RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 DNAJC7Q99615 494 aa12.03□□□□□ -0.48
TRAF3IP2-201ENST00000340026 SCN9AQ15858 1988 aa12.02□□□□□ -0.48
TRAF3IP2-201ENST00000340026 CALCRLQ16602 461 aa12.02□□□□□ -0.48
TRAF3IP2-201ENST00000340026 CENPPQ6IPU0 288 aa12.02□□□□□ -0.48
TRAF3IP2-201ENST00000340026 CYP26C1Q6V0L0 522 aa12.02□□□□□ -0.48
TRAF3IP2-201ENST00000340026 UNC13DQ70J99 1090 aa12.02□□□□□ -0.48
TRAF3IP2-201ENST00000340026 ADGRF4Q8IZF3 695 aa12.02□□□□□ -0.48
TRAF3IP2-201ENST00000340026 CUL5Q93034 780 aa12.02□□□□□ -0.48
TRAF3IP2-201ENST00000340026 P2RX5Q93086 422 aa12.02□□□□□ -0.48
TRAF3IP2-201ENST00000340026 CDK17Q00537 523 aa12.02□□□□□ -0.49
TRAF3IP2-201ENST00000340026 DACT2Q5SW24 774 aa12.02□□□□□ -0.49
TRAF3IP2-201ENST00000340026 MB21D1Q8N884 522 aa12.02□□□□□ -0.49
TRAF3IP2-201ENST00000340026 GMCL1P1Q8NEA9 526 aa12.02□□□□□ -0.49
TRAF3IP2-201ENST00000340026 STAMQ92783 540 aa12.02□□□□□ -0.49
TRAF3IP2-201ENST00000340026 TTYH3Q9C0H2 523 aa12.02□□□□□ -0.49
TRAF3IP2-201ENST00000340026 OGFRQ9NZT2 677 aa12.02□□□□□ -0.49
TRAF3IP2-201ENST00000340026 PI4KBQ9UBF8 816 aa12.02□□□□□ -0.49
TRAF3IP2-201ENST00000340026 DDX41Q9UJV9 622 aaKnown RBP12.02□□□□□ -0.49
TRAF3IP2-201ENST00000340026 MRFAP1Q9Y605 127 aa12.02□□□□□ -0.49
TRAF3IP2-201ENST00000340026 MYH7BA7E2Y1 1941 aa12.02□□□□□ -0.49
TRAF3IP2-201ENST00000340026 A0A1W2PQJ5 194 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 PP2D1A8MPX8 630 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 TADA3O75528 432 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 CASP14P31944 242 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 MMP14P50281 582 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 FXR1P51114 621 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 USP11P51784 963 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 GRB10Q13322 594 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 MEA1Q16626 185 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 RAD9BQ6WBX8 426 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 POTEDQ86YR6 584 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 UBE2Q2Q8WVN8 375 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 DUSP9Q99956 384 aaKnown RBP12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 KANSL2Q9H9L4 492 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 BLOC1S4Q9NUP1 217 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 CAPN11Q9UMQ6 739 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 STK24Q9Y6E0 443 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 ENTPD3O75355 529 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 CDC25AP30304 524 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 AP3B2Q13367 1082 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 HSP90AA4PQ58FG1 418 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 SV2BQ7L1I2 683 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 GUF1Q8N442 669 aaKnown RBP12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 CRYGNQ8WXF5 182 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 GMCL1Q96IK5 515 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 ERGIC2Q96RQ1 377 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 EXOC1Q9NV70 894 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 KDM3AQ9Y4C1 1321 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 RIMBP2O15034 1052 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 CASQ1P31415 396 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 PICALMQ13492 652 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 ZNF772Q68DY9 489 aaPredicted RBP12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 C7orf43Q8WVR3 580 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 PNMA5Q96PV4 448 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 UBA5Q9GZZ9 404 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 DNAJC18Q9H819 358 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 BIN2Q9UBW5 565 aaPredicted RBP12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 LRWD1Q9UFC0 647 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 SLX4Q8IY92 1834 aa12.01□□□□□ -0.49
TRAF3IP2-201ENST00000340026 ATAD5Q96QE3 1844 aa12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 ATP8B1O43520 1251 aa12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 PPP1R11O60927 126 aaPredicted RBP12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 LRRC63Q05C16 580 aa12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 GOLGA8FQ08AF8 430 aa12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 GOLGA8DPQ0D2H9 430 aa12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 TMEM179Q6ZVK1 233 aa12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 SMAP1Q8IYB5 467 aaPredicted RBP12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 LRRC47Q8N1G4 583 aaKnown RBP12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 RASSF8Q8NHQ8 419 aa12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 LARP4BQ92615 738 aaKnown RBP12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 RAD54LQ92698 747 aa12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 CPVLQ9H3G5 476 aa12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 TBX3O15119 743 aa12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 FGFR1OPO95684 399 aaKnown RBP12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 MMP10P09238 476 aa12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 PMS1P54277 932 aaKnown RBP12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 BTNL9Q6UXG8 535 aa12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 NT5C3AQ9H0P0 336 aa12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 MAGEC2Q9UBF1 373 aaPredicted RBP12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 KIF13BQ9NQT8 1826 aa12□□□□□ -0.49
TRAF3IP2-201ENST00000340026 FRMPD2Q68DX3 1309 aaPredicted RBP11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 SOWAHDA6NJG2 315 aa11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 HNRNPH3P31942 346 aaKnown RBP11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 TECP42680 631 aa11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 PDE4DQ08499 809 aa11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 JAKMIP3Q5VZ66 844 aa11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 SUPT20HQ8NEM7 779 aa11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 OR8K1Q8NGG5 319 aa11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 CNKSR1Q969H4 720 aa11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 TRIM47Q96LD4 638 aa11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 MRPL44Q9H9J2 332 aaKnown RBP11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 KCNMB3Q9NPA1 279 aa11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 SLC37A4O43826 429 aa11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 GNG11P61952 73 aa11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 ERVK-24P63145 666 aa11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 KRT79Q5XKE5 535 aa11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 RSRC2Q7L4I2 434 aaKnown RBP11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 KIAA0895Q8NCT3 520 aa11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 COA7Q96BR5 231 aa11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 TAB2Q9NYJ8 693 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms