RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 SALL4Q9UJQ4 1053 aa10.73□□□□□ -0.69
PTPRA-202ENST00000318266 PACSIN2Q9UNF0 486 aaPredicted RBP10.73□□□□□ -0.69
PTPRA-202ENST00000318266 PCDHA13Q9Y5I0 950 aa10.73□□□□□ -0.69
PTPRA-202ENST00000318266 ABCC12Q96J65 1359 aa10.73□□□□□ -0.69
PTPRA-202ENST00000318266 HEXIM1O94992 359 aaKnown RBP10.73□□□□□ -0.69
PTPRA-202ENST00000318266 SRGNP10124 158 aa10.73□□□□□ -0.69
PTPRA-202ENST00000318266 EIF4A3P38919 411 aaKnown RBP10.73□□□□□ -0.69
PTPRA-202ENST00000318266 ZBED6P86452 979 aa10.73□□□□□ -0.69
PTPRA-202ENST00000318266 EVX2Q03828 476 aa10.73□□□□□ -0.69
PTPRA-202ENST00000318266 NPY5RQ15761 445 aa10.73□□□□□ -0.69
PTPRA-202ENST00000318266 HLFQ16534 295 aa10.73□□□□□ -0.69
PTPRA-202ENST00000318266 CATIPQ7Z7H3 387 aa10.73□□□□□ -0.69
PTPRA-202ENST00000318266 KIRREL3Q8IZU9 778 aa10.73□□□□□ -0.69
PTPRA-202ENST00000318266 TMTC2Q8N394 836 aa10.73□□□□□ -0.69
PTPRA-202ENST00000318266 SCLT1Q96NL6 688 aa10.73□□□□□ -0.69
PTPRA-202ENST00000318266 MMRN2Q9H8L6 949 aa10.73□□□□□ -0.69
PTPRA-202ENST00000318266 BCCIPQ9P287 314 aaKnown RBP eCLIP10.73□□□□□ -0.69
PTPRA-202ENST00000318266 A0A1W2PQC6 194 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 CHRM1P11229 460 aaPredicted RBP10.72□□□□□ -0.69
PTPRA-202ENST00000318266 EEF1GP26641 437 aaKnown RBP10.72□□□□□ -0.69
PTPRA-202ENST00000318266 KIF11P52732 1056 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 RASSF7Q02833 373 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 E2F5Q15329 346 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 ALX1Q15699 326 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 CCDC40Q4G0X9 1142 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 EMBQ6PCB8 327 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 CCDC13Q8IYE1 715 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 OR2W6PQ8NHA6 318 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 ESR2Q92731 530 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 N4BP2L2Q92802 583 aaPredicted RBP10.72□□□□□ -0.69
PTPRA-202ENST00000318266 CCT8L2Q96SF2 557 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 ARHGAP20Q9P2F6 1191 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.72□□□□□ -0.69
PTPRA-202ENST00000318266 HYOU1Q9Y4L1 999 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 SPEF2Q9C093 1822 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 BMP15O95972 392 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 PDHBP11177 359 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 BCAMP50895 628 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 CEP85LQ5SZL2 805 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 ZBTB38Q8NAP3 1195 aaPredicted RBP10.72□□□□□ -0.69
PTPRA-202ENST00000318266 GPKOWQ92917 476 aaPredicted RBP eCLIP10.72□□□□□ -0.69
PTPRA-202ENST00000318266 TTYH3Q9C0H2 523 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 SH2D4AQ9H788 454 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 KLC4Q9NSK0 619 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 SLIT3O75094 1523 aa10.72□□□□□ -0.69
PTPRA-202ENST00000318266 MYH10P35580 1976 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 IRS4O14654 1257 aaPredicted RBP10.71□□□□□ -0.69
PTPRA-202ENST00000318266 PPP1R37O75864 691 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 FTCDO95954 541 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 CSF1RP07333 972 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 FCER1AP12319 257 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 CDR1P51861 262 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 SKOR1P84550 965 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 HLTFQ14527 1009 aaKnown RBP eCLIP10.71□□□□□ -0.69
PTPRA-202ENST00000318266 ALS2CLQ60I27 953 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 ANKRD40Q6AI12 368 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 KIF6Q6ZMV9 814 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 RRAGAQ7L523 313 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 CCDC170Q8IYT3 715 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 MYCBPAPQ8TBZ2 947 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 CCDC114Q96M63 670 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 ALS2CR12Q96Q35 445 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 KRT12Q99456 494 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 EPN3Q9H201 632 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 TRMT112Q9UI30 125 aaKnown RBP10.71□□□□□ -0.69
PTPRA-202ENST00000318266 CYP7A1P22680 504 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 YY1P25490 414 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 CTSWP56202 376 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 GFPT1Q06210 699 aaPredicted RBP10.71□□□□□ -0.69
PTPRA-202ENST00000318266 FUT2Q10981 343 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 SEC23AQ15436 765 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 PTGISQ16647 500 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 SPRED3Q2MJR0 410 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 TDRD12Q587J7 1177 aaKnown RBP10.71□□□□□ -0.69
PTPRA-202ENST00000318266 TTI2Q6NXR4 508 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 NLRP14Q86W24 1093 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 KLHL7Q8IXQ5 586 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 VGLL2Q8N8G2 317 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 PURBQ96QR8 312 aaKnown RBP10.71□□□□□ -0.69
PTPRA-202ENST00000318266 CAMKK2Q96RR4 588 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 DUSP9Q99956 384 aaKnown RBP10.71□□□□□ -0.69
PTPRA-202ENST00000318266 DISC1Q9NRI5 854 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 DONSONQ9NYP3 566 aa10.71□□□□□ -0.69
PTPRA-202ENST00000318266 DDX60Q8IY21 1712 aaKnown RBP10.71□□□□□ -0.7
PTPRA-202ENST00000318266 RGPD5Q99666 1765 aa10.71□□□□□ -0.7
PTPRA-202ENST00000318266 PRPF3O43395 683 aaKnown RBP10.71□□□□□ -0.7
PTPRA-202ENST00000318266 FSBPO95073 299 aa10.71□□□□□ -0.7
PTPRA-202ENST00000318266 UQCRFS1P1P0C7P4 283 aa10.71□□□□□ -0.7
PTPRA-202ENST00000318266 HMGB2P26583 209 aaKnown RBP10.71□□□□□ -0.7
PTPRA-202ENST00000318266 UBA7P41226 1012 aa10.71□□□□□ -0.7
PTPRA-202ENST00000318266 MAGEA1P43355 309 aa10.71□□□□□ -0.7
PTPRA-202ENST00000318266 NAALADL2Q58DX5 795 aa10.71□□□□□ -0.7
PTPRA-202ENST00000318266 MICALCLQ6ZW33 695 aa10.71□□□□□ -0.7
PTPRA-202ENST00000318266 ADGRA1Q86SQ6 560 aa10.71□□□□□ -0.7
PTPRA-202ENST00000318266 SRBD1Q8N5C6 995 aaKnown RBP10.71□□□□□ -0.7
PTPRA-202ENST00000318266 TNFRSF25Q93038 417 aa10.71□□□□□ -0.7
PTPRA-202ENST00000318266 MTMR8Q96EF0 704 aa10.71□□□□□ -0.7
PTPRA-202ENST00000318266 ZSCAN10Q96SZ4 725 aaPredicted RBP10.71□□□□□ -0.7
PTPRA-202ENST00000318266 RNF41Q9H4P4 317 aaPredicted RBP10.71□□□□□ -0.7
PTPRA-202ENST00000318266 FBXO3Q9UK99 471 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms