RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 TACO1Q9BSH4 297 aaKnown RBP10.52□□□□□ -0.73
CAPN3-201ENST00000318023 INCENPQ9NQS7 918 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 CPSF2Q9P2I0 782 aaKnown RBP10.52□□□□□ -0.73
CAPN3-201ENST00000318023 USP17L12C9JPN9 530 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 USP17L21D6R901 530 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 M0R2C6 588 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 ZNF202O95125 648 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 ADD2P35612 726 aa10.52□□□□□ -0.73
CAPN3-201ENST00000318023 ZSCAN31Q96LW9 406 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-201ENST00000318023 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.52□□□□□ -0.73
CAPN3-201ENST00000318023 SSC5DA1L4H1 1573 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 ENO4A6NNW6 628 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 RTN2O75298 545 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 FNTAP49354 379 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 HAND2P61296 217 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 ADCY2Q08462 1091 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 PSMD2Q13200 908 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 PICK1Q9NRD5 415 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 A0A1B0GUL6 1792 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 FAM155AB1AL88 458 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-201ENST00000318023 CTAGE5O15320 804 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 PPFIA3O75145 1194 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 PDHBP11177 359 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 JAG1P78504 1218 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 GRIK3Q13003 919 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 SPP2Q13103 211 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 DCAF15Q66K64 600 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 GADL1Q6ZQY3 521 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 OTUD6BQ8N6M0 293 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 FSIP1Q8NA03 581 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 KBTBD3Q8NAB2 608 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 PIK3R5Q8WYR1 880 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 ZNF341Q9BYN7 854 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 CRNKL1Q9BZJ0 848 aaKnown RBP10.51□□□□□ -0.73
CAPN3-201ENST00000318023 POLD4Q9HCU8 107 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 SPATS2LQ9NUQ6 558 aaKnown RBP10.51□□□□□ -0.73
CAPN3-201ENST00000318023 CCL15-CCL14A0A0B4J2E2 113 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 GPAA1O43292 621 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 SERPINC1P01008 464 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 CCL15Q16663 113 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 CEP85LQ5SZL2 805 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 SPRYD7Q5W111 196 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 FAM83AQ86UY5 434 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 CEP112Q8N8E3 955 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 CCDC26Q8TAB7 109 aa10.51□□□□□ -0.73
CAPN3-201ENST00000318023 BAG1Q99933 345 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-201ENST00000318023 RIOK1Q9BRS2 568 aaKnown RBP10.51□□□□□ -0.73
CAPN3-201ENST00000318023 DDX20Q9UHI6 824 aaKnown RBP10.51□□□□□ -0.73
CAPN3-201ENST00000318023 KIAA0754O94854 1291 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 UBASH3AP57075 661 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 MTF1Q14872 753 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 NOA1Q8NC60 698 aaKnown RBP10.5□□□□□ -0.73
CAPN3-201ENST00000318023 MSANTD4Q8NCY6 345 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.5□□□□□ -0.73
CAPN3-201ENST00000318023 BRF1Q92994 677 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 SCLT1Q96NL6 688 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 MRPL44Q9H9J2 332 aaKnown RBP10.5□□□□□ -0.73
CAPN3-201ENST00000318023 KLC4Q9NSK0 619 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 A0A1B0GUA9 196 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 H3BQV1 296 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 RNF113AO15541 343 aaKnown RBP10.5□□□□□ -0.73
CAPN3-201ENST00000318023 SLC10A3P09131 477 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 GGCXP38435 758 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 ADKP55263 362 aaKnown RBP10.5□□□□□ -0.73
CAPN3-201ENST00000318023 GNGT1P63211 74 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 AKAP17AQ02040 695 aaKnown RBP10.5□□□□□ -0.73
CAPN3-201ENST00000318023 RRP12Q5JTH9 1297 aaKnown RBP10.5□□□□□ -0.73
CAPN3-201ENST00000318023 IFFO2Q5TF58 517 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 TMEM139Q8IV31 216 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 GSPT2Q8IYD1 628 aaKnown RBP10.5□□□□□ -0.73
CAPN3-201ENST00000318023 ARMC2Q8NEN0 867 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 WNK4Q96J92 1243 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 ZNF512BQ96KM6 892 aaPredicted RBP10.5□□□□□ -0.73
CAPN3-201ENST00000318023 NUCKS1Q9H1E3 243 aaKnown RBP10.5□□□□□ -0.73
CAPN3-201ENST00000318023 TAOK2Q9UL54 1235 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 SNCAIPQ9Y6H5 919 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 RPS6KL1Q9Y6S9 549 aa10.5□□□□□ -0.73
CAPN3-201ENST00000318023 A0A0D9SFI3 127 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 ANKRD33BA6NCL7 494 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 IGF2BP3O00425 579 aaKnown RBP eCLIP10.49□□□□□ -0.73
CAPN3-201ENST00000318023 ARHGAP6O43182 974 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 GH2P01242 217 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 HLA-DOAP06340 250 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 TOP1P11387 765 aaKnown RBP10.49□□□□□ -0.73
CAPN3-201ENST00000318023 ME1P48163 572 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 MRPL12P52815 198 aaKnown RBP10.49□□□□□ -0.73
CAPN3-201ENST00000318023 FAM76AQ8TAV0 307 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 MICAL1Q8TDZ2 1067 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 FAM163AQ96GL9 167 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-201ENST00000318023 IDI2Q9BXS1 227 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 FANCLQ9NW38 375 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 A0A1B0GVL5 298 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 TCRBV5S4A2TA0A5A2 114 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 TTC36A6NLP5 189 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 PLCG2P16885 1265 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 RESTQ13127 1097 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 LDLRAD1Q5T700 205 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 SPDL1Q96EA4 605 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 SH3GL3Q99963 347 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 MRIQ9BWK5 157 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms