RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 DR1Q01658 176 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 CALCRLQ16602 461 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 CEP55Q53EZ4 464 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 STX19Q8N4C7 294 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 EDEM3Q9BZQ6 932 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 ATP6V0A4Q9HBG4 840 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 KRT37O76014 449 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 ESRRAP11474 423 aaPredicted RBP5.99□□□□□ -1.45
PTPRB-202ENST00000334414 KLC3Q6P597 504 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 FRMD3A2A2Y4 597 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 GOLGA8JA6NMD2 632 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 DDAH1O94760 285 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 BASP1P80723 227 aaKnown RBP5.99□□□□□ -1.45
PTPRB-202ENST00000334414 ARHGAP44Q17R89 818 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 ZNF280CQ8ND82 737 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 BRIP1Q9BX63 1249 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 MIF4GDA9UHW6 222 aaKnown RBP5.99□□□□□ -1.45
PTPRB-202ENST00000334414 GRIN1Q05586 938 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 KRT81Q14533 505 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 EXOC8Q8IYI6 725 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 HOOK2Q96ED9 719 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 AFG3L2Q9Y4W6 797 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 KDM5CP41229 1560 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 C16orf96A6NNT2 1141 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 IGSF3O75054 1194 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 CYP7A1P22680 504 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 CASP14P31944 242 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 KLHL38Q2WGJ6 581 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 PARVBQ9HBI1 364 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 F6X3S4 739 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 HEXIM1O94992 359 aaKnown RBP5.99□□□□□ -1.45
PTPRB-202ENST00000334414 HAND2P61296 217 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 VSTM4Q8IW00 320 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 RTEL1Q9NZ71 1219 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 LRWD1Q9UFC0 647 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 GSTA1P08263 222 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 PPARGP37231 505 aaPredicted RBP5.99□□□□□ -1.45
PTPRB-202ENST00000334414 RRAGAQ7L523 313 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 ZMYND12Q9H0C1 365 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 CCDC22O60826 627 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 PYGMP11217 842 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 IFNA8P32881 189 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 LRIG3Q6UXM1 1119 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 C1orf112Q9NSG2 853 aa5.99□□□□□ -1.45
PTPRB-202ENST00000334414 ARPP21Q9UBL0 812 aaPredicted RBP5.99□□□□□ -1.45
PTPRB-202ENST00000334414 ZNF518AQ6AHZ1 1483 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 NPATQ14207 1427 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 IQCA1LA6NCM1 817 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 WASLO00401 505 aaPredicted RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 GGPS1O95749 300 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 EIF2S1P05198 315 aaKnown RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 DDX5P17844 614 aaKnown RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 RFX1P22670 979 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 PNOCQ13519 176 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 CASC4Q6P4E1 433 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 TAC1P20366 129 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 EEF1B2P24534 225 aaKnown RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 S100A5P33763 92 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 KPNB1Q14974 876 aaKnown RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 MYOCDQ8IZQ8 938 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 MRPL44Q9H9J2 332 aaKnown RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 ZFP69BQ9UJL9 534 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 CROCC2H7BZ55 1655 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 GOLGA8IPA6NC78 632 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 RSPH10B2B2RC85 870 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 STRNO43815 780 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 GPC4O75487 556 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 RSPH10BP0C881 870 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 PFKFB1P16118 471 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 MYSM1Q5VVJ2 828 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 CFAP36Q96G28 342 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 SH3GL2Q99962 352 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 EDC4Q6P2E9 1401 aaKnown RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 KPNA7A9QM74 516 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 SPARCL1Q14515 664 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 SYCP2LQ5T4T6 812 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 BEND3Q5T5X7 828 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 TNIP2Q8NFZ5 429 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 KIF1BO60333 1816 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 EXOC1LA0A1B0GW35 172 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 DAB1O75553 588 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 SLFN14P0C7P3 912 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 TMED10P49755 219 aaKnown RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 AKAP4Q5JQC9 854 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 RPS6KC1Q96S38 1066 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 LSM14BQ9BX40 385 aaKnown RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 TRIM45Q9H8W5 580 aaPredicted RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 GAP43P17677 238 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 TXNDC2Q86VQ3 553 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 RHOT2Q8IXI1 618 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 SYT2Q8N9I0 419 aaPredicted RBP5.98□□□□□ -1.45
PTPRB-202ENST00000334414 ARHGEF35A5YM69 484 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 GYG2O15488 501 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 EXOC3O60645 756 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 OPTNQ96CV9 577 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 MEIS3Q99687 375 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 KRT38O76015 456 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 TMCC1O94876 653 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 GABPAQ06546 454 aa5.98□□□□□ -1.45
PTPRB-202ENST00000334414 BIRC2Q13490 618 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms