKHQ86XP1 1220 aa11.82□□□□□ -0.52
SNRPD2-201ENST00000342669 PLEKHM2Q8IWE5 1019 aa11.82□□□□□ -0.52
SNRPD2-201ENST00000342669 SCFD2Q8WU76 684 aa11.82□□□□□ -0.52
SNRPD2-201ENST00000342669 ALDH8A1Q9H2A2 487 aaPredicted RBP11.82□□□□□ -0.52
SNRPD2-201ENST00000342669 DIAPH3Q9NSV4 1193 aa11.82□□□□□ -0.52
SNRPD2-201ENST00000342669 CXXC1Q9P0U4 656 aaPredicted RBP11.82□□□□□ -0.52
SNRPD2-201ENST00000342669 KIAA1217Q5T5P2 1943 aa11.82□□□□□ -0.52
SNRPD2-201ENST00000342669 SCN5AQ14524 2016 aa11.81□□□□□ -0.52
SNRPD2-201ENST00000342669 EDNRBP24530 442 aa11.81□□□□□ -0.52
SNRPD2-201ENST00000342669 PURAQ00577 322 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms