RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 DISC1Q9NRI5 854 aa15.52■□□□□ 0.07
SF1-202ENST00000334944 SAMM50Q9Y512 469 aa15.52■□□□□ 0.07
SF1-202ENST00000334944 SBF2Q86WG5 1849 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 FAM196BA6NMK8 535 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 AKR1B15C9JRZ8 316 aaPredicted RBP15.51■□□□□ 0.07
SF1-202ENST00000334944 RPS6KA5O75582 802 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 CACNB3P54284 484 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 CDKAL1Q5VV42 579 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 SRGAP1Q7Z6B7 1085 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 DAGLAQ9Y4D2 1042 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 LAMB1P07942 1786 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 M0R2N6 131 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 GTPBP6O43824 516 aaPredicted RBP15.51■□□□□ 0.07
SF1-202ENST00000334944 ZMYND10O75800 440 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 ABL1P00519 1130 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 ERCC3P19447 782 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 TECP42680 631 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 PAK1Q13153 545 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 CRY2Q49AN0 593 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 CEP89Q96ST8 783 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 DDX4Q9NQI0 724 aaKnown RBP15.51■□□□□ 0.07
SF1-202ENST00000334944 KCNQ5Q9NR82 932 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 PCDHAC2Q9Y5I4 1007 aa15.51■□□□□ 0.07
SF1-202ENST00000334944 SNED1Q8TER0 1413 aa15.5■□□□□ 0.07
SF1-202ENST00000334944 ATP2B4P23634 1241 aa15.5■□□□□ 0.07
SF1-202ENST00000334944 TXNRD1Q16881 649 aa15.5■□□□□ 0.07
SF1-202ENST00000334944 SHROOM1Q2M3G4 852 aaPredicted RBP15.5■□□□□ 0.07
SF1-202ENST00000334944 C16orf86Q6ZW13 317 aa15.5■□□□□ 0.07
SF1-202ENST00000334944 GPIHBP1Q8IV16 184 aa15.5■□□□□ 0.07
SF1-202ENST00000334944 NOA1Q8NC60 698 aaKnown RBP15.5■□□□□ 0.07
SF1-202ENST00000334944 DLEC1Q9Y238 1755 aa15.5■□□□□ 0.07
SF1-202ENST00000334944 RGL2O15211 777 aa15.5■□□□□ 0.07
SF1-202ENST00000334944 AKR1B1P15121 316 aa15.5■□□□□ 0.07
SF1-202ENST00000334944 KIF4BQ2VIQ3 1234 aa15.5■□□□□ 0.07
SF1-202ENST00000334944 DPP8Q6V1X1 898 aaPredicted RBP15.5■□□□□ 0.07
SF1-202ENST00000334944 CERS5Q8N5B7 392 aa15.5■□□□□ 0.07
SF1-202ENST00000334944 SLC24A3Q9HC58 644 aa15.5■□□□□ 0.07
SF1-202ENST00000334944 STX10O60499 249 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 GYPCP04921 128 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 SLC16A2P36021 539 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 LONP1P36776 959 aaKnown RBP15.49■□□□□ 0.07
SF1-202ENST00000334944 GNAQP50148 359 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 AFAP1L1Q8TED9 768 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 FAM169AQ9Y6X4 670 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 MYO1FO00160 1098 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 ERLIN1O75477 346 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 IL1R1P14778 569 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 ZNF569Q5MCW4 686 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 MSL1Q68DK7 614 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 GSPT2Q8IYD1 628 aaKnown RBP15.49■□□□□ 0.07
SF1-202ENST00000334944 ANKS1AQ92625 1134 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 CD248Q9HCU0 757 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 SEC63Q9UGP8 760 aaKnown RBP15.49■□□□□ 0.07
SF1-202ENST00000334944 KCNJ18B7U540 433 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 MYO1BO43795 1136 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 CPP00450 1065 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 PLCG1P19174 1290 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 HSPA1LP34931 641 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 TXKP42681 527 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 PPARDQ03181 441 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 KCNJ12Q14500 433 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 ACRBPQ8NEB7 543 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 CCDC148Q8NFR7 591 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 NEDD1Q8NHV4 660 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 FAM71BQ8TC56 605 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 TBCKQ8TEA7 893 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 RRP36Q96EU6 259 aaKnown RBP15.49■□□□□ 0.07
SF1-202ENST00000334944 TTF2Q9UNY4 1162 aaKnown RBP15.49■□□□□ 0.07
SF1-202ENST00000334944 TAF1LQ8IZX4 1826 aa15.49■□□□□ 0.07
SF1-202ENST00000334944 MPHOSPH10O00566 681 aaKnown RBP15.48■□□□□ 0.07
SF1-202ENST00000334944 FILIP1LQ4L180 1135 aa15.48■□□□□ 0.07
SF1-202ENST00000334944 CCDC178Q5BJE1 867 aa15.48■□□□□ 0.07
SF1-202ENST00000334944 TTBK2Q6IQ55 1244 aa15.48■□□□□ 0.07
SF1-202ENST00000334944 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
SF1-202ENST00000334944 NUP88Q99567 741 aaPredicted RBP15.48■□□□□ 0.07
SF1-202ENST00000334944 ROBO3Q96MS0 1386 aa15.48■□□□□ 0.07
SF1-202ENST00000334944 POLRMTO00411 1230 aaKnown RBP15.48■□□□□ 0.07
SF1-202ENST00000334944 NKRFO15226 690 aaKnown RBP eCLIP15.48■□□□□ 0.078e-7■■■□□ 14.6
SF1-202ENST00000334944 PDE6BP35913 854 aa15.48■□□□□ 0.07
SF1-202ENST00000334944 TCP10Q12799 353 aa15.48■□□□□ 0.07
SF1-202ENST00000334944 ZNF658Q5TYW1 1059 aaPredicted RBP15.48■□□□□ 0.07
SF1-202ENST00000334944 ARL6IP4Q66PJ3 421 aaKnown RBP15.48■□□□□ 0.07
SF1-202ENST00000334944 RPAINQ86UA6 219 aa15.48■□□□□ 0.07
SF1-202ENST00000334944 SH3GLB2Q9NR46 395 aa15.48■□□□□ 0.07
SF1-202ENST00000334944 FRMD3A2A2Y4 597 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 SOGA3Q5TF21 947 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 TFR2Q9UP52 801 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 CCDC189A1A4V9 331 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 PPEF1O14829 653 aaPredicted RBP15.47■□□□□ 0.07
SF1-202ENST00000334944 COPB1P53618 953 aaKnown RBP15.47■□□□□ 0.07
SF1-202ENST00000334944 UBXN1Q04323 297 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 UBE2SQ16763 222 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 KIRREL3Q8IZU9 778 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 PROM2Q8N271 834 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 CERKQ8TCT0 537 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 QTRT2Q9H974 415 aaKnown RBP15.47■□□□□ 0.07
SF1-202ENST00000334944 TCP11L1Q9NUJ3 509 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 CAPN7Q9Y6W3 813 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 ZNF831Q5JPB2 1677 aa15.47■□□□□ 0.07
SF1-202ENST00000334944 NHSQ6T4R5 1651 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms