RNA–Protein interactions for RNA: ENST00000337554.7

TSPO-202, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPO, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-202ENST00000337554 HTRA4P83105 476 aaPredicted RBP18.77■□□□□ 0.6
TSPO-202ENST00000337554 BFSP2Q13515 415 aa18.77■□□□□ 0.6
TSPO-202ENST00000337554 LRRFIP1Q32MZ4 808 aaKnown RBP18.77■□□□□ 0.6
TSPO-202ENST00000337554 FAM83BQ5T0W9 1011 aa18.77■□□□□ 0.6
TSPO-202ENST00000337554 WDR63Q8IWG1 891 aa18.77■□□□□ 0.6
TSPO-202ENST00000337554 FAM133AQ8N9E0 248 aa18.77■□□□□ 0.6
TSPO-202ENST00000337554 INSL6Q9Y581 213 aa18.77■□□□□ 0.6
TSPO-202ENST00000337554 MAP1BP46821 2468 aaKnown RBP18.77■□□□□ 0.59
TSPO-202ENST00000337554 SCN10AQ9Y5Y9 1956 aa18.77■□□□□ 0.59
TSPO-202ENST00000337554 ABHD14A-ACY1A0A1B0GW23 586 aa18.76■□□□□ 0.59
TSPO-202ENST00000337554 LINC01565O15544 149 aa18.76■□□□□ 0.59
TSPO-202ENST00000337554 EYA4O95677 639 aa18.76■□□□□ 0.59
TSPO-202ENST00000337554 MKRN4PQ13434 485 aaPredicted RBP18.76■□□□□ 0.59
TSPO-202ENST00000337554 ANKRD35Q8N283 1001 aa18.76■□□□□ 0.59
TSPO-202ENST00000337554 TMEM105Q8N8V8 129 aa18.76■□□□□ 0.59
TSPO-202ENST00000337554 MSLNLQ96KJ4 702 aa18.76■□□□□ 0.59
TSPO-202ENST00000337554 RIPOR3Q96MK2 946 aa18.76■□□□□ 0.59
TSPO-202ENST00000337554 CRBNQ96SW2 442 aa18.76■□□□□ 0.59
TSPO-202ENST00000337554 CD207Q9UJ71 328 aa18.76■□□□□ 0.59
TSPO-202ENST00000337554 TRIP12Q14669 1992 aaPredicted RBP18.75■□□□□ 0.59
TSPO-202ENST00000337554 USP24Q9UPU5 2620 aa18.75■□□□□ 0.59
TSPO-202ENST00000337554 PUM1Q14671 1186 aaKnown RBP eCLIP18.75■□□□□ 0.59
TSPO-202ENST00000337554 FAM47CQ5HY64 1035 aa18.75■□□□□ 0.59
TSPO-202ENST00000337554 IQSEC1Q6DN90 963 aa18.75■□□□□ 0.59
TSPO-202ENST00000337554 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.75■□□□□ 0.59
TSPO-202ENST00000337554 SH2D4AQ9H788 454 aa18.75■□□□□ 0.59
TSPO-202ENST00000337554 PTPRCP08575 1304 aa18.74■□□□□ 0.59
TSPO-202ENST00000337554 FRYLO94915 3013 aa18.74■□□□□ 0.59
TSPO-202ENST00000337554 UBTFL1P0CB47 393 aaPredicted RBP18.74■□□□□ 0.59
TSPO-202ENST00000337554 SLC4A3P48751 1232 aa18.74■□□□□ 0.59
TSPO-202ENST00000337554 ST3GAL2Q16842 350 aa18.74■□□□□ 0.59
TSPO-202ENST00000337554 NFRKBQ6P4R8 1299 aa18.74■□□□□ 0.59
TSPO-202ENST00000337554 CPXCR1Q8N123 301 aa18.74■□□□□ 0.59
TSPO-202ENST00000337554 SAMD11Q96NU1 681 aa18.74■□□□□ 0.59
TSPO-202ENST00000337554 DLL3Q9NYJ7 618 aa18.74■□□□□ 0.59
TSPO-202ENST00000337554 IGSF3O75054 1194 aa18.73■□□□□ 0.59
TSPO-202ENST00000337554 POLR3DP05423 398 aaPredicted RBP18.73■□□□□ 0.59
TSPO-202ENST00000337554 EEF2P13639 858 aaKnown RBP18.73■□□□□ 0.59
TSPO-202ENST00000337554 ZAP70P43403 619 aa18.73■□□□□ 0.59
TSPO-202ENST00000337554 MCTP2Q6DN12 878 aa18.73■□□□□ 0.59
TSPO-202ENST00000337554 FBXO16Q8IX29 292 aaPredicted RBP18.73■□□□□ 0.59
TSPO-202ENST00000337554 AFAP1L1Q8TED9 768 aa18.73■□□□□ 0.59
TSPO-202ENST00000337554 DHX38Q92620 1227 aaKnown RBP18.73■□□□□ 0.59
TSPO-202ENST00000337554 NUP88Q99567 741 aaPredicted RBP18.73■□□□□ 0.59
TSPO-202ENST00000337554 SLF1Q9BQI6 1058 aa18.73■□□□□ 0.59
TSPO-202ENST00000337554 POLR3EQ9NVU0 708 aa18.73■□□□□ 0.59
TSPO-202ENST00000337554 CEP250Q9BV73 2442 aa18.72■□□□□ 0.59
TSPO-202ENST00000337554 CYP2D6P10635 497 aa18.72■□□□□ 0.59
TSPO-202ENST00000337554 ICAM3P32942 547 aa18.72■□□□□ 0.59
TSPO-202ENST00000337554 EEPD1Q7L9B9 569 aa18.72■□□□□ 0.59
TSPO-202ENST00000337554 FBXO11Q86XK2 927 aa18.72■□□□□ 0.59
TSPO-202ENST00000337554 TMEM192Q8IY95 271 aa18.72■□□□□ 0.59
TSPO-202ENST00000337554 DYNLL2Q96FJ2 89 aa18.72■□□□□ 0.59
TSPO-202ENST00000337554 RIOK1Q9BRS2 568 aaKnown RBP18.72■□□□□ 0.59
TSPO-202ENST00000337554 MTG1Q9BT17 334 aaPredicted RBP18.72■□□□□ 0.59
TSPO-202ENST00000337554 RAVER2Q9HCJ3 691 aaKnown RBP18.72■□□□□ 0.59
TSPO-202ENST00000337554 NAV1Q8NEY1 1877 aa18.71■□□□□ 0.59
TSPO-202ENST00000337554 MYL3P08590 195 aa18.71■□□□□ 0.59
TSPO-202ENST00000337554 SELPP16109 830 aa18.71■□□□□ 0.59
TSPO-202ENST00000337554 ADAM15Q13444 863 aa18.71■□□□□ 0.59
TSPO-202ENST00000337554 LRRC8DQ7L1W4 858 aa18.71■□□□□ 0.59
TSPO-202ENST00000337554 CERS3Q8IU89 383 aa18.71■□□□□ 0.59
TSPO-202ENST00000337554 CLEC1BQ9P126 229 aa18.71■□□□□ 0.59
TSPO-202ENST00000337554 RRP1P56182 461 aaKnown RBP18.7■□□□□ 0.58
TSPO-202ENST00000337554 PTPN11Q06124 597 aaPredicted RBP18.7■□□□□ 0.58
TSPO-202ENST00000337554 PTPN21Q16825 1174 aa18.7■□□□□ 0.58
TSPO-202ENST00000337554 DUSP28Q4G0W2 176 aa18.7■□□□□ 0.58
TSPO-202ENST00000337554 KIAA2013Q8IYS2 634 aa18.7■□□□□ 0.58
TSPO-202ENST00000337554 SMRP1Q8NCR6 262 aa18.7■□□□□ 0.58
TSPO-202ENST00000337554 CHST13Q8NET6 341 aa18.7■□□□□ 0.58
TSPO-202ENST00000337554 CAGE1Q8TC20 777 aa18.7■□□□□ 0.58
TSPO-202ENST00000337554 ASB14A6NK59 587 aa18.69■□□□□ 0.58
TSPO-202ENST00000337554 EFCAB14O75071 495 aa18.69■□□□□ 0.58
TSPO-202ENST00000337554 RBL2Q08999 1139 aa18.69■□□□□ 0.58
TSPO-202ENST00000337554 IKBKEQ14164 716 aa18.69■□□□□ 0.58
TSPO-202ENST00000337554 TRAF7Q6Q0C0 670 aa18.69■□□□□ 0.58
TSPO-202ENST00000337554 PRKRIP1Q9H875 184 aaPredicted RBP18.69■□□□□ 0.58
TSPO-202ENST00000337554 A1CFQ9NQ94 594 aaKnown RBP18.69■□□□□ 0.58
TSPO-202ENST00000337554 FBXO40Q9UH90 709 aa18.69■□□□□ 0.58
TSPO-202ENST00000337554 GRM6O15303 877 aa18.68■□□□□ 0.58
TSPO-202ENST00000337554 LGR5O75473 907 aa18.68■□□□□ 0.58
TSPO-202ENST00000337554 MBTPS1Q14703 1052 aa18.68■□□□□ 0.58
TSPO-202ENST00000337554 PTGISQ16647 500 aa18.68■□□□□ 0.58
TSPO-202ENST00000337554 PRPF38AQ8NAV1 312 aaKnown RBP18.68■□□□□ 0.58
TSPO-202ENST00000337554 IGFLR1Q9H665 355 aa18.68■□□□□ 0.58
TSPO-202ENST00000337554 SLC38A10Q9HBR0 1119 aa18.68■□□□□ 0.58
TSPO-202ENST00000337554 MCM9Q9NXL9 1143 aa18.68■□□□□ 0.58
TSPO-202ENST00000337554 PCDHGC5Q9Y5F6 944 aa18.68■□□□□ 0.58
TSPO-202ENST00000337554 MICAL3Q7RTP6 2002 aa18.67■□□□□ 0.58
TSPO-202ENST00000337554 LINC00271P0C7V0 271 aa18.67■□□□□ 0.58
TSPO-202ENST00000337554 TTC39AQ5SRH9 613 aa18.67■□□□□ 0.58
TSPO-202ENST00000337554 KIAA1211Q6ZU35 1233 aa18.67■□□□□ 0.58
TSPO-202ENST00000337554 DBNDD2Q9BQY9 259 aa18.67■□□□□ 0.58
TSPO-202ENST00000337554 GOPCQ9HD26 462 aa18.67■□□□□ 0.58
TSPO-202ENST00000337554 INCENPQ9NQS7 918 aa18.67■□□□□ 0.58
TSPO-202ENST00000337554 SWAP70Q9UH65 585 aa18.67■□□□□ 0.58
TSPO-202ENST00000337554 SALL2Q9Y467 1007 aaPredicted RBP18.67■□□□□ 0.58
TSPO-202ENST00000337554 NLRC5Q86WI3 1866 aa18.67■□□□□ 0.58
TSPO-202ENST00000337554 SPTBN2O15020 2390 aa18.66■□□□□ 0.58
TSPO-202ENST00000337554 IDH1O75874 414 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms