RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ECM2O94769 699 aaPredicted RBP14.17□□□□□ -0.14
CCDC60-201ENST00000327554 SSBP05455 408 aaKnown RBP eCLIP14.17□□□□□ -0.14
CCDC60-201ENST00000327554 KIF11P52732 1056 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 BYSLQ13895 437 aaKnown RBP14.17□□□□□ -0.14
CCDC60-201ENST00000327554 KCNB1Q14721 858 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 SEC23AQ15436 765 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 QPCTQ16769 361 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 LRCH2Q5VUJ6 765 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 TYW1BQ6NUM6 668 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 C3orf20Q8ND61 904 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 NOC3LQ8WTT2 800 aaKnown RBP14.17□□□□□ -0.14
CCDC60-201ENST00000327554 ERGIC2Q96RQ1 377 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 ISCA1Q9BUE6 129 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 ATP6V0A4Q9HBG4 840 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.17□□□□□ -0.14
CCDC60-201ENST00000327554 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.17□□□□□ -0.14
CCDC60-201ENST00000327554 COL22A1Q8NFW1 1626 aaPredicted RBP14.17□□□□□ -0.14
CCDC60-201ENST00000327554 UBR2Q8IWV8 1755 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 PSMA7O14818 248 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 NKRFO15226 690 aaKnown RBP eCLIP14.17□□□□□ -0.14
CCDC60-201ENST00000327554 PRKAB2O43741 272 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 CSF1RP07333 972 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 PHKA1P46020 1223 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 NAALADL2Q58DX5 795 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 KLHDC7AQ5VTJ3 777 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 CCDC155Q8N6L0 562 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 EEF2KMTQ96G04 330 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 PCMTD1Q96MG8 357 aaPredicted RBP14.17□□□□□ -0.14
CCDC60-201ENST00000327554 SLC12A6Q9UHW9 1150 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 PLAAQ9Y263 795 aa14.17□□□□□ -0.14
CCDC60-201ENST00000327554 GMNCA6NCL1 334 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 PJA2O43164 708 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 NEBLO76041 1014 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 EZRP15311 586 aaKnown RBP14.16□□□□□ -0.14
CCDC60-201ENST00000327554 ERCC3P19447 782 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 HPDP32754 393 aaPredicted RBP14.16□□□□□ -0.14
CCDC60-201ENST00000327554 HSPA9P38646 679 aaKnown RBP14.16□□□□□ -0.14
CCDC60-201ENST00000327554 EIF4A3P38919 411 aaKnown RBP14.16□□□□□ -0.14
CCDC60-201ENST00000327554 STAT6P42226 847 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 IFIT5Q13325 482 aaKnown RBP14.16□□□□□ -0.14
CCDC60-201ENST00000327554 TRADDQ15628 312 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 CFAP221Q4G0U5 840 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 CSGALNACT2Q8N6G5 542 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 VGLL2Q8N8G2 317 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 GIMAP8Q8ND71 665 aaPredicted RBP14.16□□□□□ -0.14
CCDC60-201ENST00000327554 TTLL11Q8NHH1 800 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 WHAMMQ8TF30 809 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 MTMR8Q96EF0 704 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 CNOT6LQ96LI5 555 aaKnown RBP14.16□□□□□ -0.14
CCDC60-201ENST00000327554 SCLT1Q96NL6 688 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 V9GY48 417 aaPredicted RBP14.16□□□□□ -0.14
CCDC60-201ENST00000327554 MYH1P12882 1939 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 TRAPPC3O43617 180 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 PLEKHA8P1O95397 391 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 PCCAP05165 728 aaPredicted RBP14.16□□□□□ -0.14
CCDC60-201ENST00000327554 ARID4AP29374 1257 aaPredicted RBP14.16□□□□□ -0.14
CCDC60-201ENST00000327554 CLNS1AP54105 237 aaKnown RBP14.16□□□□□ -0.14
CCDC60-201ENST00000327554 XRCC4Q13426 336 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 E2F5Q15329 346 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 LACTB2Q53H82 288 aaPredicted RBP14.16□□□□□ -0.14
CCDC60-201ENST00000327554 C2CD5Q86YS7 1000 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 ZSCAN29Q8IWY8 852 aaPredicted RBP14.16□□□□□ -0.14
CCDC60-201ENST00000327554 UBAC1Q9BSL1 405 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 LEMD3Q9Y2U8 911 aa14.16□□□□□ -0.14
CCDC60-201ENST00000327554 RTL9Q8NET4 1388 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 TRPM3Q9HCF6 1732 aaPredicted RBP14.15□□□□□ -0.14
CCDC60-201ENST00000327554 C5orf60A6NFR6 353 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 OPLAHO14841 1288 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 RHOBTB3O94955 611 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 MCM7P33993 719 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 SCTRP47872 440 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 CABP4P57796 275 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 PPP2R5BQ15173 497 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 CDC37Q16543 378 aaPredicted RBP14.15□□□□□ -0.14
CCDC60-201ENST00000327554 MAATS1Q7Z4T9 603 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 ARFGAP2Q8N6H7 521 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 PLA2G12BQ9BX93 195 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 PLCB1Q9NQ66 1216 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 NLRP2Q9NX02 1062 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 TNKSO95271 1327 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 EPHB6O15197 1021 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 MGRN1O60291 552 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 ANKRD13CQ8N6S4 541 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 MAGEB6Q8N7X4 407 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 RBM33Q96EV2 1170 aaKnown RBP14.15□□□□□ -0.14
CCDC60-201ENST00000327554 DHTKD1Q96HY7 919 aaPredicted RBP14.15□□□□□ -0.14
CCDC60-201ENST00000327554 SEC16BQ96JE7 1060 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 DISC1Q9NRI5 854 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 RNF14Q9UBS8 474 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 ARAP2Q8WZ64 1704 aa14.15□□□□□ -0.14
CCDC60-201ENST00000327554 DLEC1Q9Y238 1755 aa14.14□□□□□ -0.15
CCDC60-201ENST00000327554 A0A1B0GUA9 196 aa14.14□□□□□ -0.15
CCDC60-201ENST00000327554 ANKRD18BA2A2Z9 1011 aa14.14□□□□□ -0.15
CCDC60-201ENST00000327554 H0YGN5 161 aa14.14□□□□□ -0.15
CCDC60-201ENST00000327554 ADAMTS3O15072 1205 aa14.14□□□□□ -0.15
CCDC60-201ENST00000327554 SLC8A1P32418 973 aa14.14□□□□□ -0.15
CCDC60-201ENST00000327554 LONP1P36776 959 aaKnown RBP14.14□□□□□ -0.15
CCDC60-201ENST00000327554 MAGEA1P43355 309 aa14.14□□□□□ -0.15
CCDC60-201ENST00000327554 LRIG3Q6UXM1 1119 aa14.14□□□□□ -0.15
CCDC60-201ENST00000327554 FMNL3Q8IVF7 1028 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms