RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 MCM7P33993 719 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 CDAN1Q8IWY9 1227 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 OGFOD1Q8N543 542 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 AOPEPQ8N6M6 819 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 GIMAP8Q8ND71 665 aaPredicted RBP8.12□□□□□ -1.11
NPHP1-201ENST00000316534 REPS2Q8NFH8 660 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 LPAR1Q92633 364 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 SMARCE1Q969G3 411 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 COA7Q96BR5 231 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 AMNQ9BXJ7 453 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 ARHGEF10LQ9HCE6 1279 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 GOPCQ9HD26 462 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 RWDD2AQ9UIY3 292 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 STK24Q9Y6E0 443 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 VWA3AA6NCI4 1184 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 SMC2O95347 1197 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 KCTD1Q719H9 257 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 POTEDQ86YR6 584 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 TMEM174Q8WUU8 243 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 TMEM39BQ9GZU3 492 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 SH2D4AQ9H788 454 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 TMOD2Q9NZR1 351 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 ZSWIM8A7E2V4 1837 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 A0A1B0GTH6 734 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 FAM196BA6NMK8 535 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 ATP2A1O14983 1001 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 TNNI2P48788 182 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 SPECC1Q5M775 1068 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 NIPA1Q7RTP0 329 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 GPC2Q8N158 579 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 GPCPD1Q9NPB8 672 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 KIAA1217Q5T5P2 1943 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 ABCB11O95342 1321 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 ITIH6Q6UXX5 1313 aa8.12□□□□□ -1.11
NPHP1-201ENST00000316534 SHTN1A0MZ66 631 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 GDF11O95390 407 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 EGFRP00533 1210 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 SLC1A4P43007 532 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 TNFAIP1Q13829 316 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 NR1I3Q14994 352 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 CCDC144BQ3MJ40 725 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 SH3D19Q5HYK7 790 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 RMND1Q9NWS8 449 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 LIMA1Q9UHB6 759 aaKnown RBP8.11□□□□□ -1.11
NPHP1-201ENST00000316534 VAV3Q9UKW4 847 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 POLR2AP24928 1970 aaKnown RBP8.11□□□□□ -1.11
NPHP1-201ENST00000316534 WDR46O15213 610 aaKnown RBP8.11□□□□□ -1.11
NPHP1-201ENST00000316534 ASNSP08243 561 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 FDX1P10109 184 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 CCZ1BP86790 482 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 CCZ1P86791 482 aaPredicted RBP8.11□□□□□ -1.11
NPHP1-201ENST00000316534 SPATA1Q5VX52 437 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 ADSSL1Q8N142 457 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 ERCC4Q92889 916 aaPredicted RBP8.11□□□□□ -1.11
NPHP1-201ENST00000316534 PSTPIP2Q9H939 334 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 BIN2Q9UBW5 565 aaPredicted RBP8.11□□□□□ -1.11
NPHP1-201ENST00000316534 PNMA2Q9UL42 364 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 TCP10L2B9ZVM9 353 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 PPP1R2P41236 205 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 ECE1P42892 770 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 APOBEC3FQ8IUX4 373 aaKnown RBP8.11□□□□□ -1.11
NPHP1-201ENST00000316534 ACER1Q8TDN7 264 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 ANO3Q9BYT9 981 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 PCDHA2Q9Y5H9 948 aa8.11□□□□□ -1.11
NPHP1-201ENST00000316534 ZC3H4Q9UPT8 1303 aaKnown RBP8.11□□□□□ -1.11
NPHP1-201ENST00000316534 PVALEFA0A1B0GWK0 134 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 CCNT1O60563 726 aaKnown RBP8.1□□□□□ -1.11
NPHP1-201ENST00000316534 RPN1P04843 607 aaKnown RBP8.1□□□□□ -1.11
NPHP1-201ENST00000316534 GMPSP49915 693 aaPredicted RBP8.1□□□□□ -1.11
NPHP1-201ENST00000316534 STAT2P52630 851 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 TMEM139Q8IV31 216 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 VSTM4Q8IW00 320 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 NLGN2Q8NFZ4 835 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 CLEC4DQ8WXI8 215 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 GPRC5DQ9NZD1 345 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 ZNF219Q9P2Y4 722 aaPredicted RBP8.1□□□□□ -1.11
NPHP1-201ENST00000316534 RABGAP1Q9Y3P9 1069 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 MYPNQ86TC9 1320 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 A0A087WWV3 80 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 TDP2O95551 362 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 BCRP11274 1271 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 RBM5P52756 815 aaKnown RBP eCLIP8.1□□□□□ -1.11
NPHP1-201ENST00000316534 OAZ1P54368 228 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 FBXO11Q86XK2 927 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 GRAMD1CQ8IYS0 662 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 KCNN1Q92952 543 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 DHX58Q96C10 678 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 L3MBTL3Q96JM7 780 aaPredicted RBP8.1□□□□□ -1.11
NPHP1-201ENST00000316534 TRIM9Q9C026 710 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 DOCK5Q9H7D0 1870 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 ICAM1P05362 532 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 SLC16A2P36021 539 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 EIF6P56537 245 aaKnown RBP8.1□□□□□ -1.11
NPHP1-201ENST00000316534 FANCCQ00597 558 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 RASSF7Q02833 373 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 CABP7Q86V35 215 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 LRRC8AQ8IWT6 810 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 SLC5A5Q92911 643 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 CCDC34Q96HJ3 373 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 FAM20AQ96MK3 541 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms