RNA–Protein interactions for RNA: ENST00000337665.8

ARHGEF1-201, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-201ENST00000337665 PPP1R11O60927 126 aaPredicted RBP16.16■□□□□ 0.18
ARHGEF1-201ENST00000337665 TTLL1O95922 423 aa16.16■□□□□ 0.18
ARHGEF1-201ENST00000337665 ZNF543Q08ER8 600 aa16.16■□□□□ 0.18
ARHGEF1-201ENST00000337665 TRIM47Q96LD4 638 aa16.16■□□□□ 0.18
ARHGEF1-201ENST00000337665 JMJD4Q9H9V9 463 aa16.16■□□□□ 0.18
ARHGEF1-201ENST00000337665 REXO2Q9Y3B8 237 aaKnown RBP16.16■□□□□ 0.18
ARHGEF1-201ENST00000337665 PPP1R2P41236 205 aa16.16■□□□□ 0.18
ARHGEF1-201ENST00000337665 PDE4DQ08499 809 aa16.16■□□□□ 0.18
ARHGEF1-201ENST00000337665 MTMR8Q96EF0 704 aa16.16■□□□□ 0.18
ARHGEF1-201ENST00000337665 CHP1Q99653 195 aa16.16■□□□□ 0.18
ARHGEF1-201ENST00000337665 RIC8AQ9NPQ8 531 aa16.16■□□□□ 0.18
ARHGEF1-201ENST00000337665 FCER1AP12319 257 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 DNM2P50570 870 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 PDIA5Q14554 519 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 BMS1Q14692 1282 aaKnown RBP16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 WDR59Q6PJI9 974 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 KIAA0895Q8NCT3 520 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 EXOC1Q9NV70 894 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 PNMA6FA0A0J9YX94 578 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 BICDL2A1A5D9 508 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 AMPD3Q01432 767 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 TUBB2AQ13885 445 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 CALCRLQ16602 461 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 CNNM4Q6P4Q7 775 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 CLEC10AQ8IUN9 316 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 ZSCAN29Q8IWY8 852 aaPredicted RBP16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 ADGRF4Q8IZF3 695 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 OR8K1Q8NGG5 319 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 RABGGTAQ92696 567 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 TUBB2BQ9BVA1 445 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 MYO1AQ9UBC5 1043 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 SERPINB13Q9UIV8 391 aa16.15■□□□□ 0.18
ARHGEF1-201ENST00000337665 GABPB1Q06547 395 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 MIIPQ5JXC2 388 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 ZNF569Q5MCW4 686 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 HHIPL2Q6UWX4 724 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 CSGALNACT2Q8N6G5 542 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 TUBGCP2Q9BSJ2 902 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 MXD3Q9BW11 206 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 USP40Q9NVE5 1235 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 STK17AQ9UEE5 414 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 CDC23Q9UJX2 597 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 TXKP42681 527 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 ASIC1P78348 528 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 MEA1Q16626 185 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 CDC42EP5Q6NZY7 148 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 CREBRFQ8IUR6 639 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 CALML4Q96GE6 196 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 EPC1Q9H2F5 836 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 TDP2O95551 362 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 PNMA6AP0CW24 399 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 PPP4R3AQ6IN85 833 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 APOBEC3HQ6NTF7 200 aaKnown RBP16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 CCDC47Q96A33 483 aaKnown RBP16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 SEMA6BQ9H3T3 888 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 GPCPD1Q9NPB8 672 aa16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 ARGLU1Q9NWB6 273 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 MAGEC2Q9UBF1 373 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF1-201ENST00000337665 MYMKA6NI61 221 aa16.13■□□□□ 0.17
ARHGEF1-201ENST00000337665 B4DLN1 442 aa16.13■□□□□ 0.17
ARHGEF1-201ENST00000337665 F8W031 263 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF1-201ENST00000337665 NDUFA10O95299 355 aa16.13■□□□□ 0.17
ARHGEF1-201ENST00000337665 CENPPQ6IPU0 288 aa16.13■□□□□ 0.17
ARHGEF1-201ENST00000337665 SLC35F6Q8N357 371 aa16.13■□□□□ 0.17
ARHGEF1-201ENST00000337665 LRWD1Q9UFC0 647 aa16.13■□□□□ 0.17
ARHGEF1-201ENST00000337665 EPN1Q9Y6I3 576 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF1-201ENST00000337665 PVALEFA0A1B0GWK0 134 aa16.13■□□□□ 0.17
ARHGEF1-201ENST00000337665 EIF6P56537 245 aaKnown RBP16.13■□□□□ 0.17
ARHGEF1-201ENST00000337665 TMEM119Q4V9L6 283 aa16.13■□□□□ 0.17
ARHGEF1-201ENST00000337665 ZNF662Q6ZS27 426 aa16.13■□□□□ 0.17
ARHGEF1-201ENST00000337665 SV2BQ7L1I2 683 aa16.13■□□□□ 0.17
ARHGEF1-201ENST00000337665 SRGAP1Q7Z6B7 1085 aa16.13■□□□□ 0.17
ARHGEF1-201ENST00000337665 GOLGA1Q92805 767 aa16.13■□□□□ 0.17
ARHGEF1-201ENST00000337665 LUC7L2Q9Y383 392 aaKnown RBP16.13■□□□□ 0.17
ARHGEF1-201ENST00000337665 NPR1P16066 1061 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 EHHADHQ08426 723 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 CNOT6LQ96LI5 555 aaKnown RBP16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 SLF1Q9BQI6 1058 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 ZC3H12CQ9C0D7 883 aaKnown RBP16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 EHD4Q9H223 541 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 ATP8B1O43520 1251 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 TTBK2Q6IQ55 1244 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 UNC13DQ70J99 1090 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 FAM114A1Q8IWE2 563 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 RETREG2Q8NC44 543 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 CTAGE9A4FU28 777 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 TRIM37O94972 964 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 PLA2G4AP47712 749 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 MCM6Q14566 821 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 TMCO3Q6UWJ1 677 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 RAD54LQ92698 747 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 HPS3Q969F9 1004 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 ERGIC2Q96RQ1 377 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 NUP58Q9BVL2 599 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 PARD6BQ9BYG5 372 aa16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 ATF5Q9Y2D1 282 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF1-201ENST00000337665 SCN9AQ15858 1988 aa16.11■□□□□ 0.17
ARHGEF1-201ENST00000337665 NKRFO15226 690 aaKnown RBP eCLIP16.11■□□□□ 0.173e-7■□□□□ 10.1
ARHGEF1-201ENST00000337665 GPATCH4Q5T3I0 446 aaKnown RBP16.11■□□□□ 0.17
ARHGEF1-201ENST00000337665 CC2D1AQ6P1N0 951 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms