RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 SLCO1A2P46721 670 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 MECOMQ03112 1051 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 CEP55Q53EZ4 464 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 EPB41L5Q9HCM4 733 aa13.93□□□□□ -0.18
USP47-202ENST00000339865 TRIM67Q6ZTA4 783 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 LRRC8AQ8IWT6 810 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 THOC1Q96FV9 657 aaKnown RBP13.92□□□□□ -0.18
USP47-202ENST00000339865 CHPF2Q9P2E5 772 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 FGD6Q6ZV73 1430 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 TMEM247A6NEH6 219 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 EIF3CLB5ME19 914 aaKnown RBP13.92□□□□□ -0.18
USP47-202ENST00000339865 TMED10P49755 219 aaKnown RBP13.92□□□□□ -0.18
USP47-202ENST00000339865 PDE6CP51160 858 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 YWHAHQ04917 246 aaPredicted RBP13.92□□□□□ -0.18
USP47-202ENST00000339865 EHHADHQ08426 723 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 ICA1LQ8NDH6 482 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 B4E1Z4 1266 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 PLCG2P16885 1265 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 NSFP46459 744 aaKnown RBP13.92□□□□□ -0.18
USP47-202ENST00000339865 BBOF1Q8ND07 529 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 NUDT16Q96DE0 195 aaKnown RBP13.92□□□□□ -0.18
USP47-202ENST00000339865 DEXIO95424 95 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 DPY19L2Q6NUT2 758 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 RGS9BPQ6ZS82 235 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.92□□□□□ -0.18
USP47-202ENST00000339865 DDX17Q92841 729 aaKnown RBP13.92□□□□□ -0.18
USP47-202ENST00000339865 KLC2Q9H0B6 622 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 WDR47O94967 919 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 SEC31AO94979 1220 aaKnown RBP13.92□□□□□ -0.18
USP47-202ENST00000339865 CXCR5P32302 372 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 DNM2P50570 870 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 STAT2P52630 851 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 CFAP36Q96G28 342 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 ABHD8Q96I13 439 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 ASCC2Q9H1I8 757 aaPredicted RBP13.92□□□□□ -0.18
USP47-202ENST00000339865 TMOD1P28289 359 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 PUM3Q15397 648 aaKnown RBP13.92□□□□□ -0.18
USP47-202ENST00000339865 ADCK1Q86TW2 530 aa13.92□□□□□ -0.18
USP47-202ENST00000339865 ALKBH8Q96BT7 664 aaKnown RBP13.92□□□□□ -0.18
USP47-202ENST00000339865 YWHAEP62258 255 aaKnown RBP13.91□□□□□ -0.18
USP47-202ENST00000339865 TTC38Q5R3I4 469 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 KCNV2Q8TDN2 545 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 TLK1Q9UKI8 766 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 KCNJ18B7U540 433 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 SERPINB2P05120 415 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 TCP1P17987 556 aaKnown RBP13.91□□□□□ -0.18
USP47-202ENST00000339865 HDAC1Q13547 482 aaPredicted RBP13.91□□□□□ -0.18
USP47-202ENST00000339865 KCNJ12Q14500 433 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 LLGL1Q15334 1064 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 NCOA5Q9HCD5 579 aaKnown RBP13.91□□□□□ -0.18
USP47-202ENST00000339865 C6orf203Q9P0P8 240 aaPredicted RBP13.91□□□□□ -0.18
USP47-202ENST00000339865 CROCCQ5TZA2 2017 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 HSPD1P10809 573 aaKnown RBP13.91□□□□□ -0.18
USP47-202ENST00000339865 ACTR5Q9H9F9 607 aaPredicted RBP13.91□□□□□ -0.18
USP47-202ENST00000339865 IFNA8P32881 189 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 AFAP1Q8N556 730 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 FAM167BQ9BTA0 163 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 GEMIN8Q9NWZ8 242 aaKnown RBP13.91□□□□□ -0.18
USP47-202ENST00000339865 PPP2R2CQ9Y2T4 447 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 KDM2BQ8NHM5 1336 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 ADCY3O60266 1144 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 LZTS3O60299 673 aaPredicted RBP13.91□□□□□ -0.18
USP47-202ENST00000339865 TBC1D1Q86TI0 1168 aaPredicted RBP13.91□□□□□ -0.18
USP47-202ENST00000339865 TLK2Q86UE8 772 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 TPH2Q8IWU9 490 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 PA2G4Q9UQ80 394 aaKnown RBP13.91□□□□□ -0.18
USP47-202ENST00000339865 CCDC61Q9Y6R9 512 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 TTI1O43156 1089 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 FAM173BQ6P4H8 233 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 ZNF513Q8N8E2 541 aaPredicted RBP13.91□□□□□ -0.18
USP47-202ENST00000339865 POLIQ9UNA4 740 aa13.91□□□□□ -0.18
USP47-202ENST00000339865 LDHBP07195 334 aaKnown RBP13.9□□□□□ -0.18
USP47-202ENST00000339865 XPAP23025 273 aaPredicted RBP13.9□□□□□ -0.18
USP47-202ENST00000339865 GRIN1Q05586 938 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 SPOPLQ6IQ16 392 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 DEPDC1BQ8WUY9 529 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 RPS6KC1Q96S38 1066 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 CCPG1Q9ULG6 757 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 TTC1Q99614 292 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 ZC3H12CQ9C0D7 883 aaKnown RBP13.9□□□□□ -0.18
USP47-202ENST00000339865 POLE3Q9NRF9 147 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 DISC1Q9NRI5 854 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 NR1I2O75469 434 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 MESDQ14696 234 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 MCTP2Q6DN12 878 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 HACE1Q8IYU2 909 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 OR9Q1Q8NGQ5 310 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 L3MBTL1Q9Y468 752 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 PSDA5PKW4 1024 aaPredicted RBP13.9□□□□□ -0.18
USP47-202ENST00000339865 FAM83GA6ND36 823 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 GADD45BO75293 160 aaPredicted RBP13.9□□□□□ -0.18
USP47-202ENST00000339865 SEPT2Q15019 361 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 SH3GL1Q99961 368 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 USP26Q9BXU7 913 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 ENC1O14682 589 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 CHGBP05060 677 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 DLATP10515 647 aaKnown RBP13.9□□□□□ -0.18
USP47-202ENST00000339865 SERPINB10P48595 397 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 RASSF7Q02833 373 aa13.9□□□□□ -0.18
USP47-202ENST00000339865 PHF21AQ96BD5 680 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms