RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 KDM4FA0A1W2PPD8 638 aa18.13■□□□□ 0.49
CACFD1-202ENST00000316948 ESYT3A0FGR9 886 aa18.13■□□□□ 0.49
CACFD1-202ENST00000316948 MAP2K2P36507 400 aa18.13■□□□□ 0.49
CACFD1-202ENST00000316948 USP8P40818 1118 aa18.13■□□□□ 0.49
CACFD1-202ENST00000316948 GUCY1A3Q02108 690 aa18.13■□□□□ 0.49
CACFD1-202ENST00000316948 C8orf74Q6P047 294 aa18.13■□□□□ 0.49
CACFD1-202ENST00000316948 IFT81Q8WYA0 676 aa18.13■□□□□ 0.49
CACFD1-202ENST00000316948 NTSR2O95665 410 aa18.12■□□□□ 0.49
CACFD1-202ENST00000316948 LONP1P36776 959 aaKnown RBP18.12■□□□□ 0.49
CACFD1-202ENST00000316948 CRKLP46109 303 aaKnown RBP18.12■□□□□ 0.49
CACFD1-202ENST00000316948 APBA1Q02410 837 aa18.12■□□□□ 0.49
CACFD1-202ENST00000316948 ALS2CLQ60I27 953 aa18.12■□□□□ 0.49
CACFD1-202ENST00000316948 B4GALNT4Q76KP1 1039 aa18.12■□□□□ 0.49
CACFD1-202ENST00000316948 MS4A14Q96JA4 679 aa18.12■□□□□ 0.49
CACFD1-202ENST00000316948 CCDC43Q96MW1 224 aaKnown RBP18.12■□□□□ 0.49
CACFD1-202ENST00000316948 SH2D4AQ9H788 454 aa18.12■□□□□ 0.49
CACFD1-202ENST00000316948 KLRC4O43908 158 aa18.12■□□□□ 0.49
CACFD1-202ENST00000316948 ZPR1O75312 459 aa18.12■□□□□ 0.49
CACFD1-202ENST00000316948 CAMTA2O94983 1202 aa18.12■□□□□ 0.49
CACFD1-202ENST00000316948 RNF187Q5TA31 235 aaPredicted RBP18.12■□□□□ 0.49
CACFD1-202ENST00000316948 ANKRD40Q6AI12 368 aa18.12■□□□□ 0.49
CACFD1-202ENST00000316948 EMBQ6PCB8 327 aa18.12■□□□□ 0.49
CACFD1-202ENST00000316948 RNPC3Q96LT9 517 aaKnown RBP18.12■□□□□ 0.49
CACFD1-202ENST00000316948 FAM207AQ9NSI2 230 aaPredicted RBP18.12■□□□□ 0.49
CACFD1-202ENST00000316948 RBM12Q9NTZ6 932 aaKnown RBP18.12■□□□□ 0.49
CACFD1-202ENST00000316948 SCG2P13521 617 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 UBA7P41226 1012 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 PAFAH1B1P43034 410 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 NAP1L1P55209 391 aaKnown RBP18.11■□□□□ 0.49
CACFD1-202ENST00000316948 SKOR1P84550 965 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 CCDC178Q5BJE1 867 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 CNPY4Q8N129 248 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 JPH2Q9BR39 696 aaPredicted RBP18.11■□□□□ 0.49
CACFD1-202ENST00000316948 CXorf56Q9H5V9 222 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 CCDC87Q9NVE4 849 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 ZNF804BA4D1E1 1349 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 TAF1P21675 1872 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 ZSCAN5CA6NGD5 496 aaPredicted RBP18.11■□□□□ 0.49
CACFD1-202ENST00000316948 AKR1B10O60218 316 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 CALM1P0DP23 149 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 CALM2P0DP24 149 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 CALM3P0DP25 149 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 ERCC3P19447 782 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 ATP6V1AP38606 617 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 EIF4A3P38919 411 aaKnown RBP18.11■□□□□ 0.49
CACFD1-202ENST00000316948 RETREG2Q8NC44 543 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 ARHGAP20Q9P2F6 1191 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 NFU1Q9UMS0 254 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 HYOU1Q9Y4L1 999 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 CACNA1SQ13698 1873 aa18.11■□□□□ 0.49
CACFD1-202ENST00000316948 MYH13Q9UKX3 1938 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 DDAH1O94760 285 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 FAM153BP0C7A2 387 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 EPB41P11171 864 aaKnown RBP18.1■□□□□ 0.49
CACFD1-202ENST00000316948 TRAPPC10P48553 1259 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 GUCY2FP51841 1108 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 KIF11P52732 1056 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 SETQ01105 290 aaPredicted RBP18.1■□□□□ 0.49
CACFD1-202ENST00000316948 FAM153CQ494X1 144 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 DTHD1Q6ZMT9 781 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 C3orf67Q6ZVT6 689 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 PRPF38AQ8NAV1 312 aaKnown RBP18.1■□□□□ 0.49
CACFD1-202ENST00000316948 GIMAP8Q8ND71 665 aaPredicted RBP18.1■□□□□ 0.49
CACFD1-202ENST00000316948 GPKOWQ92917 476 aaPredicted RBP eCLIP18.1■□□□□ 0.49
CACFD1-202ENST00000316948 ALS2CR12Q96Q35 445 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 BRIP1Q9BX63 1249 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 FAM153AQ9UHL3 310 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 MEFVO15553 781 aaPredicted RBP18.1■□□□□ 0.49
CACFD1-202ENST00000316948 BUB1O43683 1085 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 CYP2D6P10635 497 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 CARSP49589 748 aaKnown RBP18.1■□□□□ 0.49
CACFD1-202ENST00000316948 CFAP58Q5T655 872 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 C4orf32Q8N8J7 132 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 ACSBG1Q96GR2 724 aa18.1■□□□□ 0.49
CACFD1-202ENST00000316948 EPHB6O15197 1021 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 TCP1P17987 556 aaKnown RBP18.09■□□□□ 0.49
CACFD1-202ENST00000316948 SEC24CP53992 1094 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 PARP10Q53GL7 1025 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 P2RX5Q93086 422 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 HPS3Q969F9 1004 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 CABS1Q96KC9 395 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 FAM205AQ6ZU69 1335 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 RHOBTB3O94955 611 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 GLI1P08151 1106 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 LSP1P33241 339 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 GSCP56915 257 aaPredicted RBP18.09■□□□□ 0.49
CACFD1-202ENST00000316948 PDE4DQ08499 809 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 KCNB1Q14721 858 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 MIIPQ5JXC2 388 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 ARL6IP4Q66PJ3 421 aaKnown RBP18.09■□□□□ 0.49
CACFD1-202ENST00000316948 TMEM60Q9H2L4 133 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 MMRN2Q9H8L6 949 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 SALL4Q9UJQ4 1053 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 DISP2A7MBM2 1401 aa18.09■□□□□ 0.49
CACFD1-202ENST00000316948 FCER1AP12319 257 aa18.08■□□□□ 0.49
CACFD1-202ENST00000316948 FNTAP49354 379 aa18.08■□□□□ 0.49
CACFD1-202ENST00000316948 STK4Q13043 487 aa18.08■□□□□ 0.49
CACFD1-202ENST00000316948 LRRC15Q8TF66 581 aa18.08■□□□□ 0.49
CACFD1-202ENST00000316948 EPB41L5Q9HCM4 733 aa18.08■□□□□ 0.49
CACFD1-202ENST00000316948 ZNF233A6NK53 670 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms