RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 KRT27Q7Z3Y8 459 aa21.22■□□□□ 0.99
RFTN1-201ENST00000334133 MAGEC2Q9UBF1 373 aaPredicted RBP21.22■□□□□ 0.99
RFTN1-201ENST00000334133 ZBTB22O15209 634 aa21.21■□□□□ 0.99
RFTN1-201ENST00000334133 KIF5CO60282 957 aa21.21■□□□□ 0.99
RFTN1-201ENST00000334133 SNAP25P60880 206 aa21.21■□□□□ 0.99
RFTN1-201ENST00000334133 COL23A1Q86Y22 540 aaPredicted RBP21.21■□□□□ 0.99
RFTN1-201ENST00000334133 SLC35F6Q8N357 371 aa21.21■□□□□ 0.99
RFTN1-201ENST00000334133 PCMTD1Q96MG8 357 aaPredicted RBP21.21■□□□□ 0.99
RFTN1-201ENST00000334133 NAA15Q9BXJ9 866 aaKnown RBP21.21■□□□□ 0.99
RFTN1-201ENST00000334133 ITIH6Q6UXX5 1313 aa21.21■□□□□ 0.99
RFTN1-201ENST00000334133 ADAMTSL1Q8N6G6 1762 aa21.21■□□□□ 0.99
RFTN1-201ENST00000334133 IDEP14735 1019 aa21.21■□□□□ 0.99
RFTN1-201ENST00000334133 GRB10Q13322 594 aa21.21■□□□□ 0.99
RFTN1-201ENST00000334133 TTLL1O95922 423 aa21.21■□□□□ 0.99
RFTN1-201ENST00000334133 SLC27A3Q5K4L6 730 aa21.21■□□□□ 0.99
RFTN1-201ENST00000334133 CALML4Q96GE6 196 aa21.21■□□□□ 0.99
RFTN1-201ENST00000334133 TUBGCP2Q9BSJ2 902 aa21.21■□□□□ 0.99
RFTN1-201ENST00000334133 AGPAT5Q9NUQ2 364 aa21.21■□□□□ 0.99
RFTN1-201ENST00000334133 KIF4BQ2VIQ3 1234 aa21.2■□□□□ 0.98
RFTN1-201ENST00000334133 KCNK18Q7Z418 384 aa21.2■□□□□ 0.98
RFTN1-201ENST00000334133 KIAA0895Q8NCT3 520 aa21.2■□□□□ 0.98
RFTN1-201ENST00000334133 GLIS3Q8NEA6 775 aa21.2■□□□□ 0.98
RFTN1-201ENST00000334133 LGALS16A8MUM7 142 aa21.2■□□□□ 0.98
RFTN1-201ENST00000334133 EFCAB8A8MWE9 144 aa21.2■□□□□ 0.98
RFTN1-201ENST00000334133 ZNF543Q08ER8 600 aa21.2■□□□□ 0.98
RFTN1-201ENST00000334133 ZSCAN29Q8IWY8 852 aaPredicted RBP21.2■□□□□ 0.98
RFTN1-201ENST00000334133 CDK5RAP3Q96JB5 506 aa21.2■□□□□ 0.98
RFTN1-201ENST00000334133 AK8Q96MA6 479 aa21.2■□□□□ 0.98
RFTN1-201ENST00000334133 MYMKA6NI61 221 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 TAL1P17542 331 aaPredicted RBP21.19■□□□□ 0.98
RFTN1-201ENST00000334133 NT5C2P49902 561 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 LRRC41Q15345 812 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 APOBEC3HQ6NTF7 200 aaKnown RBP21.19■□□□□ 0.98
RFTN1-201ENST00000334133 TMTC1Q8IUR5 882 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 P2RX5Q93086 422 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 CNOT6LQ96LI5 555 aaKnown RBP21.19■□□□□ 0.98
RFTN1-201ENST00000334133 PNMA5Q96PV4 448 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 BLOC1S4Q9NUP1 217 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 USP17L15C9J2P7 530 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 USP17L13C9JLJ4 530 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 USP17L11C9JVI0 530 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 USP17L18D6R9N7 530 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 USP17L22D6RA61 530 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 USP17L17D6RBQ6 530 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 USP17L19D6RCP7 530 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 USP17L20D6RJB6 530 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 MMP10P09238 476 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 MTIF2P46199 727 aaKnown RBP21.19■□□□□ 0.98
RFTN1-201ENST00000334133 USP17L24Q0WX57 530 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 USP17L6PQ6QN14 398 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 CYP26C1Q6V0L0 522 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 ZHX1Q9UKY1 873 aaPredicted RBP21.19■□□□□ 0.98
RFTN1-201ENST00000334133 GUCA1BQ9UMX6 200 aa21.19■□□□□ 0.98
RFTN1-201ENST00000334133 MARCH6O60337 910 aa21.18■□□□□ 0.98
RFTN1-201ENST00000334133 ASPRV1Q53RT3 343 aa21.18■□□□□ 0.98
RFTN1-201ENST00000334133 SNX29Q8TEQ0 813 aa21.18■□□□□ 0.98
RFTN1-201ENST00000334133 MTMR9Q96QG7 549 aa21.18■□□□□ 0.98
RFTN1-201ENST00000334133 LUC7L2Q9Y383 392 aaKnown RBP21.18■□□□□ 0.98
RFTN1-201ENST00000334133 UTRNP46939 3433 aa21.18■□□□□ 0.98
RFTN1-201ENST00000334133 KLRG2A4D1S0 409 aaPredicted RBP21.18■□□□□ 0.98
RFTN1-201ENST00000334133 SSBP05455 408 aaKnown RBP eCLIP21.18■□□□□ 0.98
RFTN1-201ENST00000334133 ECM1Q16610 540 aa21.18■□□□□ 0.98
RFTN1-201ENST00000334133 TRIM21P19474 475 aaKnown RBP21.18■□□□□ 0.98
RFTN1-201ENST00000334133 NOVP48745 357 aa21.18■□□□□ 0.98
RFTN1-201ENST00000334133 TBC1D8BQ0IIM8 1120 aa21.18■□□□□ 0.98
RFTN1-201ENST00000334133 ZNF507Q8TCN5 953 aa21.18■□□□□ 0.98
RFTN1-201ENST00000334133 TEKT1Q969V4 418 aa21.18■□□□□ 0.98
RFTN1-201ENST00000334133 SEMA6BQ9H3T3 888 aa21.18■□□□□ 0.98
RFTN1-201ENST00000334133 REXO2Q9Y3B8 237 aaKnown RBP21.18■□□□□ 0.98
RFTN1-201ENST00000334133 SV2BQ7L1I2 683 aa21.17■□□□□ 0.98
RFTN1-201ENST00000334133 KRT222Q8N1A0 295 aa21.17■□□□□ 0.98
RFTN1-201ENST00000334133 CCDC51Q96ER9 411 aa21.17■□□□□ 0.98
RFTN1-201ENST00000334133 THAP9Q9H5L6 903 aa21.17■□□□□ 0.98
RFTN1-201ENST00000334133 DNAJC18Q9H819 358 aa21.17■□□□□ 0.98
RFTN1-201ENST00000334133 IGKV6D-41A0A0C4DH26 115 aa21.17■□□□□ 0.98
RFTN1-201ENST00000334133 CCNE1P24864 410 aa21.17■□□□□ 0.98
RFTN1-201ENST00000334133 ARHGAP25P42331 645 aa21.17■□□□□ 0.98
RFTN1-201ENST00000334133 RAD51AP2Q09MP3 1159 aa21.17■□□□□ 0.98
RFTN1-201ENST00000334133 C7orf25Q9BPX7 421 aa21.17■□□□□ 0.98
RFTN1-201ENST00000334133 EEF1GP26641 437 aaKnown RBP21.16■□□□□ 0.98
RFTN1-201ENST00000334133 CRKP46108 304 aa21.16■□□□□ 0.98
RFTN1-201ENST00000334133 OR8K1Q8NGG5 319 aa21.16■□□□□ 0.98
RFTN1-201ENST00000334133 CCDC47Q96A33 483 aaKnown RBP21.16■□□□□ 0.98
RFTN1-201ENST00000334133 FHOD1Q9Y613 1164 aa21.16■□□□□ 0.98
RFTN1-201ENST00000334133 EPN1Q9Y6I3 576 aaPredicted RBP21.16■□□□□ 0.98
RFTN1-201ENST00000334133 PNMA6FA0A0J9YX94 578 aa21.16■□□□□ 0.98
RFTN1-201ENST00000334133 DDTLA6NHG4 134 aaPredicted RBP21.16■□□□□ 0.98
RFTN1-201ENST00000334133 ENC1O14682 589 aa21.16■□□□□ 0.98
RFTN1-201ENST00000334133 SNHG28P0DPA3 235 aa21.16■□□□□ 0.98
RFTN1-201ENST00000334133 CACNB1Q02641 598 aaPredicted RBP21.16■□□□□ 0.98
RFTN1-201ENST00000334133 WDR59Q6PJI9 974 aa21.16■□□□□ 0.98
RFTN1-201ENST00000334133 TMCO3Q6UWJ1 677 aa21.16■□□□□ 0.98
RFTN1-201ENST00000334133 DHTKD1Q96HY7 919 aaPredicted RBP21.16■□□□□ 0.98
RFTN1-201ENST00000334133 NOC4LQ9BVI4 516 aaKnown RBP21.16■□□□□ 0.98
RFTN1-201ENST00000334133 TBC1D7Q9P0N9 293 aa21.16■□□□□ 0.98
RFTN1-201ENST00000334133 NDUFA10O95299 355 aa21.15■□□□□ 0.98
RFTN1-201ENST00000334133 LARP4BQ92615 738 aaKnown RBP21.15■□□□□ 0.98
RFTN1-201ENST00000334133 ESYT2A0FGR8 921 aa21.15■□□□□ 0.98
RFTN1-201ENST00000334133 RASSF10A6NK89 507 aa21.15■□□□□ 0.98
RFTN1-201ENST00000334133 HLA-DOAP06340 250 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms