RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 PDE1AP54750 535 aa16.78■□□□□ 0.28
RPP40-201ENST00000319533 BAATQ14032 418 aaPredicted RBP16.78■□□□□ 0.28
RPP40-201ENST00000319533 RAB30Q15771 203 aa16.78■□□□□ 0.28
RPP40-201ENST00000319533 AKNAD1Q5T1N1 836 aa16.78■□□□□ 0.28
RPP40-201ENST00000319533 SYDE2Q5VT97 1194 aa16.78■□□□□ 0.28
RPP40-201ENST00000319533 NSMFQ6X4W1 530 aa16.78■□□□□ 0.28
RPP40-201ENST00000319533 EEPD1Q7L9B9 569 aa16.78■□□□□ 0.28
RPP40-201ENST00000319533 VWCEQ96DN2 955 aa16.78■□□□□ 0.28
RPP40-201ENST00000319533 CRBNQ96SW2 442 aa16.78■□□□□ 0.28
RPP40-201ENST00000319533 TMEM47Q9BQJ4 181 aa16.78■□□□□ 0.28
RPP40-201ENST00000319533 MTIF3Q9H2K0 278 aaKnown RBP16.78■□□□□ 0.28
RPP40-201ENST00000319533 CXXC1Q9P0U4 656 aaPredicted RBP16.78■□□□□ 0.28
RPP40-201ENST00000319533 B4GALT4O60513 344 aa16.77■□□□□ 0.28
RPP40-201ENST00000319533 SLC16A2P36021 539 aa16.77■□□□□ 0.28
RPP40-201ENST00000319533 ALDH5A1P51649 535 aaPredicted RBP16.77■□□□□ 0.28
RPP40-201ENST00000319533 CCDC96Q2M329 555 aa16.77■□□□□ 0.28
RPP40-201ENST00000319533 MCMDC2Q4G0Z9 681 aa16.77■□□□□ 0.28
RPP40-201ENST00000319533 ANKRD45Q5TZF3 282 aa16.77■□□□□ 0.28
RPP40-201ENST00000319533 KIAA1211Q6ZU35 1233 aa16.77■□□□□ 0.28
RPP40-201ENST00000319533 CLEC4DQ8WXI8 215 aa16.77■□□□□ 0.28
RPP40-201ENST00000319533 TRPV6Q9H1D0 765 aa16.77■□□□□ 0.28
RPP40-201ENST00000319533 WNT8AQ9H1J5 351 aa16.77■□□□□ 0.28
RPP40-201ENST00000319533 PNMA2Q9UL42 364 aa16.77■□□□□ 0.28
RPP40-201ENST00000319533 NFIBO00712 420 aa16.76■□□□□ 0.27
RPP40-201ENST00000319533 SNHG28P0DPA3 235 aa16.76■□□□□ 0.27
RPP40-201ENST00000319533 PDHBP11177 359 aa16.76■□□□□ 0.27
RPP40-201ENST00000319533 PSMC6P62333 389 aa16.76■□□□□ 0.27
RPP40-201ENST00000319533 HDAC1Q13547 482 aaPredicted RBP16.76■□□□□ 0.27
RPP40-201ENST00000319533 TJAP1Q5JTD0 557 aa16.76■□□□□ 0.27
RPP40-201ENST00000319533 FAM227BQ96M60 508 aa16.76■□□□□ 0.27
RPP40-201ENST00000319533 TTC14Q96N46 770 aa16.76■□□□□ 0.27
RPP40-201ENST00000319533 GAS2L1Q99501 681 aaPredicted RBP16.76■□□□□ 0.27
RPP40-201ENST00000319533 ALDH8A1Q9H2A2 487 aaPredicted RBP16.76■□□□□ 0.27
RPP40-201ENST00000319533 POLR3EQ9NVU0 708 aa16.76■□□□□ 0.27
RPP40-201ENST00000319533 MSRAQ9UJ68 235 aa16.76■□□□□ 0.27
RPP40-201ENST00000319533 MTMR7Q9Y216 660 aa16.76■□□□□ 0.27
RPP40-201ENST00000319533 WDR19Q8NEZ3 1342 aa16.75■□□□□ 0.27
RPP40-201ENST00000319533 A0A0D9SFI3 127 aa16.75■□□□□ 0.27
RPP40-201ENST00000319533 HSPD1P10809 573 aaKnown RBP16.75■□□□□ 0.27
RPP40-201ENST00000319533 PCP11498 1178 aaKnown RBP16.75■□□□□ 0.27
RPP40-201ENST00000319533 EDNRBP24530 442 aa16.75■□□□□ 0.27
RPP40-201ENST00000319533 CCL23P55773 120 aa16.75■□□□□ 0.27
RPP40-201ENST00000319533 PURAQ00577 322 aaKnown RBP16.75■□□□□ 0.27
RPP40-201ENST00000319533 RPUSD2Q8IZ73 545 aaKnown RBP16.75■□□□□ 0.27
RPP40-201ENST00000319533 WDR11Q9BZH6 1224 aa16.75■□□□□ 0.27
RPP40-201ENST00000319533 PRDM12Q9H4Q4 367 aa16.75■□□□□ 0.27
RPP40-201ENST00000319533 SUPT20HL2P0C7V6 817 aa16.74■□□□□ 0.27
RPP40-201ENST00000319533 CPT1AP50416 773 aa16.74■□□□□ 0.27
RPP40-201ENST00000319533 ZNF543Q08ER8 600 aa16.74■□□□□ 0.27
RPP40-201ENST00000319533 AAMPQ13685 434 aa16.74■□□□□ 0.27
RPP40-201ENST00000319533 ADGRE1Q14246 886 aa16.74■□□□□ 0.27
RPP40-201ENST00000319533 SLC30A10Q6XR72 485 aa16.74■□□□□ 0.27
RPP40-201ENST00000319533 OTOP2Q7RTS6 562 aa16.74■□□□□ 0.27
RPP40-201ENST00000319533 GPCPD1Q9NPB8 672 aa16.74■□□□□ 0.27
RPP40-201ENST00000319533 PRDM6Q9NQX0 595 aa16.74■□□□□ 0.27
RPP40-201ENST00000319533 CHD7Q9P2D1 2997 aa16.74■□□□□ 0.27
RPP40-201ENST00000319533 ZBTB47Q9UFB7 747 aaPredicted RBP16.74■□□□□ 0.27
RPP40-201ENST00000319533 YBX2Q9Y2T7 364 aaKnown RBP16.74■□□□□ 0.27
RPP40-201ENST00000319533 MYO9BQ13459 2157 aa16.74■□□□□ 0.27
RPP40-201ENST00000319533 FRMPD2Q68DX3 1309 aaPredicted RBP16.73■□□□□ 0.27
RPP40-201ENST00000319533 NKRFO15226 690 aaKnown RBP eCLIP16.73■□□□□ 0.27
RPP40-201ENST00000319533 PFKMP08237 780 aa16.73■□□□□ 0.27
RPP40-201ENST00000319533 RRP12Q5JTH9 1297 aaKnown RBP16.73■□□□□ 0.27
RPP40-201ENST00000319533 RNF207Q6ZRF8 634 aa16.73■□□□□ 0.27
RPP40-201ENST00000319533 ZNF589Q86UQ0 364 aaPredicted RBP16.73■□□□□ 0.27
RPP40-201ENST00000319533 RGS22Q8NE09 1264 aa16.73■□□□□ 0.27
RPP40-201ENST00000319533 DNERQ8NFT8 737 aa16.73■□□□□ 0.27
RPP40-201ENST00000319533 ATXN2LQ8WWM7 1075 aaKnown RBP16.73■□□□□ 0.27
RPP40-201ENST00000319533 MAF1Q9H063 256 aa16.73■□□□□ 0.27
RPP40-201ENST00000319533 NKX2-4Q9H2Z4 354 aa16.73■□□□□ 0.27
RPP40-201ENST00000319533 TOMM22Q9NS69 142 aa16.73■□□□□ 0.27
RPP40-201ENST00000319533 SCN10AQ9Y5Y9 1956 aa16.73■□□□□ 0.27
RPP40-201ENST00000319533 GBF1Q92538 1859 aa16.72■□□□□ 0.27
RPP40-201ENST00000319533 PTPDC1A2A3K4 754 aa16.72■□□□□ 0.27
RPP40-201ENST00000319533 A6NJR5 290 aa16.72■□□□□ 0.27
RPP40-201ENST00000319533 NT5C2P49902 561 aa16.72■□□□□ 0.27
RPP40-201ENST00000319533 RPS6P62753 249 aaKnown RBP16.72■□□□□ 0.27
RPP40-201ENST00000319533 NMIQ13287 307 aaPredicted RBP16.72■□□□□ 0.27
RPP40-201ENST00000319533 MTG1Q9BT17 334 aaPredicted RBP16.72■□□□□ 0.27
RPP40-201ENST00000319533 SLC28A3Q9HAS3 691 aa16.72■□□□□ 0.27
RPP40-201ENST00000319533 TRMT13Q9NUP7 481 aaKnown RBP16.72■□□□□ 0.27
RPP40-201ENST00000319533 TNKSO95271 1327 aa16.71■□□□□ 0.27
RPP40-201ENST00000319533 CCDC171Q6TFL3 1326 aa16.71■□□□□ 0.27
RPP40-201ENST00000319533 KPNA6O60684 536 aa16.71■□□□□ 0.27
RPP40-201ENST00000319533 CALML3P27482 149 aa16.71■□□□□ 0.27
RPP40-201ENST00000319533 MFSD6Q6ZSS7 791 aa16.71■□□□□ 0.27
RPP40-201ENST00000319533 OR6J1Q8NGC5 347 aa16.71■□□□□ 0.27
RPP40-201ENST00000319533 SCFD2Q8WU76 684 aa16.71■□□□□ 0.27
RPP40-201ENST00000319533 SCLYQ96I15 445 aa16.71■□□□□ 0.27
RPP40-201ENST00000319533 PCDHA11Q9Y5I1 949 aa16.71■□□□□ 0.27
RPP40-201ENST00000319533 SLC4A7Q9Y6M7 1214 aa16.71■□□□□ 0.27
RPP40-201ENST00000319533 MYL3P08590 195 aa16.7■□□□□ 0.26
RPP40-201ENST00000319533 CYP2C9P11712 490 aa16.7■□□□□ 0.26
RPP40-201ENST00000319533 HAND2P61296 217 aa16.7■□□□□ 0.26
RPP40-201ENST00000319533 PTPN11Q06124 597 aaPredicted RBP16.7■□□□□ 0.26
RPP40-201ENST00000319533 PDE4DQ08499 809 aa16.7■□□□□ 0.26
RPP40-201ENST00000319533 NBPF20Q3BBV1 942 aa16.7■□□□□ 0.26
RPP40-201ENST00000319533 BRDTQ58F21 947 aaPredicted RBP16.7■□□□□ 0.26
RPP40-201ENST00000319533 GPATCH4Q5T3I0 446 aaKnown RBP16.7■□□□□ 0.26
RPP40-201ENST00000319533 NFRKBQ6P4R8 1299 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms