RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 PDXDC2PQ6P474 469 aa12.87□□□□□ -0.35
ZNF648-201ENST00000339948 EP400NLQ6ZTU2 488 aa12.87□□□□□ -0.35
ZNF648-201ENST00000339948 TICAM2Q86XR7 235 aa12.87□□□□□ -0.35
ZNF648-201ENST00000339948 ADSSL1Q8N142 457 aa12.87□□□□□ -0.35
ZNF648-201ENST00000339948 P2RX5Q93086 422 aa12.87□□□□□ -0.35
ZNF648-201ENST00000339948 DPH5Q9H2P9 285 aa12.87□□□□□ -0.35
ZNF648-201ENST00000339948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.87□□□□□ -0.35
ZNF648-201ENST00000339948 STIM2Q9P246 746 aa12.87□□□□□ -0.35
ZNF648-201ENST00000339948 CAPN11Q9UMQ6 739 aa12.87□□□□□ -0.35
ZNF648-201ENST00000339948 KCNK3O14649 394 aa12.87□□□□□ -0.35
ZNF648-201ENST00000339948 TSPY3P0CV98 308 aa12.87□□□□□ -0.35
ZNF648-201ENST00000339948 TSPY8P0CW00 308 aa12.87□□□□□ -0.35
ZNF648-201ENST00000339948 GUCY2CP25092 1073 aa12.87□□□□□ -0.35
ZNF648-201ENST00000339948 ZBED6P86452 979 aa12.87□□□□□ -0.35
ZNF648-201ENST00000339948 RNPC3Q96LT9 517 aaKnown RBP12.87□□□□□ -0.35
ZNF648-201ENST00000339948 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.87□□□□□ -0.35
ZNF648-201ENST00000339948 SNX12Q9UMY4 172 aa12.87□□□□□ -0.35
ZNF648-201ENST00000339948 HYOU1Q9Y4L1 999 aa12.87□□□□□ -0.35
ZNF648-201ENST00000339948 PRPF6O94906 941 aaKnown RBP12.86□□□□□ -0.35
ZNF648-201ENST00000339948 USP8P40818 1118 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 CCDC152Q4G0S7 254 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 PNMA1Q8ND90 353 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 EIF4E1BA6NMX2 242 aaKnown RBP12.86□□□□□ -0.35
ZNF648-201ENST00000339948 EIF3HO15372 352 aaKnown RBP eCLIP12.86□□□□□ -0.35
ZNF648-201ENST00000339948 TMOD1P28289 359 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 PRDX5P30044 214 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 KIF5BP33176 963 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
ZNF648-201ENST00000339948 CCDC91Q7Z6B0 441 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 ZNF444Q8N0Y2 327 aaPredicted RBP12.86□□□□□ -0.35
ZNF648-201ENST00000339948 SPATA20Q8TB22 786 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 CALML4Q96GE6 196 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 ADAMTS1Q9UHI8 967 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 OVOS2A0A0G2JMS6 1433 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 NALCNQ8IZF0 1738 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 ABCC12Q96J65 1359 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 TNNI2P48788 182 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 TROAPQ12815 778 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 SH3RF1Q7Z6J0 888 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 TBC1D31Q96DN5 1066 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 NOX5Q96PH1 765 aa12.86□□□□□ -0.35
ZNF648-201ENST00000339948 RBM28Q9NW13 759 aaKnown RBP12.86□□□□□ -0.35
ZNF648-201ENST00000339948 ERVV-2B6SEH9 535 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 GLI1P08151 1106 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 SF3B2Q13435 895 aaKnown RBP12.85□□□□□ -0.35
ZNF648-201ENST00000339948 KIAA0753Q2KHM9 967 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 CCDC121Q6ZUS5 278 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 TBC1D5Q92609 795 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 CHD2O14647 1828 aaKnown RBP12.85□□□□□ -0.35
ZNF648-201ENST00000339948 ZNF263O14978 683 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 SEMA3EO15041 775 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 PALMO75781 387 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 EEF1GP26641 437 aaKnown RBP12.85□□□□□ -0.35
ZNF648-201ENST00000339948 HDLBPQ00341 1268 aaKnown RBP12.85□□□□□ -0.35
ZNF648-201ENST00000339948 TTMPQ5BVD1 217 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 AMOTL1Q8IY63 956 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 MYH8P13535 1937 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 LTN1O94822 1766 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 NR1D1P20393 614 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 CFAP221Q4G0U5 840 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 FAM114A1Q8IWE2 563 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 IFT20Q8IY31 132 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 GLIS3Q8NEA6 775 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 SELENOSQ9BQE4 189 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 ARHGAP20Q9P2F6 1191 aa12.85□□□□□ -0.35
ZNF648-201ENST00000339948 ITIH6Q6UXX5 1313 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 MROH5Q6ZUA9 1318 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 KLRK1P26718 216 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 EPHB4P54760 987 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 SEC23AQ15436 765 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 CPLX4Q7Z7G2 160 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 LSM14BQ9BX40 385 aaKnown RBP12.84□□□□□ -0.35
ZNF648-201ENST00000339948 CRNKL1Q9BZJ0 848 aaKnown RBP12.84□□□□□ -0.35
ZNF648-201ENST00000339948 NDST4Q9H3R1 872 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 BICDL2A1A5D9 508 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 POTEMA6NI47 508 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 GOLGA8KD6RF30 607 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 CLSTN1O94985 981 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 CALML3P27482 149 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 ATP6V1AP38606 617 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 ALX1Q15699 326 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 MAPKAPK5Q8IW41 473 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 FAM133AQ8N9E0 248 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 GPR101Q96P66 508 aaPredicted RBP12.84□□□□□ -0.35
ZNF648-201ENST00000339948 SPAG5Q96R06 1193 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 CRYBG1Q9Y4K1 1723 aa12.84□□□□□ -0.35
ZNF648-201ENST00000339948 BUB1BO60566 1050 aaPredicted RBP12.83□□□□□ -0.35
ZNF648-201ENST00000339948 USP17L2Q6R6M4 530 aa12.83□□□□□ -0.35
ZNF648-201ENST00000339948 CREG2Q8IUH2 290 aa12.83□□□□□ -0.35
ZNF648-201ENST00000339948 MTMR8Q96EF0 704 aa12.83□□□□□ -0.35
ZNF648-201ENST00000339948 CABS1Q96KC9 395 aa12.83□□□□□ -0.35
ZNF648-201ENST00000339948 TMEM260Q9NX78 707 aa12.83□□□□□ -0.35
ZNF648-201ENST00000339948 GGT7Q9UJ14 662 aa12.83□□□□□ -0.35
ZNF648-201ENST00000339948 SALL4Q9UJQ4 1053 aa12.83□□□□□ -0.35
ZNF648-201ENST00000339948 PLAAQ9Y263 795 aa12.83□□□□□ -0.35
ZNF648-201ENST00000339948 CALM1P0DP23 149 aa12.83□□□□□ -0.36
ZNF648-201ENST00000339948 CALM2P0DP24 149 aa12.83□□□□□ -0.36
ZNF648-201ENST00000339948 CALM3P0DP25 149 aa12.83□□□□□ -0.36
ZNF648-201ENST00000339948 CTNNA1P35221 906 aaKnown RBP12.83□□□□□ -0.36
ZNF648-201ENST00000339948 LONP1P36776 959 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms