RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 MT-ND3P03897 115 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 IRX1P78414 480 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-201ENST00000334504 ITKQ08881 620 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 EIF4A2Q14240 407 aaKnown RBP10.66□□□□□ -0.7
COL4A6-201ENST00000334504 NUGGCQ68CJ6 796 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 NOSTRINQ8IVI9 506 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 KIAA2013Q8IYS2 634 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 TESK2Q96S53 571 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 ARMCX3Q9UH62 379 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-201ENST00000334504 TECP42680 631 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 DEUP1Q05D60 604 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 SLC12A1Q13621 1099 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 RFX6Q8HWS3 928 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 MAP7D3Q8IWC1 876 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 TPH2Q8IWU9 490 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 XAGE2Q96GT9 111 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 ECEL1O95672 775 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 CCDC159P0C7I6 412 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 YWHAEP62258 255 aaKnown RBP10.66□□□□□ -0.7
COL4A6-201ENST00000334504 SKOR1P84550 965 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 NBPF9Q3BBW0 867 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 ZBTB41Q5SVQ8 909 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 FGFR1OP2Q9NVK5 253 aa10.66□□□□□ -0.7
COL4A6-201ENST00000334504 PLS3P13797 630 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 RINT1Q6NUQ1 792 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 CMTR1Q8N1G2 835 aaKnown RBP10.65□□□□□ -0.7
COL4A6-201ENST00000334504 ZNF710Q8N1W2 664 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 SYT2Q8N9I0 419 aaPredicted RBP10.65□□□□□ -0.7
COL4A6-201ENST00000334504 TM6SF1Q9BZW5 370 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 ZMYND12Q9H0C1 365 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 NT5C3AQ9H0P0 336 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 DENND2AQ9ULE3 1009 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 GINS2Q9Y248 185 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 KDM3AQ9Y4C1 1321 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 RASSF10A6NK89 507 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 PMS1P54277 932 aaKnown RBP10.65□□□□□ -0.7
COL4A6-201ENST00000334504 RGS9BPQ6ZS82 235 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 CADPS2Q86UW7 1296 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 WARS2Q9UGM6 360 aaKnown RBP10.65□□□□□ -0.7
COL4A6-201ENST00000334504 DCTN3O75935 186 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 ATG16L1Q676U5 607 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 TRPC6Q9Y210 931 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 MMEP08473 750 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 USH1GQ495M9 461 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 SGO2Q562F6 1265 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 MUM1L1Q5H9M0 696 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 GLT8D2Q9H1C3 349 aa10.65□□□□□ -0.7
COL4A6-201ENST00000334504 GYG2O15488 501 aa10.65□□□□□ -0.71
COL4A6-201ENST00000334504 RAP1GDS1P52306 607 aa10.65□□□□□ -0.71
COL4A6-201ENST00000334504 PLCB4Q15147 1175 aa10.65□□□□□ -0.71
COL4A6-201ENST00000334504 BEND6Q5SZJ8 279 aaPredicted RBP10.65□□□□□ -0.71
COL4A6-201ENST00000334504 RAB44Q7Z6P3 723 aaPredicted RBP10.65□□□□□ -0.71
COL4A6-201ENST00000334504 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.65□□□□□ -0.71
COL4A6-201ENST00000334504 NEK9Q8TD19 979 aa10.65□□□□□ -0.71
COL4A6-201ENST00000334504 NFU1Q9UMS0 254 aa10.65□□□□□ -0.71
COL4A6-201ENST00000334504 ZBTB22O15209 634 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 MYO1EQ12965 1108 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 PALD1Q9ULE6 856 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 LZTS1Q9Y250 596 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 KDRP35968 1356 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 A0A087WWV3 80 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 SLFN14P0C7P3 912 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 DPCR1Q3MIW9 517 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 C6orf118Q5T5N4 469 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 SYMPKQ92797 1274 aaKnown RBP10.64□□□□□ -0.71
COL4A6-201ENST00000334504 TUBGCP2Q9BSJ2 902 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 KIFC3Q9BVG8 833 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 PPP1R12AO14974 1030 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-201ENST00000334504 ARHGAP18Q8N392 663 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 ENOX1Q8TC92 643 aaKnown RBP10.64□□□□□ -0.71
COL4A6-201ENST00000334504 ECT2Q9H8V3 914 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 SPDYE16A6NNV3 312 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-201ENST00000334504 S100BP04271 92 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-201ENST00000334504 GSPT1P15170 499 aaKnown RBP10.64□□□□□ -0.71
COL4A6-201ENST00000334504 LMNB1P20700 586 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 GGCXP38435 758 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 ADAM9Q13443 819 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 PPP2R5BQ15173 497 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 TRIP13Q15645 432 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-201ENST00000334504 SPDYE2Q495Y8 402 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 NOP9Q86U38 636 aaKnown RBP10.64□□□□□ -0.71
COL4A6-201ENST00000334504 KBTBD3Q8NAB2 608 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 IBTKQ9P2D0 1353 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-201ENST00000334504 N4BP1O75113 896 aaKnown RBP10.64□□□□□ -0.71
COL4A6-201ENST00000334504 CPP00450 1065 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 EIF3BP55884 814 aaKnown RBP10.64□□□□□ -0.71
COL4A6-201ENST00000334504 DZIP3Q86Y13 1208 aaKnown RBP10.64□□□□□ -0.71
COL4A6-201ENST00000334504 ZNF274Q96GC6 653 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-201ENST00000334504 OLFM3Q96PB7 478 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 NACA2Q9H009 215 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 CXorf56Q9H5V9 222 aa10.64□□□□□ -0.71
COL4A6-201ENST00000334504 ZMYM4Q5VZL5 1548 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 PFKFB2O60825 505 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 MRPS25P82663 173 aaKnown RBP10.63□□□□□ -0.71
COL4A6-201ENST00000334504 DAB2P98082 770 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 PTH1RQ03431 593 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 CFAP36Q96G28 342 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 PBKQ96KB5 322 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 AP1M1Q9BXS5 423 aa10.63□□□□□ -0.71
COL4A6-201ENST00000334504 PITPNM3Q9BZ71 974 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms