RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 PCDHA13Q9Y5I0 950 aa8.66□□□□□ -1.02
CD46-201ENST00000322875 DLEC1Q9Y238 1755 aa8.66□□□□□ -1.02
CD46-201ENST00000322875 EME2A4GXA9 379 aaPredicted RBP8.65□□□□□ -1.02
CD46-201ENST00000322875 TRIM49BA6NDI0 452 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 ZSCAN5CA6NGD5 496 aaPredicted RBP8.65□□□□□ -1.02
CD46-201ENST00000322875 F8W031 263 aaPredicted RBP8.65□□□□□ -1.02
CD46-201ENST00000322875 MOCS3O95396 460 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 KLK7P49862 253 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 SEMA3FQ13275 785 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 ASTE1Q2TB18 679 aaPredicted RBP8.65□□□□□ -1.02
CD46-201ENST00000322875 ARFGAP2Q8N6H7 521 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 STAMQ92783 540 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 CUL5Q93034 780 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 ZNF496Q96IT1 587 aaPredicted RBP8.65□□□□□ -1.02
CD46-201ENST00000322875 L3MBTL3Q96JM7 780 aaPredicted RBP8.65□□□□□ -1.02
CD46-201ENST00000322875 DUSP9Q99956 384 aaKnown RBP8.65□□□□□ -1.02
CD46-201ENST00000322875 CENPHQ9H3R5 247 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 INCENPQ9NQS7 918 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 EXOC1Q9NV70 894 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 RMND1Q9NWS8 449 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.65□□□□□ -1.022e-10■■■□□ 19.2
CD46-201ENST00000322875 IFIT3O14879 490 aaKnown RBP8.65□□□□□ -1.02
CD46-201ENST00000322875 FUT2Q10981 343 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 UBE3CQ15386 1083 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 UAP1Q16222 522 aaPredicted RBP8.65□□□□□ -1.02
CD46-201ENST00000322875 TSR1Q2NL82 804 aaKnown RBP8.65□□□□□ -1.02
CD46-201ENST00000322875 NFXL1Q6ZNB6 911 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 KRT26Q7Z3Y9 468 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 TRIM22Q8IYM9 498 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 ACSBG1Q96GR2 724 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 PYM1Q9BRP8 204 aaKnown RBP8.65□□□□□ -1.02
CD46-201ENST00000322875 SLC39A2Q9NP94 309 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 RIC1Q4ADV7 1423 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 C1orf167Q5SNV9 1468 aa8.65□□□□□ -1.02
CD46-201ENST00000322875 KLRC4O43908 158 aa8.65□□□□□ -1.03
CD46-201ENST00000322875 SMNDC1O75940 238 aaKnown RBP eCLIP8.65□□□□□ -1.032e-8■□□□□ 9.9
CD46-201ENST00000322875 PLEKP08567 350 aaPredicted RBP8.65□□□□□ -1.03
CD46-201ENST00000322875 DRD4P21917 467 aa8.65□□□□□ -1.03
CD46-201ENST00000322875 KCNB1Q14721 858 aa8.65□□□□□ -1.03
CD46-201ENST00000322875 E2F5Q15329 346 aa8.65□□□□□ -1.03
CD46-201ENST00000322875 RTN1Q16799 776 aa8.65□□□□□ -1.03
CD46-201ENST00000322875 PI16Q6UXB8 463 aa8.65□□□□□ -1.03
CD46-201ENST00000322875 BZW1Q7L1Q6 419 aaKnown RBP8.65□□□□□ -1.03
CD46-201ENST00000322875 LMBR1Q8WVP7 490 aa8.65□□□□□ -1.03
CD46-201ENST00000322875 NDST4Q9H3R1 872 aa8.65□□□□□ -1.03
CD46-201ENST00000322875 EPB41L5Q9HCM4 733 aa8.65□□□□□ -1.03
CD46-201ENST00000322875 HOMER3Q9NSC5 361 aa8.65□□□□□ -1.03
CD46-201ENST00000322875 CNOT8Q9UFF9 292 aaKnown RBP8.65□□□□□ -1.03
CD46-201ENST00000322875 PLAAQ9Y263 795 aa8.65□□□□□ -1.03
CD46-201ENST00000322875 C15orf41Q9Y2V0 281 aa8.65□□□□□ -1.03
CD46-201ENST00000322875 MYH10P35580 1976 aa8.65□□□□□ -1.03
CD46-201ENST00000322875 RREB1Q92766 1687 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 GRID2IPA4D2P6 1211 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 B4DLN1 442 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 ORC4O43929 436 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 HEXIM1O94992 359 aaKnown RBP8.64□□□□□ -1.03
CD46-201ENST00000322875 GSTA1P08263 222 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 CXCR5P32302 372 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 MCAMP43121 646 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 ZNF844Q08AG5 666 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 TCIRG1Q13488 830 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 BIRC3Q13489 604 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 BIRC2Q13490 618 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 KIRREL3Q8IZU9 778 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 NOC3LQ8WTT2 800 aaKnown RBP8.64□□□□□ -1.03
CD46-201ENST00000322875 RAPGEF5Q92565 580 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 IQCDQ96DY2 449 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 SCLT1Q96NL6 688 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 RNF26Q9BY78 433 aaPredicted RBP8.64□□□□□ -1.03
CD46-201ENST00000322875 EPB41L4AQ9HCS5 686 aaPredicted RBP8.64□□□□□ -1.03
CD46-201ENST00000322875 PPANQ9NQ55 473 aaKnown RBP8.64□□□□□ -1.03
CD46-201ENST00000322875 ARAP2Q8WZ64 1704 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 RBAK-RBAKDNI3L0D1 243 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 IRF6O14896 467 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 LIN7AO14910 233 aaPredicted RBP8.64□□□□□ -1.03
CD46-201ENST00000322875 PPP1R12BO60237 982 aaPredicted RBP8.64□□□□□ -1.03
CD46-201ENST00000322875 USO1O60763 962 aaKnown RBP8.64□□□□□ -1.03
CD46-201ENST00000322875 SNRPA1P09661 255 aaKnown RBP8.64□□□□□ -1.03
CD46-201ENST00000322875 TRADDQ15628 312 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 AGBL2Q5U5Z8 902 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 HVCN1Q96D96 273 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 STRBPQ96SI9 672 aaKnown RBP8.64□□□□□ -1.03
CD46-201ENST00000322875 SH3GL3Q99963 347 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 IFIH1Q9BYX4 1025 aaKnown RBP8.64□□□□□ -1.03
CD46-201ENST00000322875 BSDC1Q9NW68 430 aaPredicted RBP8.64□□□□□ -1.03
CD46-201ENST00000322875 ZNHIT6Q9NWK9 470 aaKnown RBP8.64□□□□□ -1.03
CD46-201ENST00000322875 TSKSQ9UJT2 592 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 UBR2Q8IWV8 1755 aa8.64□□□□□ -1.03
CD46-201ENST00000322875 NCK2O43639 380 aa8.63□□□□□ -1.03
CD46-201ENST00000322875 HSD17B3P37058 310 aa8.63□□□□□ -1.03
CD46-201ENST00000322875 MATR3P43243 847 aaKnown RBP eCLIP8.63□□□□□ -1.035e-7■■■■■ 27
CD46-201ENST00000322875 SARNPP82979 210 aaKnown RBP8.63□□□□□ -1.03
CD46-201ENST00000322875 GUCY2DQ02846 1103 aa8.63□□□□□ -1.03
CD46-201ENST00000322875 CFAP221Q4G0U5 840 aa8.63□□□□□ -1.03
CD46-201ENST00000322875 MIS18BP1Q6P0N0 1132 aa8.63□□□□□ -1.03
CD46-201ENST00000322875 RNF10Q8N5U6 811 aaKnown RBP8.63□□□□□ -1.03
CD46-201ENST00000322875 KCNH5Q8NCM2 988 aa8.63□□□□□ -1.03
CD46-201ENST00000322875 GIMAP8Q8ND71 665 aaPredicted RBP8.63□□□□□ -1.03
CD46-201ENST00000322875 NSMCE1Q8WV22 266 aa8.63□□□□□ -1.03
CD46-201ENST00000322875 CENPTQ96BT3 561 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms