RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 ADSSL1Q8N142 457 aa17.88■□□□□ 0.45
CRAT-201ENST00000318080 ANKRD20A12PQ8NF67 263 aa17.88■□□□□ 0.45
CRAT-201ENST00000318080 GPKOWQ92917 476 aaPredicted RBP eCLIP17.88■□□□□ 0.45
CRAT-201ENST00000318080 DNAJC7Q99615 494 aa17.88■□□□□ 0.45
CRAT-201ENST00000318080 DMGDHQ9UI17 866 aaKnown RBP17.88■□□□□ 0.45
CRAT-201ENST00000318080 GYS1P13807 737 aa17.88■□□□□ 0.45
CRAT-201ENST00000318080 CXCR5P32302 372 aa17.88■□□□□ 0.45
CRAT-201ENST00000318080 SPAG1Q07617 926 aa17.88■□□□□ 0.45
CRAT-201ENST00000318080 NBPF5PQ86XG9 351 aaPredicted RBP17.88■□□□□ 0.45
CRAT-201ENST00000318080 C4orf32Q8N8J7 132 aa17.88■□□□□ 0.45
CRAT-201ENST00000318080 JAKMIP2Q96AA8 810 aa17.88■□□□□ 0.45
CRAT-201ENST00000318080 CHRNDQ07001 517 aa17.87■□□□□ 0.45
CRAT-201ENST00000318080 CCNI2Q6ZMN8 369 aaPredicted RBP17.87■□□□□ 0.45
CRAT-201ENST00000318080 TSEN2Q8NCE0 465 aaKnown RBP17.87■□□□□ 0.45
CRAT-201ENST00000318080 FAM107BQ9H098 131 aa17.87■□□□□ 0.45
CRAT-201ENST00000318080 HAUS4Q9H6D7 363 aa17.87■□□□□ 0.45
CRAT-201ENST00000318080 JADE2Q9NQC1 790 aa17.87■□□□□ 0.45
CRAT-201ENST00000318080 TNS1Q9HBL0 1735 aaKnown RBP17.87■□□□□ 0.45
CRAT-201ENST00000318080 LGALS16A8MUM7 142 aa17.87■□□□□ 0.45
CRAT-201ENST00000318080 USP17L12C9JPN9 530 aa17.87■□□□□ 0.45
CRAT-201ENST00000318080 USP17L21D6R901 530 aa17.87■□□□□ 0.45
CRAT-201ENST00000318080 STAT6P42226 847 aa17.87■□□□□ 0.45
CRAT-201ENST00000318080 PAPD7Q5XG87 772 aaKnown RBP17.87■□□□□ 0.45
CRAT-201ENST00000318080 KRT26Q7Z3Y9 468 aa17.87■□□□□ 0.45
CRAT-201ENST00000318080 MTA3Q9BTC8 594 aa17.87■□□□□ 0.45
CRAT-201ENST00000318080 ANAPC4Q9UJX5 808 aa17.87■□□□□ 0.45
CRAT-201ENST00000318080 BMP15O95972 392 aa17.86■□□□□ 0.45
CRAT-201ENST00000318080 PLEKP08567 350 aaPredicted RBP17.86■□□□□ 0.45
CRAT-201ENST00000318080 TUBB4BP68371 445 aa17.86■□□□□ 0.45
CRAT-201ENST00000318080 APBA1Q02410 837 aa17.86■□□□□ 0.45
CRAT-201ENST00000318080 TRIM14Q14142 442 aa17.86■□□□□ 0.45
CRAT-201ENST00000318080 KIAA1328Q86T90 577 aa17.86■□□□□ 0.45
CRAT-201ENST00000318080 CTCFLQ8NI51 663 aaPredicted RBP17.86■□□□□ 0.45
CRAT-201ENST00000318080 TMEM60Q9H2L4 133 aa17.86■□□□□ 0.45
CRAT-201ENST00000318080 MYH3P11055 1940 aa17.86■□□□□ 0.45
CRAT-201ENST00000318080 CYP2D6P10635 497 aa17.86■□□□□ 0.45
CRAT-201ENST00000318080 MSL1Q68DK7 614 aa17.86■□□□□ 0.45
CRAT-201ENST00000318080 COL23A1Q86Y22 540 aaPredicted RBP17.86■□□□□ 0.45
CRAT-201ENST00000318080 LRRC1Q9BTT6 524 aa17.86■□□□□ 0.45
CRAT-201ENST00000318080 PDGFDQ9GZP0 370 aaPredicted RBP17.86■□□□□ 0.45
CRAT-201ENST00000318080 CAPN11Q9UMQ6 739 aa17.86■□□□□ 0.45
CRAT-201ENST00000318080 H7C1D1 291 aa17.85■□□□□ 0.45
CRAT-201ENST00000318080 SCG2P13521 617 aa17.85■□□□□ 0.45
CRAT-201ENST00000318080 EGFL6Q8IUX8 553 aa17.85■□□□□ 0.45
CRAT-201ENST00000318080 ANKRD18AQ8IVF6 992 aa17.85■□□□□ 0.45
CRAT-201ENST00000318080 AKT1S1Q96B36 256 aa17.85■□□□□ 0.45
CRAT-201ENST00000318080 TRIM47Q96LD4 638 aa17.85■□□□□ 0.45
CRAT-201ENST00000318080 DOCK2Q92608 1830 aa17.85■□□□□ 0.45
CRAT-201ENST00000318080 H0YHG0 523 aa17.85■□□□□ 0.45
CRAT-201ENST00000318080 ZNF263O14978 683 aa17.85■□□□□ 0.45
CRAT-201ENST00000318080 KLRC4O43908 158 aa17.85■□□□□ 0.45
CRAT-201ENST00000318080 SHOX2O60902 331 aaPredicted RBP17.85■□□□□ 0.45
CRAT-201ENST00000318080 TTMPQ5BVD1 217 aa17.85■□□□□ 0.45
CRAT-201ENST00000318080 TYW1BQ6NUM6 668 aa17.85■□□□□ 0.45
CRAT-201ENST00000318080 IQCA1Q86XH1 822 aa17.85■□□□□ 0.45
CRAT-201ENST00000318080 CENPHQ9H3R5 247 aa17.85■□□□□ 0.45
CRAT-201ENST00000318080 NHEJ1Q9H9Q4 299 aaPredicted RBP17.85■□□□□ 0.45
CRAT-201ENST00000318080 BAZ2AQ9UIF9 1905 aaKnown RBP17.85■□□□□ 0.45
CRAT-201ENST00000318080 SWT1Q5T5J6 900 aaKnown RBP17.85■□□□□ 0.45
CRAT-201ENST00000318080 VIPAS39Q9H9C1 493 aa17.85■□□□□ 0.45
CRAT-201ENST00000318080 SUFUQ9UMX1 484 aa17.85■□□□□ 0.45
CRAT-201ENST00000318080 SCP2P22307 547 aa17.84■□□□□ 0.45
CRAT-201ENST00000318080 DNA2P51530 1060 aa17.84■□□□□ 0.45
CRAT-201ENST00000318080 GSCP56915 257 aaPredicted RBP17.84■□□□□ 0.45
CRAT-201ENST00000318080 PPP2R5BQ15173 497 aa17.84■□□□□ 0.45
CRAT-201ENST00000318080 RASSF8Q8NHQ8 419 aa17.84■□□□□ 0.45
CRAT-201ENST00000318080 HPS3Q969F9 1004 aa17.84■□□□□ 0.45
CRAT-201ENST00000318080 DUSP9Q99956 384 aaKnown RBP17.84■□□□□ 0.45
CRAT-201ENST00000318080 RBM28Q9NW13 759 aaKnown RBP17.84■□□□□ 0.45
CRAT-201ENST00000318080 COL1A1P02452 1464 aaPredicted RBP17.84■□□□□ 0.45
CRAT-201ENST00000318080 EIF3HO15372 352 aaKnown RBP eCLIP17.84■□□□□ 0.45
CRAT-201ENST00000318080 KRT14P02533 472 aa17.84■□□□□ 0.45
CRAT-201ENST00000318080 ACTN3Q08043 901 aaPredicted RBP17.84■□□□□ 0.45
CRAT-201ENST00000318080 CEP89Q96ST8 783 aa17.84■□□□□ 0.45
CRAT-201ENST00000318080 TTYH3Q9C0H2 523 aa17.84■□□□□ 0.45
CRAT-201ENST00000318080 DISC1Q9NRI5 854 aa17.84■□□□□ 0.45
CRAT-201ENST00000318080 NDUFAB1O14561 156 aa17.83■□□□□ 0.45
CRAT-201ENST00000318080 IDEP14735 1019 aa17.83■□□□□ 0.45
CRAT-201ENST00000318080 TRIM21P19474 475 aaKnown RBP17.83■□□□□ 0.45
CRAT-201ENST00000318080 MTMR7Q9Y216 660 aa17.83■□□□□ 0.45
CRAT-201ENST00000318080 PDS5AQ29RF7 1337 aaKnown RBP17.83■□□□□ 0.44
CRAT-201ENST00000318080 SEC24CP53992 1094 aa17.83■□□□□ 0.44
CRAT-201ENST00000318080 GUCY1A3Q02108 690 aa17.83■□□□□ 0.44
CRAT-201ENST00000318080 DDR1Q08345 913 aa17.83■□□□□ 0.44
CRAT-201ENST00000318080 TTI2Q6NXR4 508 aa17.83■□□□□ 0.44
CRAT-201ENST00000318080 CAMKK2Q96RR4 588 aa17.83■□□□□ 0.44
CRAT-201ENST00000318080 TUBGCP2Q9BSJ2 902 aa17.83■□□□□ 0.44
CRAT-201ENST00000318080 RMND1Q9NWS8 449 aa17.83■□□□□ 0.44
CRAT-201ENST00000318080 LRWD1Q9UFC0 647 aa17.83■□□□□ 0.44
CRAT-201ENST00000318080 SHTN1A0MZ66 631 aa17.82■□□□□ 0.44
CRAT-201ENST00000318080 SSBP05455 408 aaKnown RBP eCLIP17.82■□□□□ 0.44
CRAT-201ENST00000318080 ERCC3P19447 782 aa17.82■□□□□ 0.44
CRAT-201ENST00000318080 PPFIA1Q13136 1202 aa17.82■□□□□ 0.44
CRAT-201ENST00000318080 MEA1Q16626 185 aa17.82■□□□□ 0.44
CRAT-201ENST00000318080 PFKFB3Q16875 520 aaPredicted RBP17.82■□□□□ 0.44
CRAT-201ENST00000318080 RNF187Q5TA31 235 aaPredicted RBP17.82■□□□□ 0.44
CRAT-201ENST00000318080 KIRREL3Q8IZU9 778 aa17.82■□□□□ 0.44
CRAT-201ENST00000318080 STAG2Q8N3U4 1231 aa17.82■□□□□ 0.44
CRAT-201ENST00000318080 MLXIPQ9HAP2 919 aa17.82■□□□□ 0.44
CRAT-201ENST00000318080 TUBBP07437 444 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms