RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ZNF579Q8NAF0 562 aaKnown RBP16.7■□□□□ 0.26
CBX3-201ENST00000337620 CLSTN2Q9H4D0 955 aa16.7■□□□□ 0.26
CBX3-201ENST00000337620 GCOM1H8Y6P7 765 aaPredicted RBP16.69■□□□□ 0.26
CBX3-201ENST00000337620 CXCL11O14625 94 aa16.69■□□□□ 0.26
CBX3-201ENST00000337620 NEMFO60524 1076 aa16.69■□□□□ 0.26
CBX3-201ENST00000337620 FOSP01100 380 aaPredicted RBP16.69■□□□□ 0.26
CBX3-201ENST00000337620 POLR2MP0CAP2 368 aa16.69■□□□□ 0.26
CBX3-201ENST00000337620 PPIL2Q13356 520 aa16.69■□□□□ 0.26
CBX3-201ENST00000337620 ARL6IP4Q66PJ3 421 aaKnown RBP16.69■□□□□ 0.26
CBX3-201ENST00000337620 P2RX7Q99572 595 aaKnown RBP16.69■□□□□ 0.26
CBX3-201ENST00000337620 HOMER2Q9NSB8 354 aa16.69■□□□□ 0.26
CBX3-201ENST00000337620 HOXC10Q9NYD6 342 aa16.69■□□□□ 0.26
CBX3-201ENST00000337620 FAM13BQ9NYF5 915 aa16.69■□□□□ 0.26
CBX3-201ENST00000337620 A0A0G2JLL6 359 aaPredicted RBP16.69■□□□□ 0.26
CBX3-201ENST00000337620 PIK3CDO00329 1044 aa16.69■□□□□ 0.26
CBX3-201ENST00000337620 EDIL3O43854 480 aa16.69■□□□□ 0.26
CBX3-201ENST00000337620 ZNF202O95125 648 aa16.69■□□□□ 0.26
CBX3-201ENST00000337620 TDP2O95551 362 aa16.69■□□□□ 0.26
CBX3-201ENST00000337620 SYKP43405 635 aa16.69■□□□□ 0.26
CBX3-201ENST00000337620 IL17AQ16552 155 aa16.69■□□□□ 0.26
CBX3-201ENST00000337620 PRRT2Q7Z6L0 340 aaPredicted RBP16.69■□□□□ 0.26
CBX3-201ENST00000337620 HPSEQ9Y251 543 aa16.69■□□□□ 0.26
CBX3-201ENST00000337620 LAD1O00515 517 aa16.68■□□□□ 0.26
CBX3-201ENST00000337620 CELF2O95319 508 aaKnown RBP16.68■□□□□ 0.26
CBX3-201ENST00000337620 DTHD1Q6ZMT9 781 aa16.68■□□□□ 0.26
CBX3-201ENST00000337620 USP49Q70CQ1 688 aa16.68■□□□□ 0.26
CBX3-201ENST00000337620 GBA2Q9HCG7 927 aaPredicted RBP16.68■□□□□ 0.26
CBX3-201ENST00000337620 KCNH3Q9ULD8 1083 aa16.68■□□□□ 0.26
CBX3-201ENST00000337620 ORC2Q13416 577 aaPredicted RBP16.67■□□□□ 0.26
CBX3-201ENST00000337620 LRSAM1Q6UWE0 723 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 GAS2L3Q86XJ1 694 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 POTEDQ86YR6 584 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 CKAP2LQ8IYA6 745 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 PROCA1Q8NCQ7 364 aaPredicted RBP16.67■□□□□ 0.26
CBX3-201ENST00000337620 EPSTI1Q96J88 318 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 SDF4Q9BRK5 362 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 PANK2Q9BZ23 570 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 KCNH4Q9UQ05 1017 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 PTPRFP10586 1907 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 FAM237AA0A1B0GTK4 181 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 NFIBO00712 420 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 OR52Z1P0C646 297 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 PPP4R3AQ6IN85 833 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 C2orf69Q8N8R5 385 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 TRERF1Q96PN7 1200 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 PNMA2Q9UL42 364 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 ADAMTS5Q9UNA0 930 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 PARP14Q460N5 1801 aa16.67■□□□□ 0.26
CBX3-201ENST00000337620 MYH7BA7E2Y1 1941 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.66■□□□□ 0.26
CBX3-201ENST00000337620 SPDYE16A6NNV3 312 aaPredicted RBP16.66■□□□□ 0.26
CBX3-201ENST00000337620 SLC37A4O43826 429 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 USP11P51784 963 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 ARHGAP4P98171 946 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 CALCRLQ16602 461 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 MUM1L1Q5H9M0 696 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 MCF2L2Q86YR7 1114 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 TEX2Q8IWB9 1127 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 REPS2Q8NFH8 660 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 CLEC4DQ8WXI8 215 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 SYMPKQ92797 1274 aaKnown RBP16.66■□□□□ 0.26
CBX3-201ENST00000337620 DDX25Q9UHL0 483 aaKnown RBP16.66■□□□□ 0.26
CBX3-201ENST00000337620 GOLGA6L3A6NEY3 463 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 UNCXA6NJT0 531 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 GJA5P36382 358 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 PRPHP41219 470 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 FKBP1BP68106 108 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 PLS1Q14651 629 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 TMEM132BQ14DG7 1078 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 SNRNP48Q6IEG0 339 aaKnown RBP16.66■□□□□ 0.26
CBX3-201ENST00000337620 PDILTQ8N807 584 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 NAP1L4Q99733 375 aaKnown RBP16.66■□□□□ 0.26
CBX3-201ENST00000337620 RLFQ13129 1914 aa16.66■□□□□ 0.26
CBX3-201ENST00000337620 MYPNQ86TC9 1320 aa16.65■□□□□ 0.26
CBX3-201ENST00000337620 POLR2DO15514 142 aaKnown RBP16.65■□□□□ 0.26
CBX3-201ENST00000337620 GCFC2P16383 781 aaKnown RBP16.65■□□□□ 0.26
CBX3-201ENST00000337620 LONP1P36776 959 aaKnown RBP16.65■□□□□ 0.26
CBX3-201ENST00000337620 SREBF1P36956 1147 aa16.65■□□□□ 0.26
CBX3-201ENST00000337620 RIPK3Q9Y572 518 aa16.65■□□□□ 0.26
CBX3-201ENST00000337620 CTAGE5O15320 804 aa16.64■□□□□ 0.25
CBX3-201ENST00000337620 MARCH6O60337 910 aa16.64■□□□□ 0.25
CBX3-201ENST00000337620 HOXA7P31268 230 aaPredicted RBP16.64■□□□□ 0.25
CBX3-201ENST00000337620 TXKP42681 527 aa16.64■□□□□ 0.25
CBX3-201ENST00000337620 OAZ1P54368 228 aa16.64■□□□□ 0.25
CBX3-201ENST00000337620 IRX3P78415 501 aaPredicted RBP16.64■□□□□ 0.25
CBX3-201ENST00000337620 CHADLQ6NUI6 762 aa16.64■□□□□ 0.25
CBX3-201ENST00000337620 FASTKD5Q7L8L6 764 aaKnown RBP16.64■□□□□ 0.25
CBX3-201ENST00000337620 ZNF214Q9UL59 606 aaPredicted RBP16.64■□□□□ 0.25
CBX3-201ENST00000337620 CDC25AP30304 524 aa16.64■□□□□ 0.25
CBX3-201ENST00000337620 TECP42680 631 aa16.64■□□□□ 0.25
CBX3-201ENST00000337620 HSD17B4P51659 736 aa16.64■□□□□ 0.25
CBX3-201ENST00000337620 UBXN2AP68543 259 aa16.64■□□□□ 0.25
CBX3-201ENST00000337620 SNAPC2Q13487 334 aa16.64■□□□□ 0.25
CBX3-201ENST00000337620 LONRF3Q496Y0 759 aa16.64■□□□□ 0.25
CBX3-201ENST00000337620 CRYGNQ8WXF5 182 aa16.64■□□□□ 0.25
CBX3-201ENST00000337620 MTMR9Q96QG7 549 aa16.64■□□□□ 0.25
CBX3-201ENST00000337620 EHMT1Q9H9B1 1298 aa16.64■□□□□ 0.25
CBX3-201ENST00000337620 RNF146Q9NTX7 359 aa16.64■□□□□ 0.25
CBX3-201ENST00000337620 AGTPBP1Q9UPW5 1226 aa16.64■□□□□ 0.25
CBX3-201ENST00000337620 COL11A1P12107 1806 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms