RNA–Protein interactions for RNA: ENST00000315732.2

LSM10-201, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM10, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-201ENST00000315732 RNF207Q6ZRF8 634 aa17.25■□□□□ 0.35
LSM10-201ENST00000315732 MPHOSPH6Q99547 160 aaKnown RBP17.25■□□□□ 0.35
LSM10-201ENST00000315732 CDX2Q99626 313 aaPredicted RBP17.25■□□□□ 0.35
LSM10-201ENST00000315732 ZKSCAN3Q9BRR0 538 aa17.25■□□□□ 0.35
LSM10-201ENST00000315732 DSCC1Q9BVC3 393 aa17.25■□□□□ 0.35
LSM10-201ENST00000315732 CTNNA3Q9UI47 895 aa17.25■□□□□ 0.35
LSM10-201ENST00000315732 NEDD4P46934 1319 aa17.24■□□□□ 0.35
LSM10-201ENST00000315732 KDM4AO75164 1064 aa17.24■□□□□ 0.35
LSM10-201ENST00000315732 CALML3P27482 149 aa17.24■□□□□ 0.35
LSM10-201ENST00000315732 IMMTQ16891 758 aaKnown RBP17.24■□□□□ 0.35
LSM10-201ENST00000315732 RGS22Q8NE09 1264 aa17.24■□□□□ 0.35
LSM10-201ENST00000315732 ANKS1AQ92625 1134 aa17.24■□□□□ 0.35
LSM10-201ENST00000315732 WDR11Q9BZH6 1224 aa17.24■□□□□ 0.35
LSM10-201ENST00000315732 TMEM265A0A087WTH1 108 aa17.23■□□□□ 0.35
LSM10-201ENST00000315732 RBM47A0AV96 593 aaKnown RBP17.23■□□□□ 0.35
LSM10-201ENST00000315732 B4DLN1 442 aa17.23■□□□□ 0.35
LSM10-201ENST00000315732 GOLGA8HP0CJ92 632 aa17.23■□□□□ 0.35
LSM10-201ENST00000315732 MRPL12P52815 198 aaKnown RBP17.23■□□□□ 0.35
LSM10-201ENST00000315732 RPS6P62753 249 aaKnown RBP17.23■□□□□ 0.35
LSM10-201ENST00000315732 TMEM63BQ5T3F8 832 aa17.23■□□□□ 0.35
LSM10-201ENST00000315732 PNMA1Q8ND90 353 aa17.23■□□□□ 0.35
LSM10-201ENST00000315732 DNERQ8NFT8 737 aa17.23■□□□□ 0.35
LSM10-201ENST00000315732 ZSCAN10Q96SZ4 725 aaPredicted RBP17.23■□□□□ 0.35
LSM10-201ENST00000315732 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.23■□□□□ 0.35
LSM10-201ENST00000315732 UBA5Q9GZZ9 404 aa17.23■□□□□ 0.35
LSM10-201ENST00000315732 MAF1Q9H063 256 aa17.23■□□□□ 0.35
LSM10-201ENST00000315732 TTYH1Q9H313 450 aaPredicted RBP17.23■□□□□ 0.35
LSM10-201ENST00000315732 KAT14Q9H8E8 782 aa17.23■□□□□ 0.35
LSM10-201ENST00000315732 ZSWIM5Q9P217 1185 aa17.23■□□□□ 0.35
LSM10-201ENST00000315732 UNC80Q8N2C7 3258 aa17.23■□□□□ 0.35
LSM10-201ENST00000315732 GRIN2DO15399 1336 aa17.22■□□□□ 0.35
LSM10-201ENST00000315732 CSF2RAP15509 400 aa17.22■□□□□ 0.35
LSM10-201ENST00000315732 PTGS1P23219 599 aa17.22■□□□□ 0.35
LSM10-201ENST00000315732 PDE4DQ08499 809 aa17.22■□□□□ 0.35
LSM10-201ENST00000315732 TMEM240Q5SV17 173 aa17.22■□□□□ 0.35
LSM10-201ENST00000315732 SLC30A10Q6XR72 485 aa17.22■□□□□ 0.35
LSM10-201ENST00000315732 C16orf59Q7L2K0 433 aa17.22■□□□□ 0.35
LSM10-201ENST00000315732 PPP1R12CQ9BZL4 782 aa17.22■□□□□ 0.35
LSM10-201ENST00000315732 KRT23Q9C075 422 aa17.22■□□□□ 0.35
LSM10-201ENST00000315732 B4E1Z4 1266 aa17.21■□□□□ 0.35
LSM10-201ENST00000315732 EDNRBP24530 442 aa17.21■□□□□ 0.35
LSM10-201ENST00000315732 CYP2C18P33260 490 aa17.21■□□□□ 0.35
LSM10-201ENST00000315732 CPT1AP50416 773 aa17.21■□□□□ 0.35
LSM10-201ENST00000315732 HIPK3Q9H422 1215 aa17.21■□□□□ 0.35
LSM10-201ENST00000315732 CNNM2Q9H8M5 875 aa17.21■□□□□ 0.35
LSM10-201ENST00000315732 POLR3EQ9NVU0 708 aa17.21■□□□□ 0.35
LSM10-201ENST00000315732 MCM3APO60318 1980 aa17.2■□□□□ 0.34
LSM10-201ENST00000315732 CDH23Q9H251 3354 aa17.2■□□□□ 0.34
LSM10-201ENST00000315732 NKRFO15226 690 aaKnown RBP eCLIP17.2■□□□□ 0.34
LSM10-201ENST00000315732 PSMC6P62333 389 aa17.2■□□□□ 0.34
LSM10-201ENST00000315732 USH1GQ495M9 461 aa17.2■□□□□ 0.34
LSM10-201ENST00000315732 ASPRV1Q53RT3 343 aa17.2■□□□□ 0.34
LSM10-201ENST00000315732 BRDTQ58F21 947 aaPredicted RBP17.2■□□□□ 0.34
LSM10-201ENST00000315732 PSRC1Q6PGN9 363 aaPredicted RBP17.2■□□□□ 0.34
LSM10-201ENST00000315732 ZNF365Q70YC5 407 aa17.2■□□□□ 0.34
LSM10-201ENST00000315732 ADGRF4Q8IZF3 695 aa17.2■□□□□ 0.34
LSM10-201ENST00000315732 ENAHQ8N8S7 591 aaPredicted RBP17.2■□□□□ 0.34
LSM10-201ENST00000315732 TRPV6Q9H1D0 765 aa17.2■□□□□ 0.34
LSM10-201ENST00000315732 IL23AQ9NPF7 189 aa17.2■□□□□ 0.34
LSM10-201ENST00000315732 GPHNQ9NQX3 736 aaPredicted RBP17.2■□□□□ 0.34
LSM10-201ENST00000315732 B4GALT4O60513 344 aa17.19■□□□□ 0.34
LSM10-201ENST00000315732 ACRP10323 421 aa17.19■□□□□ 0.34
LSM10-201ENST00000315732 DNAJB2P25686 324 aa17.19■□□□□ 0.34
LSM10-201ENST00000315732 CDC37Q16543 378 aaPredicted RBP17.19■□□□□ 0.34
LSM10-201ENST00000315732 RASIP1Q5U651 963 aa17.19■□□□□ 0.34
LSM10-201ENST00000315732 OR6J1Q8NGC5 347 aa17.19■□□□□ 0.34
LSM10-201ENST00000315732 SCFD2Q8WU76 684 aa17.19■□□□□ 0.34
LSM10-201ENST00000315732 UBAC1Q9BSL1 405 aa17.19■□□□□ 0.34
LSM10-201ENST00000315732 CPVLQ9H3G5 476 aa17.19■□□□□ 0.34
LSM10-201ENST00000315732 SUPT16HQ9Y5B9 1047 aaKnown RBP17.19■□□□□ 0.34
LSM10-201ENST00000315732 TNKSO95271 1327 aa17.19■□□□□ 0.34
LSM10-201ENST00000315732 ABCB11O95342 1321 aa17.19■□□□□ 0.34
LSM10-201ENST00000315732 KPNA6O60684 536 aa17.18■□□□□ 0.34
LSM10-201ENST00000315732 FGBP02675 491 aa17.18■□□□□ 0.34
LSM10-201ENST00000315732 PARP1P09874 1014 aaKnown RBP17.18■□□□□ 0.34
LSM10-201ENST00000315732 SUPT20HL2P0C7V6 817 aa17.18■□□□□ 0.34
LSM10-201ENST00000315732 PURAQ00577 322 aaKnown RBP17.18■□□□□ 0.34
LSM10-201ENST00000315732 PPP2R5BQ15173 497 aa17.18■□□□□ 0.34
LSM10-201ENST00000315732 MCF2L2Q86YR7 1114 aa17.18■□□□□ 0.34
LSM10-201ENST00000315732 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.18■□□□□ 0.34
LSM10-201ENST00000315732 MYLIPQ8WY64 445 aa17.18■□□□□ 0.34
LSM10-201ENST00000315732 TIFAQ96CG3 184 aa17.18■□□□□ 0.34
LSM10-201ENST00000315732 MTG1Q9BT17 334 aaPredicted RBP17.18■□□□□ 0.34
LSM10-201ENST00000315732 ALDH8A1Q9H2A2 487 aaPredicted RBP17.18■□□□□ 0.34
LSM10-201ENST00000315732 EYSQ5T1H1 3165 aa17.18■□□□□ 0.34
LSM10-201ENST00000315732 RAD50Q92878 1312 aa17.18■□□□□ 0.34
LSM10-201ENST00000315732 MYL3P08590 195 aa17.17■□□□□ 0.34
LSM10-201ENST00000315732 TXNP10599 105 aaKnown RBP17.17■□□□□ 0.34
LSM10-201ENST00000315732 FOSL2P15408 326 aa17.17■□□□□ 0.34
LSM10-201ENST00000315732 IFIT1BQ5T764 474 aaKnown RBP17.17■□□□□ 0.34
LSM10-201ENST00000315732 RPUSD2Q8IZ73 545 aaKnown RBP17.17■□□□□ 0.34
LSM10-201ENST00000315732 MAFAQ8NHW3 353 aaPredicted RBP17.17■□□□□ 0.34
LSM10-201ENST00000315732 NSUN6Q8TEA1 469 aaKnown RBP17.17■□□□□ 0.34
LSM10-201ENST00000315732 HERVK_113Q902F9 699 aa17.17■□□□□ 0.34
LSM10-201ENST00000315732 NOC4LQ9BVI4 516 aaKnown RBP17.17■□□□□ 0.34
LSM10-201ENST00000315732 MTIF3Q9H2K0 278 aaKnown RBP17.17■□□□□ 0.34
LSM10-201ENST00000315732 VAT1LQ9HCJ6 419 aa17.17■□□□□ 0.34
LSM10-201ENST00000315732 MRPL11Q9Y3B7 192 aaKnown RBP17.17■□□□□ 0.34
LSM10-201ENST00000315732 A6NJR5 290 aa17.16■□□□□ 0.34
LSM10-201ENST00000315732 DHX16O60231 1041 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms