RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 RBBP6Q7Z6E9 1792 aaKnown RBP12.06□□□□□ -0.48
TPM3-207ENST00000341372 NMT2O60551 498 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 HOXD10P28358 340 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 RBL2Q08999 1139 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 FUT2Q10981 343 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 EML3Q32P44 896 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 LRRC47Q8N1G4 583 aaKnown RBP12.06□□□□□ -0.48
TPM3-207ENST00000341372 MB21D1Q8N884 522 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 ESR2Q92731 530 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 LSG1Q9H089 658 aaKnown RBP12.06□□□□□ -0.48
TPM3-207ENST00000341372 HOXC10Q9NYD6 342 aa12.06□□□□□ -0.48
TPM3-207ENST00000341372 FAM83BQ5T0W9 1011 aa12.05□□□□□ -0.48
TPM3-207ENST00000341372 TRAF7Q6Q0C0 670 aa12.05□□□□□ -0.48
TPM3-207ENST00000341372 SIX5Q8N196 739 aa12.05□□□□□ -0.48
TPM3-207ENST00000341372 BTBD7Q9P203 1132 aa12.05□□□□□ -0.48
TPM3-207ENST00000341372 PPP1R9AQ9ULJ8 1098 aa12.05□□□□□ -0.48
TPM3-207ENST00000341372 PTCH2Q9Y6C5 1203 aa12.05□□□□□ -0.48
TPM3-207ENST00000341372 TNPO2O14787 897 aaKnown RBP12.04□□□□□ -0.48
TPM3-207ENST00000341372 PEX10O60683 326 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 CDC45O75419 566 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 FLOT1O75955 427 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 CYP21A2P08686 494 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 Q3C1V9 767 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 RRP12Q5JTH9 1297 aaKnown RBP12.04□□□□□ -0.48
TPM3-207ENST00000341372 RCSD1Q6JBY9 416 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 PPP1R18Q6NYC8 613 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 GMCL1Q96IK5 515 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 PAGR1Q9BTK6 254 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 TOMM22Q9NS69 142 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 MAPK4P31152 587 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 PRKCZQ05513 592 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 REPS2Q8NFH8 660 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 ATG4CQ96DT6 458 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 TTC14Q96N46 770 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 CNNM2Q9H8M5 875 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 METTL14Q9HCE5 456 aaKnown RBP12.04□□□□□ -0.48
TPM3-207ENST00000341372 METTL5Q9NRN9 209 aaKnown RBP12.04□□□□□ -0.48
TPM3-207ENST00000341372 STX8Q9UNK0 236 aa12.04□□□□□ -0.48
TPM3-207ENST00000341372 PARNO95453 639 aaKnown RBP12.03□□□□□ -0.48
TPM3-207ENST00000341372 TOP1P11387 765 aaKnown RBP12.03□□□□□ -0.48
TPM3-207ENST00000341372 CCNA1P78396 465 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 ANKS1AQ92625 1134 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 COA7Q96BR5 231 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 NUP88Q99567 741 aaPredicted RBP12.03□□□□□ -0.48
TPM3-207ENST00000341372 KRT23Q9C075 422 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 PORCNQ9H237 461 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 FBXO28Q9NVF7 368 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 DMGDHQ9UI17 866 aaKnown RBP12.03□□□□□ -0.48
TPM3-207ENST00000341372 GJD2Q9UKL4 321 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 GABRQQ9UN88 632 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 RBM8AQ9Y5S9 174 aaKnown RBP12.03□□□□□ -0.48
TPM3-207ENST00000341372 B4E1Z4 1266 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 TREHO43280 583 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 TPD52L2O43399 206 aaKnown RBP12.03□□□□□ -0.48
TPM3-207ENST00000341372 PLA2G6O60733 806 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 CCDC178Q5BJE1 867 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 SLFN13Q68D06 897 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 DGKHQ86XP1 1220 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 SHCBP1Q8NEM2 672 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 DUSP9Q99956 384 aaKnown RBP12.03□□□□□ -0.48
TPM3-207ENST00000341372 SLF1Q9BQI6 1058 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 TMEM47Q9BQJ4 181 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 SPATC1LQ9H0A9 340 aa12.03□□□□□ -0.48
TPM3-207ENST00000341372 SFI1A8K8P3 1242 aa12.02□□□□□ -0.49
TPM3-207ENST00000341372 VWA5AO00534 786 aa12.02□□□□□ -0.49
TPM3-207ENST00000341372 ATMINO43313 823 aaPredicted RBP12.02□□□□□ -0.49
TPM3-207ENST00000341372 BMP3P12645 472 aa12.02□□□□□ -0.49
TPM3-207ENST00000341372 FLT3LGP49771 235 aa12.02□□□□□ -0.49
TPM3-207ENST00000341372 SEC13P55735 322 aa12.02□□□□□ -0.49
TPM3-207ENST00000341372 ZNF746Q6NUN9 644 aaPredicted RBP12.02□□□□□ -0.49
TPM3-207ENST00000341372 KIAA1211Q6ZU35 1233 aa12.02□□□□□ -0.49
TPM3-207ENST00000341372 GPR142Q7Z601 462 aa12.02□□□□□ -0.49
TPM3-207ENST00000341372 SOCS4Q8WXH5 440 aa12.02□□□□□ -0.49
TPM3-207ENST00000341372 USP6NLQ92738 828 aa12.02□□□□□ -0.49
TPM3-207ENST00000341372 ZNF333Q96JL9 665 aa12.02□□□□□ -0.49
TPM3-207ENST00000341372 PURBQ96QR8 312 aaKnown RBP12.02□□□□□ -0.49
TPM3-207ENST00000341372 MOV10L1Q9BXT6 1211 aaKnown RBP12.02□□□□□ -0.49
TPM3-207ENST00000341372 RBCK1Q9BYM8 510 aa12.02□□□□□ -0.49
TPM3-207ENST00000341372 FEM1BQ9UK73 627 aa12.02□□□□□ -0.49
TPM3-207ENST00000341372 ZNF214Q9UL59 606 aaPredicted RBP12.02□□□□□ -0.49
TPM3-207ENST00000341372 SNHG28P0DPA3 235 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 ATP1A2P50993 1020 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 MORN1Q5T089 497 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 CASC1Q6TDU7 716 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 STOX1Q6ZVD7 989 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 IQCA1Q86XH1 822 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 TRIM50Q86XT4 487 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 PRPF38AQ8NAV1 312 aaKnown RBP12.01□□□□□ -0.49
TPM3-207ENST00000341372 DCAF4Q8WV16 495 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 ZSWIM5Q9P217 1185 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 TAF6LQ9Y6J9 622 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 KIAA0100Q14667 2235 aaKnown RBP12.01□□□□□ -0.49
TPM3-207ENST00000341372 E7EWF7 191 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 ATP2A1O14983 1001 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 ZNF76P36508 570 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 SLC1A4P43007 532 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 TMEM132BQ14DG7 1078 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 NECTIN1Q15223 517 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 SLC9C1Q4G0N8 1177 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 PLEKHH3Q7Z736 793 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms