RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 SMPD1P17405 629 aa17.19■□□□□ 0.34
TSPO-201ENST00000329563 FPGSQ05932 587 aa17.19■□□□□ 0.34
TSPO-201ENST00000329563 EEPD1Q7L9B9 569 aa17.19■□□□□ 0.34
TSPO-201ENST00000329563 FBXO16Q8IX29 292 aaPredicted RBP17.19■□□□□ 0.34
TSPO-201ENST00000329563 MAP4K1Q92918 833 aa17.19■□□□□ 0.34
TSPO-201ENST00000329563 CTNNA3Q9UI47 895 aa17.19■□□□□ 0.34
TSPO-201ENST00000329563 UNC80Q8N2C7 3258 aa17.19■□□□□ 0.34
TSPO-201ENST00000329563 TMEM265A0A087WTH1 108 aa17.18■□□□□ 0.34
TSPO-201ENST00000329563 CYP21A2P08686 494 aa17.18■□□□□ 0.34
TSPO-201ENST00000329563 ALDH5A1P51649 535 aaPredicted RBP17.18■□□□□ 0.34
TSPO-201ENST00000329563 NKX3-2P78367 333 aa17.18■□□□□ 0.34
TSPO-201ENST00000329563 BEX3Q00994 111 aa17.18■□□□□ 0.34
TSPO-201ENST00000329563 SEC23AQ15436 765 aa17.18■□□□□ 0.34
TSPO-201ENST00000329563 IQCA1Q86XH1 822 aa17.18■□□□□ 0.34
TSPO-201ENST00000329563 RNPC3Q96LT9 517 aaKnown RBP17.18■□□□□ 0.34
TSPO-201ENST00000329563 USP26Q9BXU7 913 aa17.18■□□□□ 0.34
TSPO-201ENST00000329563 LSG1Q9H089 658 aaKnown RBP17.18■□□□□ 0.34
TSPO-201ENST00000329563 U3KPZ7 1027 aaPredicted RBP17.18■□□□□ 0.34
TSPO-201ENST00000329563 TLR3O15455 904 aaKnown RBP17.17■□□□□ 0.34
TSPO-201ENST00000329563 SEC24BO95487 1268 aa17.17■□□□□ 0.34
TSPO-201ENST00000329563 TNFAIP2Q03169 654 aa17.17■□□□□ 0.34
TSPO-201ENST00000329563 FAAP100Q0VG06 881 aa17.17■□□□□ 0.34
TSPO-201ENST00000329563 C9orf50Q5SZB4 431 aa17.17■□□□□ 0.34
TSPO-201ENST00000329563 GPATCH4Q5T3I0 446 aaKnown RBP17.17■□□□□ 0.34
TSPO-201ENST00000329563 VTI1AQ96AJ9 217 aa17.17■□□□□ 0.34
TSPO-201ENST00000329563 GUCD1Q96NT3 240 aa17.17■□□□□ 0.34
TSPO-201ENST00000329563 KRT23Q9C075 422 aa17.17■□□□□ 0.34
TSPO-201ENST00000329563 KAT14Q9H8E8 782 aa17.17■□□□□ 0.34
TSPO-201ENST00000329563 WDR19Q8NEZ3 1342 aa17.17■□□□□ 0.34
TSPO-201ENST00000329563 A0A0U1RQG5 324 aaPredicted RBP17.16■□□□□ 0.34
TSPO-201ENST00000329563 PTPDC1A2A3K4 754 aa17.16■□□□□ 0.34
TSPO-201ENST00000329563 CALML3P27482 149 aa17.16■□□□□ 0.34
TSPO-201ENST00000329563 NT5C2P49902 561 aa17.16■□□□□ 0.34
TSPO-201ENST00000329563 CDK7P50613 346 aa17.16■□□□□ 0.34
TSPO-201ENST00000329563 EPHB4P54760 987 aa17.16■□□□□ 0.34
TSPO-201ENST00000329563 CDC37Q16543 378 aaPredicted RBP17.16■□□□□ 0.34
TSPO-201ENST00000329563 USH1GQ495M9 461 aa17.16■□□□□ 0.34
TSPO-201ENST00000329563 GNASQ5JWF2 1037 aa17.16■□□□□ 0.34
TSPO-201ENST00000329563 RNF20Q5VTR2 975 aa17.16■□□□□ 0.34
TSPO-201ENST00000329563 STOX1Q6ZVD7 989 aa17.16■□□□□ 0.34
TSPO-201ENST00000329563 TLK2Q86UE8 772 aa17.16■□□□□ 0.34
TSPO-201ENST00000329563 ADGRF4Q8IZF3 695 aa17.16■□□□□ 0.34
TSPO-201ENST00000329563 STAG2Q8N3U4 1231 aa17.16■□□□□ 0.34
TSPO-201ENST00000329563 TBC1D5Q92609 795 aa17.16■□□□□ 0.34
TSPO-201ENST00000329563 FAM161BQ96MY7 647 aa17.16■□□□□ 0.34
TSPO-201ENST00000329563 SENP2Q9HC62 589 aa17.16■□□□□ 0.34
TSPO-201ENST00000329563 MYO9BQ13459 2157 aa17.16■□□□□ 0.34
TSPO-201ENST00000329563 RPS6P62753 249 aaKnown RBP17.15■□□□□ 0.34
TSPO-201ENST00000329563 SLC35G1Q2M3R5 365 aa17.15■□□□□ 0.34
TSPO-201ENST00000329563 CCDC178Q5BJE1 867 aa17.15■□□□□ 0.34
TSPO-201ENST00000329563 RNF207Q6ZRF8 634 aa17.15■□□□□ 0.34
TSPO-201ENST00000329563 NOL8Q76FK4 1167 aaKnown RBP17.15■□□□□ 0.34
TSPO-201ENST00000329563 SEZ6LQ9BYH1 1024 aa17.15■□□□□ 0.34
TSPO-201ENST00000329563 CNNM2Q9H8M5 875 aa17.15■□□□□ 0.34
TSPO-201ENST00000329563 JMJD4Q9H9V9 463 aa17.15■□□□□ 0.34
TSPO-201ENST00000329563 PNMA2Q9UL42 364 aa17.15■□□□□ 0.34
TSPO-201ENST00000329563 ZEB2O60315 1214 aa17.14■□□□□ 0.33
TSPO-201ENST00000329563 CABYRO75952 493 aa17.14■□□□□ 0.33
TSPO-201ENST00000329563 TIMP1P01033 207 aa17.14■□□□□ 0.33
TSPO-201ENST00000329563 PPIGQ13427 754 aaKnown RBP eCLIP17.14■□□□□ 0.33
TSPO-201ENST00000329563 COL9A3Q14050 684 aaPredicted RBP17.14■□□□□ 0.33
TSPO-201ENST00000329563 CXCL17Q6UXB2 119 aa17.14■□□□□ 0.33
TSPO-201ENST00000329563 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.14■□□□□ 0.33
TSPO-201ENST00000329563 C22orf23Q9BZE7 217 aa17.14■□□□□ 0.33
TSPO-201ENST00000329563 VTA1Q9NP79 307 aa17.14■□□□□ 0.33
TSPO-201ENST00000329563 COL20A1Q9P218 1284 aa17.14■□□□□ 0.33
TSPO-201ENST00000329563 GRIN2DO15399 1336 aa17.14■□□□□ 0.33
TSPO-201ENST00000329563 ARVCFO00192 962 aa17.13■□□□□ 0.33
TSPO-201ENST00000329563 DYNC1LI2O43237 492 aaPredicted RBP17.13■□□□□ 0.33
TSPO-201ENST00000329563 EDNRBP24530 442 aa17.13■□□□□ 0.33
TSPO-201ENST00000329563 HSPA4P34932 840 aa17.13■□□□□ 0.33
TSPO-201ENST00000329563 QRICH1Q2TAL8 776 aa17.13■□□□□ 0.33
TSPO-201ENST00000329563 ASPRV1Q53RT3 343 aa17.13■□□□□ 0.33
TSPO-201ENST00000329563 IFIT1BQ5T764 474 aaKnown RBP17.13■□□□□ 0.33
TSPO-201ENST00000329563 IQSEC1Q6DN90 963 aa17.13■□□□□ 0.33
TSPO-201ENST00000329563 MFSD5Q6N075 450 aa17.13■□□□□ 0.33
TSPO-201ENST00000329563 TMEM199Q8N511 208 aa17.13■□□□□ 0.33
TSPO-201ENST00000329563 UBAC1Q9BSL1 405 aa17.13■□□□□ 0.33
TSPO-201ENST00000329563 AP5M1Q9H0R1 490 aa17.13■□□□□ 0.33
TSPO-201ENST00000329563 SEMA6BQ9H3T3 888 aa17.13■□□□□ 0.33
TSPO-201ENST00000329563 ADD3Q9UEY8 706 aaKnown RBP17.13■□□□□ 0.33
TSPO-201ENST00000329563 TBX21Q9UL17 535 aa17.13■□□□□ 0.33
TSPO-201ENST00000329563 RBM8AQ9Y5S9 174 aaKnown RBP17.13■□□□□ 0.33
TSPO-201ENST00000329563 CDH23Q9H251 3354 aa17.12■□□□□ 0.33
TSPO-201ENST00000329563 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.12■□□□□ 0.33
TSPO-201ENST00000329563 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.12■□□□□ 0.33
TSPO-201ENST00000329563 RBM47A0AV96 593 aaKnown RBP17.12■□□□□ 0.33
TSPO-201ENST00000329563 E7EWF7 191 aa17.12■□□□□ 0.33
TSPO-201ENST00000329563 OPLAHO14841 1288 aa17.12■□□□□ 0.33
TSPO-201ENST00000329563 PPP1R11O60927 126 aaPredicted RBP17.12■□□□□ 0.33
TSPO-201ENST00000329563 PARP1P09874 1014 aaKnown RBP17.12■□□□□ 0.33
TSPO-201ENST00000329563 RBM25P49756 843 aaKnown RBP17.12■□□□□ 0.33
TSPO-201ENST00000329563 ANTXR2P58335 489 aa17.12■□□□□ 0.33
TSPO-201ENST00000329563 ANAPC15P60006 121 aa17.12■□□□□ 0.33
TSPO-201ENST00000329563 NECTIN1Q15223 517 aa17.12■□□□□ 0.33
TSPO-201ENST00000329563 FSCN1Q16658 493 aaKnown RBP17.12■□□□□ 0.33
TSPO-201ENST00000329563 CHST3Q7LGC8 479 aa17.12■□□□□ 0.33
TSPO-201ENST00000329563 FAM126BQ8IXS8 530 aa17.12■□□□□ 0.33
TSPO-201ENST00000329563 IL27Q8NEV9 243 aa17.12■□□□□ 0.33
TSPO-201ENST00000329563 MPHOSPH6Q99547 160 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms