RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 ABL1P00519 1130 aa16.87■□□□□ 0.29
TNFSF13-201ENST00000338784 SERPINB2P05120 415 aa16.87■□□□□ 0.29
TNFSF13-201ENST00000338784 FAM193AP78312 1265 aa16.87■□□□□ 0.29
TNFSF13-201ENST00000338784 FAM114A1Q8IWE2 563 aa16.87■□□□□ 0.29
TNFSF13-201ENST00000338784 TBC1D16Q8TBP0 767 aa16.87■□□□□ 0.29
TNFSF13-201ENST00000338784 CALML4Q96GE6 196 aa16.87■□□□□ 0.29
TNFSF13-201ENST00000338784 TUBGCP2Q9BSJ2 902 aa16.87■□□□□ 0.29
TNFSF13-201ENST00000338784 UBA5Q9GZZ9 404 aa16.87■□□□□ 0.29
TNFSF13-201ENST00000338784 POLLQ9UGP5 575 aa16.87■□□□□ 0.29
TNFSF13-201ENST00000338784 PUF60Q9UHX1 559 aaKnown RBP16.87■□□□□ 0.29
TNFSF13-201ENST00000338784 TBC1D8O95759 1140 aa16.86■□□□□ 0.29
TNFSF13-201ENST00000338784 SRGNP10124 158 aa16.86■□□□□ 0.29
TNFSF13-201ENST00000338784 PDHBP11177 359 aa16.86■□□□□ 0.29
TNFSF13-201ENST00000338784 GYS1P13807 737 aa16.86■□□□□ 0.29
TNFSF13-201ENST00000338784 STK4Q13043 487 aa16.86■□□□□ 0.29
TNFSF13-201ENST00000338784 LRRC4BQ9NT99 713 aa16.86■□□□□ 0.29
TNFSF13-201ENST00000338784 B4DLN1 442 aa16.86■□□□□ 0.29
TNFSF13-201ENST00000338784 R3HDM1Q15032 1099 aaKnown RBP16.86■□□□□ 0.29
TNFSF13-201ENST00000338784 ANKRD40Q6AI12 368 aa16.86■□□□□ 0.29
TNFSF13-201ENST00000338784 CNNM4Q6P4Q7 775 aa16.86■□□□□ 0.29
TNFSF13-201ENST00000338784 POTEDQ86YR6 584 aa16.86■□□□□ 0.29
TNFSF13-201ENST00000338784 MMTAG2Q9BU76 263 aaKnown RBP16.86■□□□□ 0.29
TNFSF13-201ENST00000338784 NUP58Q9BVL2 599 aa16.86■□□□□ 0.29
TNFSF13-201ENST00000338784 MTMR4Q9NYA4 1195 aa16.86■□□□□ 0.29
TNFSF13-201ENST00000338784 DDX60LQ5H9U9 1706 aaKnown RBP16.85■□□□□ 0.29
TNFSF13-201ENST00000338784 CCDC151A5D8V7 595 aa16.85■□□□□ 0.29
TNFSF13-201ENST00000338784 C6orf229H3BNL8 230 aa16.85■□□□□ 0.29
TNFSF13-201ENST00000338784 POTEB2H3BUK9 544 aa16.85■□□□□ 0.29
TNFSF13-201ENST00000338784 TRIM37O94972 964 aa16.85■□□□□ 0.29
TNFSF13-201ENST00000338784 TXKP42681 527 aa16.85■□□□□ 0.29
TNFSF13-201ENST00000338784 BRD3Q15059 726 aa16.85■□□□□ 0.29
TNFSF13-201ENST00000338784 WHAMMP3Q1A5X7 153 aa16.85■□□□□ 0.29
TNFSF13-201ENST00000338784 COBLL1Q53SF7 1204 aa16.85■□□□□ 0.29
TNFSF13-201ENST00000338784 RETREG2Q8NC44 543 aa16.85■□□□□ 0.29
TNFSF13-201ENST00000338784 TMEM260Q9NX78 707 aa16.85■□□□□ 0.29
TNFSF13-201ENST00000338784 REXO2Q9Y3B8 237 aaKnown RBP16.85■□□□□ 0.29
TNFSF13-201ENST00000338784 DAGLAQ9Y4D2 1042 aa16.85■□□□□ 0.29
TNFSF13-201ENST00000338784 PLIN4Q96Q06 1357 aa16.85■□□□□ 0.29
TNFSF13-201ENST00000338784 SASH3O75995 380 aa16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 FCER1AP12319 257 aa16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 HOXA10P31260 410 aaPredicted RBP16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 TBC1D8BQ0IIM8 1120 aa16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 EZH2Q15910 746 aaKnown RBP16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 CALCRLQ16602 461 aa16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 ASPRV1Q53RT3 343 aa16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 SV2BQ7L1I2 683 aa16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 CNOT6LQ96LI5 555 aaKnown RBP16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 MTMR9Q96QG7 549 aa16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 HAUS4Q9H6D7 363 aa16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 LRWD1Q9UFC0 647 aa16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 FRMPD2Q68DX3 1309 aaPredicted RBP16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 TRIM21P19474 475 aaKnown RBP16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 ADCY7P51828 1080 aa16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 MEA1Q16626 185 aa16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 WDR59Q6PJI9 974 aa16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 TTYH3Q9C0H2 523 aa16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 GUCA1BQ9UMX6 200 aa16.84■□□□□ 0.29
TNFSF13-201ENST00000338784 MTIF2P46199 727 aaKnown RBP16.83■□□□□ 0.28
TNFSF13-201ENST00000338784 FXR2P51116 673 aaKnown RBP eCLIP16.83■□□□□ 0.28
TNFSF13-201ENST00000338784 KRT83P78385 493 aa16.83■□□□□ 0.28
TNFSF13-201ENST00000338784 PICALMQ13492 652 aa16.83■□□□□ 0.28
TNFSF13-201ENST00000338784 TMEM266Q2M3C6 531 aa16.83■□□□□ 0.28
TNFSF13-201ENST00000338784 SLC27A3Q5K4L6 730 aa16.83■□□□□ 0.28
TNFSF13-201ENST00000338784 EEF2KMTQ96G04 330 aa16.83■□□□□ 0.28
TNFSF13-201ENST00000338784 NOC4LQ9BVI4 516 aaKnown RBP16.83■□□□□ 0.28
TNFSF13-201ENST00000338784 ANKZF1Q9H8Y5 726 aa16.83■□□□□ 0.28
TNFSF13-201ENST00000338784 ZNHIT6Q9NWK9 470 aaKnown RBP16.83■□□□□ 0.28
TNFSF13-201ENST00000338784 STK17AQ9UEE5 414 aa16.83■□□□□ 0.28
TNFSF13-201ENST00000338784 CTAGE15A4D2H0 777 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 CTAGE8P0CG41 777 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 SNHG28P0DPA3 235 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 GTF2IP78347 998 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 GABPAQ06546 454 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 CTAGE6Q86UF2 777 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 CTAGE4Q8IX94 777 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 MSANTD4Q8NCY6 345 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 HNRNPLLQ8WVV9 542 aaKnown RBP16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 COA7Q96BR5 231 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 CDK5RAP3Q96JB5 506 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 CAMKK2Q96RR4 588 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 CRAMP1Q96RY5 1269 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 RAB34Q9BZG1 259 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 UBXN6Q9BZV1 441 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 MYO6Q9UM54 1294 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 APBA3O96018 575 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 ZBED6P86452 979 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 AMPD2Q01433 879 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 GRB10Q13322 594 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 LONRF2Q1L5Z9 754 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 ZSCAN29Q8IWY8 852 aaPredicted RBP16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 LRRC47Q8N1G4 583 aaKnown RBP16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 KIAA0895Q8NCT3 520 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 FUT8Q9BYC5 575 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 AGPAT5Q9NUQ2 364 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 RAB21Q9UL25 225 aa16.82■□□□□ 0.28
TNFSF13-201ENST00000338784 PVALEFA0A1B0GWK0 134 aa16.81■□□□□ 0.28
TNFSF13-201ENST00000338784 PSMD14O00487 310 aa16.81■□□□□ 0.28
TNFSF13-201ENST00000338784 AKR1B1P15121 316 aa16.81■□□□□ 0.28
TNFSF13-201ENST00000338784 CYLC1P35663 651 aaPredicted RBP16.81■□□□□ 0.28
TNFSF13-201ENST00000338784 PDIA5Q14554 519 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms