RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 CCNE1P24864 410 aa16.33■□□□□ 0.2
TPM3-206ENST00000330188 KRT9P35527 623 aa16.33■□□□□ 0.2
TPM3-206ENST00000330188 AMPD3Q01432 767 aa16.33■□□□□ 0.2
TPM3-206ENST00000330188 TTBK2Q6IQ55 1244 aa16.33■□□□□ 0.2
TPM3-206ENST00000330188 CYP26C1Q6V0L0 522 aa16.33■□□□□ 0.2
TPM3-206ENST00000330188 ACRBPQ8NEB7 543 aa16.33■□□□□ 0.2
TPM3-206ENST00000330188 P2RX5Q93086 422 aa16.33■□□□□ 0.2
TPM3-206ENST00000330188 RIC8AQ9NPQ8 531 aa16.33■□□□□ 0.2
TPM3-206ENST00000330188 HLA-DOAP06340 250 aa16.32■□□□□ 0.2
TPM3-206ENST00000330188 FCER1AP12319 257 aa16.32■□□□□ 0.2
TPM3-206ENST00000330188 HMGB2P26583 209 aaKnown RBP16.32■□□□□ 0.2
TPM3-206ENST00000330188 CLK2P49760 499 aaKnown RBP16.32■□□□□ 0.2
TPM3-206ENST00000330188 NFIAQ12857 509 aa16.32■□□□□ 0.2
TPM3-206ENST00000330188 COBLL1Q53SF7 1204 aa16.32■□□□□ 0.2
TPM3-206ENST00000330188 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
TPM3-206ENST00000330188 PNMA5Q96PV4 448 aa16.32■□□□□ 0.2
TPM3-206ENST00000330188 BLOC1S4Q9NUP1 217 aa16.32■□□□□ 0.2
TPM3-206ENST00000330188 ZNF446Q9NWS9 450 aa16.32■□□□□ 0.2
TPM3-206ENST00000330188 MAGEC2Q9UBF1 373 aaPredicted RBP16.32■□□□□ 0.2
TPM3-206ENST00000330188 LRWD1Q9UFC0 647 aa16.32■□□□□ 0.2
TPM3-206ENST00000330188 MYH7BA7E2Y1 1941 aa16.32■□□□□ 0.2
TPM3-206ENST00000330188 SLURP2P0DP57 97 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 PPP2R3AQ06190 1150 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 ANKRD40Q6AI12 368 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 CSGALNACT2Q8N6G5 542 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 GTPBP4Q9BZE4 634 aaKnown RBP16.31■□□□□ 0.2
TPM3-206ENST00000330188 TTC26A0AVF1 554 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 BICDL2A1A5D9 508 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 PDE6BP35913 854 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 PPP1R2P41236 205 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 CRKP46108 304 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 UBE2SQ16763 222 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 TMEM266Q2M3C6 531 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 GPATCH4Q5T3I0 446 aaKnown RBP16.31■□□□□ 0.2
TPM3-206ENST00000330188 ZFPM1Q8IX07 1006 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 KIAA0895Q8NCT3 520 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 MTMR8Q96EF0 704 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 MASTLQ96GX5 879 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 EHD4Q9H223 541 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 DNAJC18Q9H819 358 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 PRDM10Q9NQV6 1147 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 STK17AQ9UEE5 414 aa16.31■□□□□ 0.2
TPM3-206ENST00000330188 ZNF646O15015 1829 aaPredicted RBP16.31■□□□□ 0.2
TPM3-206ENST00000330188 G3V3G9 751 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 MPHOSPH10O00566 681 aaKnown RBP16.3■□□□□ 0.2
TPM3-206ENST00000330188 KIF5CO60282 957 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 SLC16A2P36021 539 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 TNNI2P48788 182 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 CLCN6P51797 869 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 PDIA5Q14554 519 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 CCDC96Q2M329 555 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 DCAF8Q5TAQ9 597 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 CNNM4Q6P4Q7 775 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 SV2BQ7L1I2 683 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 FAM53CQ9NYF3 392 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 ARFGEF1Q9Y6D6 1849 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 USP17L10C9JJH3 530 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 PES1O00541 588 aaKnown RBP16.3■□□□□ 0.2
TPM3-206ENST00000330188 DNM2P50570 870 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 ATP2B2Q01814 1243 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 MCM6Q14566 821 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 PPP4R3AQ6IN85 833 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 KCTD1Q719H9 257 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 CUL5Q93034 780 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 CHP1Q99653 195 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 TUBGCP2Q9BSJ2 902 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 DBNDD1Q9H9R9 158 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 KCNQ5Q9NR82 932 aa16.3■□□□□ 0.2
TPM3-206ENST00000330188 POTEMA6NI47 508 aa16.29■□□□□ 0.2
TPM3-206ENST00000330188 MYMKA6NI61 221 aa16.29■□□□□ 0.2
TPM3-206ENST00000330188 B4DLN1 442 aa16.29■□□□□ 0.2
TPM3-206ENST00000330188 ZBTB5O15062 677 aa16.29■□□□□ 0.2
TPM3-206ENST00000330188 MMP10P09238 476 aa16.29■□□□□ 0.2
TPM3-206ENST00000330188 PRKCSHP14314 528 aaPredicted RBP16.29■□□□□ 0.2
TPM3-206ENST00000330188 RSRC2Q7L4I2 434 aaKnown RBP16.29■□□□□ 0.2
TPM3-206ENST00000330188 OR8K1Q8NGG5 319 aa16.29■□□□□ 0.2
TPM3-206ENST00000330188 LARP4BQ92615 738 aaKnown RBP16.29■□□□□ 0.2
TPM3-206ENST00000330188 HPS3Q969F9 1004 aa16.29■□□□□ 0.2
TPM3-206ENST00000330188 CNOT6LQ96LI5 555 aaKnown RBP16.29■□□□□ 0.2
TPM3-206ENST00000330188 CCDC17Q96LX7 622 aa16.29■□□□□ 0.2
TPM3-206ENST00000330188 ZDHHC15Q96MV8 337 aa16.29■□□□□ 0.2
TPM3-206ENST00000330188 DNAJC7Q99615 494 aa16.29■□□□□ 0.2
TPM3-206ENST00000330188 RAB34Q9BZG1 259 aa16.29■□□□□ 0.2
TPM3-206ENST00000330188 CAPN11Q9UMQ6 739 aa16.29■□□□□ 0.2
TPM3-206ENST00000330188 ABL1P00519 1130 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 ARHGAP25P42331 645 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 TMEM119Q4V9L6 283 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 ZNF569Q5MCW4 686 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 UNC13DQ70J99 1090 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 PODNQ7Z5L7 613 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 FAM114A1Q8IWE2 563 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 EEF2KMTQ96G04 330 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 CDK5RAP3Q96JB5 506 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 NUDT12Q9BQG2 462 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 SLF1Q9BQI6 1058 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 TMX4Q9H1E5 349 aaPredicted RBP16.28■□□□□ 0.2
TPM3-206ENST00000330188 SEMA6BQ9H3T3 888 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 LUC7L2Q9Y383 392 aaKnown RBP16.28■□□□□ 0.2
TPM3-206ENST00000330188 PCDHAC2Q9Y5I4 1007 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 SCN9AQ15858 1988 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms