RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 TTC38Q5R3I4 469 aa11.7□□□□□ -0.54
VIPAS39-201ENST00000327028 FAM43AQ8N2R8 423 aa11.7□□□□□ -0.54
VIPAS39-201ENST00000327028 ANO3Q9BYT9 981 aa11.7□□□□□ -0.54
VIPAS39-201ENST00000327028 MAF1Q9H063 256 aa11.7□□□□□ -0.54
VIPAS39-201ENST00000327028 GDPD2Q9HCC8 539 aa11.7□□□□□ -0.54
VIPAS39-201ENST00000327028 ZCCHC17Q9NP64 241 aaKnown RBP11.7□□□□□ -0.54
VIPAS39-201ENST00000327028 HOMER2Q9NSB8 354 aa11.7□□□□□ -0.54
VIPAS39-201ENST00000327028 RABGAP1Q9Y3P9 1069 aa11.7□□□□□ -0.54
VIPAS39-201ENST00000327028 CLIC4Q9Y696 253 aa11.7□□□□□ -0.54
VIPAS39-201ENST00000327028 MYH7BA7E2Y1 1941 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 CFBP00751 764 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 CEBPZQ03701 1054 aaKnown RBP11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 INF2Q27J81 1249 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 RIOX2Q8IUF8 465 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 PARK7Q99497 189 aaKnown RBP11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 PTPN18Q99952 460 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 PAGR1Q9BTK6 254 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 SPATC1LQ9H0A9 340 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 CREBZFQ9NS37 354 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 MAP3K20Q9NYL2 800 aaKnown RBP11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 RCOR1Q9UKL0 485 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 RIPK3Q9Y572 518 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 CYP2C8P10632 490 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 HOXA13P31271 388 aaPredicted RBP11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 COPB2P35606 906 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 APLP1P51693 650 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 NBR1Q14596 966 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 PLS1Q14651 629 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 SF3A1Q15459 793 aaKnown RBP11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 NEK8Q86SG6 692 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 LINC00301Q8NCQ3 95 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 CHST13Q8NET6 341 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 TBCKQ8TEA7 893 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 PGBD1Q96JS3 809 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 ACAD9Q9H845 621 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 RBPJLQ9UBG7 517 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 PCDHB6Q9Y5E3 794 aa11.69□□□□□ -0.54
VIPAS39-201ENST00000327028 SPDYE3A6NKU9 549 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 WNT7AO00755 349 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 BMP15O95972 392 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 INHBEP58166 350 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 SLC39A14Q15043 492 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 STK38Q15208 465 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 PTPAQ15257 358 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 KCNG4Q8TDN1 519 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 SMCR8Q8TEV9 937 aaPredicted RBP11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 TBC1D5Q92609 795 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 LMBRD1Q9NUN5 540 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 CEP131Q9UPN4 1083 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 MORC2Q9Y6X9 1032 aaPredicted RBP11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 RASSF10A6NK89 507 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 ATP2B1P20020 1258 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 GCLCP48506 637 aaPredicted RBP11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 SREBF2Q12772 1141 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 ORC2Q13416 577 aaPredicted RBP11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 EHMT1Q9H9B1 1298 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 TXNRD2Q9NNW7 524 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 FBXO40Q9UH90 709 aa11.68□□□□□ -0.54
VIPAS39-201ENST00000327028 IGF2BP3O00425 579 aaKnown RBP eCLIP11.67□□□□□ -0.54
VIPAS39-201ENST00000327028 PRPF40AO75400 957 aaKnown RBP11.67□□□□□ -0.54
VIPAS39-201ENST00000327028 SLC25A27O95847 323 aa11.67□□□□□ -0.54
VIPAS39-201ENST00000327028 SREBF1P36956 1147 aa11.67□□□□□ -0.54
VIPAS39-201ENST00000327028 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.67□□□□□ -0.54
VIPAS39-201ENST00000327028 MOV10L1Q9BXT6 1211 aaKnown RBP11.67□□□□□ -0.54
VIPAS39-201ENST00000327028 SPTLC2O15270 562 aa11.67□□□□□ -0.54
VIPAS39-201ENST00000327028 PEX10O60683 326 aa11.67□□□□□ -0.54
VIPAS39-201ENST00000327028 SLC30A10Q6XR72 485 aa11.67□□□□□ -0.54
VIPAS39-201ENST00000327028 RNF207Q6ZRF8 634 aa11.67□□□□□ -0.54
VIPAS39-201ENST00000327028 FCHSD1Q86WN1 690 aa11.67□□□□□ -0.54
VIPAS39-201ENST00000327028 CRYGNQ8WXF5 182 aa11.67□□□□□ -0.54
VIPAS39-201ENST00000327028 NAP1L4Q99733 375 aaKnown RBP11.67□□□□□ -0.54
VIPAS39-201ENST00000327028 MORF4L1Q9UBU8 362 aa11.67□□□□□ -0.54
VIPAS39-201ENST00000327028 ERVK-9P63128 1117 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 ERVK-24P63145 666 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 ZNF174Q15697 407 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 LETM2Q2VYF4 491 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 CYP4F22Q6NT55 531 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 NSMFQ6X4W1 530 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 PAXIP1Q6ZW49 1069 aaPredicted RBP11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 IFNL1Q8IU54 200 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 JMYQ8N9B5 988 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 SHCBP1Q8NEM2 672 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 SYTL5Q8TDW5 730 aaPredicted RBP11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 LCTP09848 1927 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 FRMPD4Q14CM0 1322 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 RPTORQ8N122 1335 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 ADGRA2Q96PE1 1338 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 PPP6R2O75170 966 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 GCFC2P16383 781 aaKnown RBP11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 MCM7P33993 719 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 USP11P51784 963 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 RPS6P62753 249 aaKnown RBP11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 ARHGAP4P98171 946 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 MOXD1Q6UVY6 613 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 COL20A1Q9P218 1284 aa11.66□□□□□ -0.54
VIPAS39-201ENST00000327028 EDIL3O43854 480 aa11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 CCNT1O60563 726 aaKnown RBP11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 UBE2HP62256 183 aa11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 ATP2C1P98194 919 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms