RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 STIM1Q13586 685 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 CRY2Q49AN0 593 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 APOBEC3HQ6NTF7 200 aaKnown RBP11.94□□□□□ -0.5
CUL4A-201ENST00000326335 SMCR8Q8TEV9 937 aaPredicted RBP11.94□□□□□ -0.5
CUL4A-201ENST00000326335 AGPAT5Q9NUQ2 364 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 KIAA1024Q9UPX6 916 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 ATF5Q9Y2D1 282 aaPredicted RBP11.94□□□□□ -0.5
CUL4A-201ENST00000326335 BTAF1O14981 1849 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 DUOX1Q9NRD9 1551 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 SPATA31A6Q5VVP1 1343 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 ERICH4A6NGS2 130 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 CLSTN1O94985 981 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 SHMT1P34896 483 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 PPP4CP60510 307 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 SP4Q02446 784 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 E2F4Q16254 413 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 IKZF4Q9H2S9 585 aa11.94□□□□□ -0.5
CUL4A-201ENST00000326335 POTEB3A0JP26 581 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 POTECB2RU33 542 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 ZBTB7AO95365 584 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 IL1R1P14778 569 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 RNASE9P60153 205 aaKnown RBP11.93□□□□□ -0.5
CUL4A-201ENST00000326335 PABPC4Q13310 644 aaKnown RBP eCLIP11.93□□□□□ -0.5
CUL4A-201ENST00000326335 SYCP1Q15431 976 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 QRICH1Q2TAL8 776 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 POTEBQ6S5H4 581 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 SP8Q8IXZ3 490 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 LARGE2Q8N3Y3 721 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 COA1Q9GZY4 146 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 DDX25Q9UHL0 483 aaKnown RBP11.93□□□□□ -0.5
CUL4A-201ENST00000326335 ARHGAP6O43182 974 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 SRGAP2O75044 1071 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 ZMYND10O75800 440 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 BMP15O95972 392 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 FGRP09769 529 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 NPR1P16066 1061 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 ZNF18P17022 549 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 JAG1P78504 1218 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 NR1I3Q14994 352 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 ANKRD40Q6AI12 368 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 KRT26Q7Z3Y9 468 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 NOC4LQ9BVI4 516 aaKnown RBP11.93□□□□□ -0.5
CUL4A-201ENST00000326335 HDAC6Q9UBN7 1215 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 POTEFA5A3E0 1075 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 ZSCAN12O43309 604 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 POTEIP0CG38 1075 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 PCP11498 1178 aaKnown RBP11.93□□□□□ -0.5
CUL4A-201ENST00000326335 KRT79Q5XKE5 535 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 POTEGQ6S5H5 508 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 POTEEQ6S8J3 1075 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 KRT25Q7Z3Z0 450 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 ACER1Q8TDN7 264 aa11.93□□□□□ -0.5
CUL4A-201ENST00000326335 ADD3Q9UEY8 706 aaKnown RBP11.93□□□□□ -0.5
CUL4A-201ENST00000326335 TNRC6CQ9HCJ0 1690 aaKnown RBP11.93□□□□□ -0.5
CUL4A-201ENST00000326335 TTC26A0AVF1 554 aa11.92□□□□□ -0.5
CUL4A-201ENST00000326335 CCDC175P0C221 793 aa11.92□□□□□ -0.5
CUL4A-201ENST00000326335 LONP1P36776 959 aaKnown RBP11.92□□□□□ -0.5
CUL4A-201ENST00000326335 TMEM266Q2M3C6 531 aa11.92□□□□□ -0.5
CUL4A-201ENST00000326335 TCP11X2Q5H9J9 407 aa11.92□□□□□ -0.5
CUL4A-201ENST00000326335 TCERG1LQ5VWI1 586 aa11.92□□□□□ -0.5
CUL4A-201ENST00000326335 KIAA1328Q86T90 577 aa11.92□□□□□ -0.5
CUL4A-201ENST00000326335 REXO1L1PQ8IX06 675 aa11.92□□□□□ -0.5
CUL4A-201ENST00000326335 C4orf32Q8N8J7 132 aa11.92□□□□□ -0.5
CUL4A-201ENST00000326335 FBXO28Q9NVF7 368 aa11.92□□□□□ -0.5
CUL4A-201ENST00000326335 PCDHA12Q9UN75 941 aa11.92□□□□□ -0.5
CUL4A-201ENST00000326335 PLEKP08567 350 aaPredicted RBP11.92□□□□□ -0.5
CUL4A-201ENST00000326335 ZNF658Q5TYW1 1059 aaPredicted RBP11.92□□□□□ -0.5
CUL4A-201ENST00000326335 SV2BQ7L1I2 683 aa11.92□□□□□ -0.5
CUL4A-201ENST00000326335 CCDC47Q96A33 483 aaKnown RBP11.92□□□□□ -0.5
CUL4A-201ENST00000326335 DNAJC18Q9H819 358 aa11.92□□□□□ -0.5
CUL4A-201ENST00000326335 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.92□□□□□ -0.54e-7■□□□□ 11.3
CUL4A-201ENST00000326335 DUSP10Q9Y6W6 482 aa11.92□□□□□ -0.5
CUL4A-201ENST00000326335 MYMKA6NI61 221 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 TRAF5O00463 557 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 ALDH1B1P30837 517 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 PDE6BP35913 854 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 CDC37Q16543 378 aaPredicted RBP11.91□□□□□ -0.5
CUL4A-201ENST00000326335 ECM1Q16610 540 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 KSR1Q8IVT5 923 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 PIGOQ8TEQ8 1089 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 MASTLQ96GX5 879 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 TUBGCP2Q9BSJ2 902 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 FGFBP2Q9BYJ0 223 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 IRS2Q9Y4H2 1338 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 F5H6K3 240 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 ZBTB39O15060 712 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 KLRC3Q07444 240 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 SLC35F6Q8N357 371 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 CNOT6LQ96LI5 555 aaKnown RBP11.91□□□□□ -0.5
CUL4A-201ENST00000326335 FEZ1Q99689 392 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 DEF6Q9H4E7 631 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 ADRA2BP18089 450 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 ERCC5P28715 1186 aaPredicted RBP11.91□□□□□ -0.5
CUL4A-201ENST00000326335 ABCB5Q2M3G0 1257 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 TDRD12Q587J7 1177 aaKnown RBP11.91□□□□□ -0.5
CUL4A-201ENST00000326335 HERC4Q5GLZ8 1057 aaPredicted RBP11.91□□□□□ -0.5
CUL4A-201ENST00000326335 TMEM39BQ9GZU3 492 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 ZMYND12Q9H0C1 365 aa11.91□□□□□ -0.5
CUL4A-201ENST00000326335 MYO1BO43795 1136 aa11.9□□□□□ -0.5
CUL4A-201ENST00000326335 ZNF543Q08ER8 600 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms