RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 PPFIA3O75145 1194 aa13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 TAL1P17542 331 aaPredicted RBP13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 XBP1P17861 261 aa13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 RPS6P62753 249 aaKnown RBP13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 MKRN4PQ13434 485 aaPredicted RBP13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 PKN1Q16512 942 aa13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 ZNF792Q3KQV3 632 aa13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 WWC2Q6AWC2 1192 aa13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 PPP1R18Q6NYC8 613 aa13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 PXYLP1Q8TE99 480 aa13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 TBC1D5Q92609 795 aa13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 GPKOWQ92917 476 aaPredicted RBP eCLIP13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 SNX21Q969T3 373 aa13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 MPHOSPH6Q99547 160 aaKnown RBP13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 APBA2Q99767 749 aa13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 SH3GLB2Q9NR46 395 aa13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 BIN2Q9UBW5 565 aaPredicted RBP13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 PTCH2Q9Y6C5 1203 aa13.71□□□□□ -0.21
SPTLC1-202ENST00000337841 STK36Q9NRP7 1315 aa13.7□□□□□ -0.22
SPTLC1-202ENST00000337841 SMCO2A6NFE2 343 aa13.7□□□□□ -0.22
SPTLC1-202ENST00000337841 CD2BP2O95400 341 aaKnown RBP13.7□□□□□ -0.22
SPTLC1-202ENST00000337841 CTDNEP1O95476 244 aa13.7□□□□□ -0.22
SPTLC1-202ENST00000337841 GRK4P32298 578 aa13.7□□□□□ -0.22
SPTLC1-202ENST00000337841 HMGN5P82970 282 aaKnown RBP13.7□□□□□ -0.22
SPTLC1-202ENST00000337841 MFSD14CQ5VZR4 134 aa13.7□□□□□ -0.22
SPTLC1-202ENST00000337841 ZNF467Q7Z7K2 595 aaPredicted RBP13.7□□□□□ -0.22
SPTLC1-202ENST00000337841 FAM177A1Q8N128 213 aaPredicted RBP13.7□□□□□ -0.22
SPTLC1-202ENST00000337841 SLAIN1Q8ND83 568 aa13.7□□□□□ -0.22
SPTLC1-202ENST00000337841 NSUN7Q8NE18 718 aaKnown RBP13.7□□□□□ -0.22
SPTLC1-202ENST00000337841 CCDC148Q8NFR7 591 aa13.7□□□□□ -0.22
SPTLC1-202ENST00000337841 SMARCC2Q8TAQ2 1214 aa13.7□□□□□ -0.22
SPTLC1-202ENST00000337841 NPLOC4Q8TAT6 608 aa13.7□□□□□ -0.22
SPTLC1-202ENST00000337841 SYTL5Q8TDW5 730 aaPredicted RBP13.7□□□□□ -0.22
SPTLC1-202ENST00000337841 C6orf50Q9HD87 102 aa13.7□□□□□ -0.22
SPTLC1-202ENST00000337841 ASB14A6NK59 587 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 STXBP3O00186 592 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 GNA11P29992 359 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 HSD17B4P51659 736 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 ADCY7P51828 1080 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 NLRP5P59047 1200 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 CNTN2Q02246 1040 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 GHRHRQ02643 423 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 OLFML2BQ68BL8 750 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 MCTP2Q6DN12 878 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 HSCBQ8IWL3 235 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 MSL3Q8N5Y2 521 aaKnown RBP13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 FAM133AQ8N9E0 248 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 FAM184AQ8NB25 1140 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 DNERQ8NFT8 737 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 BICD2Q8TD16 824 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 MAML3Q96JK9 1138 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 MCOLN1Q9GZU1 580 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 RIC8AQ9NPQ8 531 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 KIF3AQ9Y496 699 aa13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.69□□□□□ -0.22
SPTLC1-202ENST00000337841 LOC102724159A0A0B4J2E5 919 aa13.68□□□□□ -0.22
SPTLC1-202ENST00000337841 SOWAHBA6NEL2 793 aa13.68□□□□□ -0.22
SPTLC1-202ENST00000337841 PIK3CDO00329 1044 aa13.68□□□□□ -0.22
SPTLC1-202ENST00000337841 OPLAHO14841 1288 aa13.68□□□□□ -0.22
SPTLC1-202ENST00000337841 UBXN2AP68543 259 aa13.68□□□□□ -0.22
SPTLC1-202ENST00000337841 TRIM29Q14134 588 aa13.68□□□□□ -0.22
SPTLC1-202ENST00000337841 PWP2Q15269 919 aaKnown RBP13.68□□□□□ -0.22
SPTLC1-202ENST00000337841 SLC9C1Q4G0N8 1177 aa13.68□□□□□ -0.22
SPTLC1-202ENST00000337841 GALNT17Q6IS24 598 aa13.68□□□□□ -0.22
SPTLC1-202ENST00000337841 FCHSD1Q86WN1 690 aa13.68□□□□□ -0.22
SPTLC1-202ENST00000337841 NSUN6Q8TEA1 469 aaKnown RBP13.68□□□□□ -0.22
SPTLC1-202ENST00000337841 TINF2Q9BSI4 451 aa13.68□□□□□ -0.22
SPTLC1-202ENST00000337841 ALG1Q9BT22 464 aa13.68□□□□□ -0.22
SPTLC1-202ENST00000337841 ESYT2A0FGR8 921 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 K7ELQ4 463 aaPredicted RBP13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 JAK2O60674 1132 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 FOSP01100 380 aaPredicted RBP13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 HMGCRP04035 888 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 FDPSP14324 419 aaKnown RBP13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 ELNP15502 786 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 HOXA13P31271 388 aaPredicted RBP13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 ST3GAL1Q11201 340 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 CCL14Q16627 93 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 ARHGEF16Q5VV41 709 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 USP17L6PQ6QN14 398 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 MAMDC4Q6UXC1 1216 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 SLC30A10Q6XR72 485 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 TAAR1Q96RJ0 339 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 IWS1Q96ST2 819 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 RMDN3Q96TC7 470 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 ZMYND12Q9H0C1 365 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 VPS54Q9P1Q0 977 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 SMC3Q9UQE7 1217 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 A0A0G2JMZ2 1700 aa13.67□□□□□ -0.22
SPTLC1-202ENST00000337841 CASP8AP2Q9UKL3 1982 aa13.66□□□□□ -0.22
SPTLC1-202ENST00000337841 SPDYE3A6NKU9 549 aa13.66□□□□□ -0.22
SPTLC1-202ENST00000337841 MEIS2O14770 477 aa13.66□□□□□ -0.22
SPTLC1-202ENST00000337841 PDE4DQ08499 809 aa13.66□□□□□ -0.22
SPTLC1-202ENST00000337841 CUL4AQ13619 759 aa13.66□□□□□ -0.22
SPTLC1-202ENST00000337841 COL13A1Q5TAT6 717 aaPredicted RBP13.66□□□□□ -0.22
SPTLC1-202ENST00000337841 TYW1BQ6NUM6 668 aa13.66□□□□□ -0.22
SPTLC1-202ENST00000337841 TRIB2Q92519 343 aa13.66□□□□□ -0.22
SPTLC1-202ENST00000337841 PURBQ96QR8 312 aaKnown RBP13.66□□□□□ -0.22
SPTLC1-202ENST00000337841 EHMT1Q9H9B1 1298 aa13.66□□□□□ -0.22
SPTLC1-202ENST00000337841 CNPY2Q9Y2B0 182 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms