RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 ZNF577Q9BSK1 485 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 TBK1Q9UHD2 729 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 KIAA1024Q9UPX6 916 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 TROVE2P10155 538 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLN8-201ENST00000331222 CXCR5P32302 372 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 NSUN2Q08J23 767 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLN8-201ENST00000331222 RWDD4Q6NW29 188 aaKnown RBP11.54□□□□□ -0.56
CLN8-201ENST00000331222 MYOCDQ8IZQ8 938 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 MRPL11Q9Y3B7 192 aaKnown RBP11.54□□□□□ -0.56
CLN8-201ENST00000331222 SYCP2Q9BX26 1530 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 PPEF1O14829 653 aaPredicted RBP11.54□□□□□ -0.56
CLN8-201ENST00000331222 OAS2P29728 719 aaKnown RBP11.54□□□□□ -0.56
CLN8-201ENST00000331222 METTL23Q86XA0 190 aa11.54□□□□□ -0.56
CLN8-201ENST00000331222 SMYD4Q8IYR2 804 aaPredicted RBP11.54□□□□□ -0.56
CLN8-201ENST00000331222 KCNQ3O43525 872 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 ZMYND10O75800 440 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 HEXIM1O94992 359 aaKnown RBP11.53□□□□□ -0.56
CLN8-201ENST00000331222 SSTR3P32745 418 aaPredicted RBP11.53□□□□□ -0.56
CLN8-201ENST00000331222 ANKRD13CQ8N6S4 541 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 ZNF668Q96K58 619 aaPredicted RBP11.53□□□□□ -0.56
CLN8-201ENST00000331222 GSTA4O15217 222 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 MYL7Q01449 175 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 RASSF7Q02833 373 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 TRIP13Q15645 432 aaPredicted RBP11.53□□□□□ -0.56
CLN8-201ENST00000331222 TSNAXIP1Q2TAA8 658 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 C1orf228Q6PIY5 440 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 POLR3EQ9NVU0 708 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 KDM3AQ9Y4C1 1321 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 ATF2P15336 505 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 OSBPP22059 807 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 RPS8P62241 208 aaKnown RBP11.53□□□□□ -0.56
CLN8-201ENST00000331222 LRCH2Q5VUJ6 765 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 RAB17Q9H0T7 212 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 PAK2Q13177 524 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 LRRC41Q15345 812 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 ZCWPW1Q9H0M4 648 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 ZNF75DP51815 510 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 PABPC4Q13310 644 aaKnown RBP eCLIP11.53□□□□□ -0.56
CLN8-201ENST00000331222 TNFAIP1Q13829 316 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 MTERF2Q49AM1 385 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 BLIDQ8IZY5 108 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 A0A1W2PP64 1363 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 GOLGA8CPA6NN73 597 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 HNRNPDLO14979 420 aaKnown RBP11.53□□□□□ -0.56
CLN8-201ENST00000331222 LMNB1P20700 586 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 NOP14P78316 857 aaKnown RBP11.53□□□□□ -0.56
CLN8-201ENST00000331222 KCTD16Q68DU8 428 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 PNMA1Q8ND90 353 aa11.53□□□□□ -0.56
CLN8-201ENST00000331222 PPWD1Q96BP3 646 aaKnown RBP11.53□□□□□ -0.56
CLN8-201ENST00000331222 IFNAR2P48551 515 aa11.52□□□□□ -0.56
CLN8-201ENST00000331222 LRRC24Q50LG9 513 aa11.52□□□□□ -0.56
CLN8-201ENST00000331222 ARHGAP24Q8N264 748 aa11.52□□□□□ -0.56
CLN8-201ENST00000331222 GIGYF1O75420 1035 aaPredicted RBP11.52□□□□□ -0.56
CLN8-201ENST00000331222 NPR1P16066 1061 aa11.52□□□□□ -0.56
CLN8-201ENST00000331222 IRX4P78413 519 aa11.52□□□□□ -0.56
CLN8-201ENST00000331222 FAM160B1Q5W0V3 765 aa11.52□□□□□ -0.56
CLN8-201ENST00000331222 SDCCAG3Q96C92 435 aa11.52□□□□□ -0.56
CLN8-201ENST00000331222 PPP1R2P41236 205 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 RASSF2P50749 326 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 EPHB1P54762 984 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 RUFY4Q6ZNE9 571 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 HNRNPCL2B2RXH8 293 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 HNRNPCL1O60812 293 aaKnown RBP11.52□□□□□ -0.57
CLN8-201ENST00000331222 RNF8O76064 485 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 APOEP02649 317 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 DCAF15Q66K64 600 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 CFAP61Q8NHU2 1237 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 CCDC94Q9BW85 323 aaPredicted RBP11.52□□□□□ -0.57
CLN8-201ENST00000331222 XPO4Q9C0E2 1151 aaKnown RBP11.52□□□□□ -0.57
CLN8-201ENST00000331222 RPSAP08865 295 aaKnown RBP11.52□□□□□ -0.57
CLN8-201ENST00000331222 CLTAP09496 248 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 ADORA1P30542 326 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 KCTD6Q8NC69 237 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 N4BP2L2Q92802 583 aaPredicted RBP11.52□□□□□ -0.57
CLN8-201ENST00000331222 TSPYL2Q9H2G4 693 aaPredicted RBP11.52□□□□□ -0.57
CLN8-201ENST00000331222 DNAJC17Q9NVM6 304 aaKnown RBP11.52□□□□□ -0.57
CLN8-201ENST00000331222 STK24Q9Y6E0 443 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 ADD1P35611 737 aaKnown RBP11.52□□□□□ -0.57
CLN8-201ENST00000331222 ARHGAP4P98171 946 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 SLC9A5Q14940 896 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 USPL1Q5W0Q7 1092 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 MMTAG2Q9BU76 263 aaKnown RBP11.52□□□□□ -0.57
CLN8-201ENST00000331222 SLC7A5P2Q9GIP4 190 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 FAM49AQ9H0Q0 323 aaPredicted RBP11.52□□□□□ -0.57
CLN8-201ENST00000331222 GLT8D2Q9H1C3 349 aa11.52□□□□□ -0.57
CLN8-201ENST00000331222 VGLL3A8MV65 326 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 FMNL1O95466 1100 aaPredicted RBP11.51□□□□□ -0.57
CLN8-201ENST00000331222 ATP6V1E1P36543 226 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 DYNLL1P63167 89 aaKnown RBP11.51□□□□□ -0.57
CLN8-201ENST00000331222 ADAM9Q13443 819 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 TSC1Q92574 1164 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 GCNAQ96QF7 691 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 KRT82Q9NSB4 513 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.51□□□□□ -0.57
CLN8-201ENST00000331222 A0A087WWV3 80 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 PFDN6O15212 129 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 DDIT3P35638 169 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 PDE1BQ01064 536 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 ME3Q16798 604 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 ODR4Q5SWX8 454 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms