RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 RIPK3Q9Y572 518 aa26.48■■□□□ 1.83
TSEN54-201ENST00000333213 SRPRBQ9Y5M8 271 aaKnown RBP26.48■■□□□ 1.83
TSEN54-201ENST00000333213 A0A1B0GVL5 298 aa26.47■■□□□ 1.83
TSEN54-201ENST00000333213 ZBED4O75132 1171 aa26.47■■□□□ 1.83
TSEN54-201ENST00000333213 FDX1P10109 184 aa26.47■■□□□ 1.83
TSEN54-201ENST00000333213 HOXA7P31268 230 aaPredicted RBP26.47■■□□□ 1.83
TSEN54-201ENST00000333213 SNW1Q13573 536 aaKnown RBP26.47■■□□□ 1.83
TSEN54-201ENST00000333213 TMEM132BQ14DG7 1078 aa26.47■■□□□ 1.83
TSEN54-201ENST00000333213 ANO3Q9BYT9 981 aa26.47■■□□□ 1.83
TSEN54-201ENST00000333213 DACT1Q9NYF0 836 aa26.47■■□□□ 1.83
TSEN54-201ENST00000333213 NFIBO00712 420 aa26.47■■□□□ 1.83
TSEN54-201ENST00000333213 CCNT1O60563 726 aaKnown RBP26.47■■□□□ 1.83
TSEN54-201ENST00000333213 CFBP00751 764 aa26.47■■□□□ 1.83
TSEN54-201ENST00000333213 IL17AQ16552 155 aa26.47■■□□□ 1.83
TSEN54-201ENST00000333213 C2orf69Q8N8R5 385 aa26.47■■□□□ 1.83
TSEN54-201ENST00000333213 FSIP1Q8NA03 581 aa26.47■■□□□ 1.83
TSEN54-201ENST00000333213 ENGASEQ8NFI3 743 aa26.47■■□□□ 1.83
TSEN54-201ENST00000333213 CRYGNQ8WXF5 182 aa26.47■■□□□ 1.83
TSEN54-201ENST00000333213 CUTAO60888 179 aa26.46■■□□□ 1.83
TSEN54-201ENST00000333213 BMP15O95972 392 aa26.46■■□□□ 1.83
TSEN54-201ENST00000333213 CMA1P23946 247 aa26.46■■□□□ 1.83
TSEN54-201ENST00000333213 ZNF445P59923 1031 aa26.46■■□□□ 1.83
TSEN54-201ENST00000333213 AP3B2Q13367 1082 aa26.46■■□□□ 1.83
TSEN54-201ENST00000333213 MUM1L1Q5H9M0 696 aa26.46■■□□□ 1.83
TSEN54-201ENST00000333213 SPECC1Q5M775 1068 aa26.46■■□□□ 1.83
TSEN54-201ENST00000333213 HOXC10Q9NYD6 342 aa26.46■■□□□ 1.83
TSEN54-201ENST00000333213 MYH7BA7E2Y1 1941 aa26.46■■□□□ 1.83
TSEN54-201ENST00000333213 MYPNQ86TC9 1320 aa26.46■■□□□ 1.83
TSEN54-201ENST00000333213 ALAS1P13196 640 aa26.45■■□□□ 1.83
TSEN54-201ENST00000333213 NDUFA8P51970 172 aa26.45■■□□□ 1.83
TSEN54-201ENST00000333213 MRPS27Q92552 414 aaKnown RBP26.45■■□□□ 1.83
TSEN54-201ENST00000333213 PEX10O60683 326 aa26.45■■□□□ 1.82
TSEN54-201ENST00000333213 TDP2O95551 362 aa26.45■■□□□ 1.82
TSEN54-201ENST00000333213 ZSCAN23Q3MJ62 389 aa26.45■■□□□ 1.82
TSEN54-201ENST00000333213 GPAT2Q6NUI2 795 aa26.45■■□□□ 1.82
TSEN54-201ENST00000333213 HOMER2Q9NSB8 354 aa26.45■■□□□ 1.82
TSEN54-201ENST00000333213 AGTPBP1Q9UPW5 1226 aa26.45■■□□□ 1.82
TSEN54-201ENST00000333213 CCDC173Q0VFZ6 552 aa26.44■■□□□ 1.82
TSEN54-201ENST00000333213 CSRNP2Q9H175 543 aa26.44■■□□□ 1.82
TSEN54-201ENST00000333213 GCOM1H8Y6P7 765 aaPredicted RBP26.43■■□□□ 1.82
TSEN54-201ENST00000333213 POLR2MP0CAP2 368 aa26.43■■□□□ 1.82
TSEN54-201ENST00000333213 RESP18Q5W5W9 173 aa26.43■■□□□ 1.82
TSEN54-201ENST00000333213 USP49Q70CQ1 688 aa26.43■■□□□ 1.82
TSEN54-201ENST00000333213 MS4A4AQ96JQ5 239 aa26.43■■□□□ 1.82
TSEN54-201ENST00000333213 PPP1R9BQ96SB3 815 aa26.43■■□□□ 1.82
TSEN54-201ENST00000333213 ESPNB1AK53 854 aa26.43■■□□□ 1.82
TSEN54-201ENST00000333213 SLC37A4O43826 429 aa26.43■■□□□ 1.82
TSEN54-201ENST00000333213 OAZ1P54368 228 aa26.43■■□□□ 1.82
TSEN54-201ENST00000333213 MKRN3Q13064 507 aaKnown RBP26.43■■□□□ 1.82
TSEN54-201ENST00000333213 FCHSD1Q86WN1 690 aa26.43■■□□□ 1.82
TSEN54-201ENST00000333213 FMR1NBQ8N0W7 255 aaPredicted RBP26.43■■□□□ 1.82
TSEN54-201ENST00000333213 HPSEQ9Y251 543 aa26.43■■□□□ 1.82
TSEN54-201ENST00000333213 CTDP1Q9Y5B0 961 aaPredicted RBP26.43■■□□□ 1.82
TSEN54-201ENST00000333213 SPDYE3A6NKU9 549 aa26.42■■□□□ 1.82
TSEN54-201ENST00000333213 ATP2A1O14983 1001 aa26.42■■□□□ 1.82
TSEN54-201ENST00000333213 PFKFB1P16118 471 aa26.42■■□□□ 1.82
TSEN54-201ENST00000333213 HSD17B4P51659 736 aa26.42■■□□□ 1.82
TSEN54-201ENST00000333213 SNAPC2Q13487 334 aa26.42■■□□□ 1.82
TSEN54-201ENST00000333213 ZNF579Q8NAF0 562 aaKnown RBP26.42■■□□□ 1.82
TSEN54-201ENST00000333213 ASCC2Q9H1I8 757 aaPredicted RBP26.42■■□□□ 1.82
TSEN54-201ENST00000333213 COL20A1Q9P218 1284 aa26.42■■□□□ 1.82
TSEN54-201ENST00000333213 FAM237AA0A1B0GTK4 181 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 KIF3CO14782 793 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 FOSP01100 380 aaPredicted RBP26.41■■□□□ 1.82
TSEN54-201ENST00000333213 GHRHRQ02643 423 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 FAM160A1Q05DH4 1040 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 SNRNP48Q6IEG0 339 aaKnown RBP26.41■■□□□ 1.82
TSEN54-201ENST00000333213 LBX2Q6XYB7 198 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 POTEDQ86YR6 584 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 FERMT2Q96AC1 680 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 TRIM44Q96DX7 344 aaPredicted RBP26.41■■□□□ 1.82
TSEN54-201ENST00000333213 TRERF1Q96PN7 1200 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 GPBP1L1Q9HC44 474 aaPredicted RBP26.41■■□□□ 1.82
TSEN54-201ENST00000333213 VWA3AA6NCI4 1184 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 NEMFO60524 1076 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 SREBF1P36956 1147 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 ARHGAP4P98171 946 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 CCDC183Q5T5S1 534 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 ARL6IP4Q66PJ3 421 aaKnown RBP26.41■■□□□ 1.82
TSEN54-201ENST00000333213 PPP4R3AQ6IN85 833 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 FASTKD5Q7L8L6 764 aaKnown RBP26.41■■□□□ 1.82
TSEN54-201ENST00000333213 TEX2Q8IWB9 1127 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 BTBD7Q9P203 1132 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 A0A0G2JMZ2 1700 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 TRPM7Q96QT4 1865 aa26.41■■□□□ 1.82
TSEN54-201ENST00000333213 MCTP2Q6DN12 878 aa26.4■■□□□ 1.82
TSEN54-201ENST00000333213 CCDC73Q6ZRK6 1079 aa26.4■■□□□ 1.82
TSEN54-201ENST00000333213 PASKQ96RG2 1323 aa26.4■■□□□ 1.82
TSEN54-201ENST00000333213 USP11P51784 963 aa26.39■■□□□ 1.82
TSEN54-201ENST00000333213 MTMR9Q96QG7 549 aa26.39■■□□□ 1.82
TSEN54-201ENST00000333213 TEX13BQ9BXU2 312 aa26.39■■□□□ 1.82
TSEN54-201ENST00000333213 CAMK4Q16566 473 aa26.39■■□□□ 1.81
TSEN54-201ENST00000333213 EPSTI1Q96J88 318 aa26.39■■□□□ 1.81
TSEN54-201ENST00000333213 RNF146Q9NTX7 359 aa26.39■■□□□ 1.81
TSEN54-201ENST00000333213 PNMA2Q9UL42 364 aa26.39■■□□□ 1.81
TSEN54-201ENST00000333213 SYCE3A1L190 88 aa26.38■■□□□ 1.81
TSEN54-201ENST00000333213 HUNKP57058 714 aa26.38■■□□□ 1.81
TSEN54-201ENST00000333213 HERVK_113P62684 666 aa26.38■■□□□ 1.81
TSEN54-201ENST00000333213 IRX3P78415 501 aaPredicted RBP26.38■■□□□ 1.81
TSEN54-201ENST00000333213 ORC2Q13416 577 aaPredicted RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms