RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 FBXO11Q86XK2 927 aa14.8□□□□□ -0.04
CKS2-201ENST00000314355 FBXO16Q8IX29 292 aaPredicted RBP14.8□□□□□ -0.04
CKS2-201ENST00000314355 ADGRF4Q8IZF3 695 aa14.8□□□□□ -0.04
CKS2-201ENST00000314355 TMEM199Q8N511 208 aa14.8□□□□□ -0.04
CKS2-201ENST00000314355 NCOA7Q8NI08 942 aa14.8□□□□□ -0.04
CKS2-201ENST00000314355 WDR11Q9BZH6 1224 aa14.8□□□□□ -0.04
CKS2-201ENST00000314355 POLR3EQ9NVU0 708 aa14.8□□□□□ -0.04
CKS2-201ENST00000314355 GNEQ9Y223 722 aaKnown RBP14.8□□□□□ -0.04
CKS2-201ENST00000314355 MYADML2A6NDP7 307 aa14.79□□□□□ -0.04
CKS2-201ENST00000314355 IFIT3O14879 490 aaKnown RBP14.79□□□□□ -0.04
CKS2-201ENST00000314355 TIMP1P01033 207 aa14.79□□□□□ -0.04
CKS2-201ENST00000314355 CHMLP26374 656 aa14.79□□□□□ -0.04
CKS2-201ENST00000314355 PDE4AP27815 886 aa14.79□□□□□ -0.04
CKS2-201ENST00000314355 FAAP100Q0VG06 881 aa14.79□□□□□ -0.04
CKS2-201ENST00000314355 PPIGQ13427 754 aaKnown RBP eCLIP14.79□□□□□ -0.04
CKS2-201ENST00000314355 ITGA7Q13683 1181 aa14.79□□□□□ -0.04
CKS2-201ENST00000314355 DUSP28Q4G0W2 176 aa14.79□□□□□ -0.04
CKS2-201ENST00000314355 ZNF697Q5TEC3 545 aa14.79□□□□□ -0.04
CKS2-201ENST00000314355 TAPT1Q6NXT6 567 aa14.79□□□□□ -0.04
CKS2-201ENST00000314355 CXCL17Q6UXB2 119 aa14.79□□□□□ -0.04
CKS2-201ENST00000314355 ENAHQ8N8S7 591 aaPredicted RBP14.79□□□□□ -0.04
CKS2-201ENST00000314355 MORC4Q8TE76 937 aa14.79□□□□□ -0.04
CKS2-201ENST00000314355 SCFD2Q8WU76 684 aa14.79□□□□□ -0.04
CKS2-201ENST00000314355 KATNBL1Q9H079 304 aa14.79□□□□□ -0.04
CKS2-201ENST00000314355 PDGFCQ9NRA1 345 aa14.79□□□□□ -0.04
CKS2-201ENST00000314355 GSPT1P15170 499 aaKnown RBP14.78□□□□□ -0.04
CKS2-201ENST00000314355 CDK7P50613 346 aa14.78□□□□□ -0.04
CKS2-201ENST00000314355 NKX3-2P78367 333 aa14.78□□□□□ -0.04
CKS2-201ENST00000314355 TTLL4Q14679 1199 aa14.78□□□□□ -0.04
CKS2-201ENST00000314355 PPP2R5BQ15173 497 aa14.78□□□□□ -0.04
CKS2-201ENST00000314355 POTEDQ86YR6 584 aa14.78□□□□□ -0.04
CKS2-201ENST00000314355 NSUN6Q8TEA1 469 aaKnown RBP14.78□□□□□ -0.04
CKS2-201ENST00000314355 CLEC4DQ8WXI8 215 aa14.78□□□□□ -0.04
CKS2-201ENST00000314355 RNPC3Q96LT9 517 aaKnown RBP14.78□□□□□ -0.04
CKS2-201ENST00000314355 AMNQ9BXJ7 453 aa14.78□□□□□ -0.04
CKS2-201ENST00000314355 KLRF2D3W0D1 207 aa14.77□□□□□ -0.05
CKS2-201ENST00000314355 KPNA6O60684 536 aa14.77□□□□□ -0.05
CKS2-201ENST00000314355 SUPT20HL2P0C7V6 817 aa14.77□□□□□ -0.05
CKS2-201ENST00000314355 WTAPQ15007 396 aa14.77□□□□□ -0.05
CKS2-201ENST00000314355 STXBP2Q15833 593 aa14.77□□□□□ -0.05
CKS2-201ENST00000314355 ARHGEF16Q5VV41 709 aa14.77□□□□□ -0.05
CKS2-201ENST00000314355 FAM109BQ6ICB4 259 aaPredicted RBP14.77□□□□□ -0.05
CKS2-201ENST00000314355 MFSD5Q6N075 450 aa14.77□□□□□ -0.05
CKS2-201ENST00000314355 SLC30A10Q6XR72 485 aa14.77□□□□□ -0.05
CKS2-201ENST00000314355 SLC17A8Q8NDX2 589 aa14.77□□□□□ -0.05
CKS2-201ENST00000314355 OR6J1Q8NGC5 347 aa14.77□□□□□ -0.05
CKS2-201ENST00000314355 PURBQ96QR8 312 aaKnown RBP14.77□□□□□ -0.05
CKS2-201ENST00000314355 MTIF3Q9H2K0 278 aaKnown RBP14.77□□□□□ -0.05
CKS2-201ENST00000314355 MAP3K20Q9NYL2 800 aaKnown RBP14.77□□□□□ -0.05
CKS2-201ENST00000314355 ADCY6O43306 1168 aa14.76□□□□□ -0.05
CKS2-201ENST00000314355 MYL3P08590 195 aa14.76□□□□□ -0.05
CKS2-201ENST00000314355 TXNP10599 105 aaKnown RBP14.76□□□□□ -0.05
CKS2-201ENST00000314355 QRICH1Q2TAL8 776 aa14.76□□□□□ -0.05
CKS2-201ENST00000314355 CASC1Q6TDU7 716 aa14.76□□□□□ -0.05
CKS2-201ENST00000314355 CATIPQ7Z7H3 387 aa14.76□□□□□ -0.05
CKS2-201ENST00000314355 SAMD3Q8N6K7 520 aa14.76□□□□□ -0.05
CKS2-201ENST00000314355 IWS1Q96ST2 819 aa14.76□□□□□ -0.05
CKS2-201ENST00000314355 CPVLQ9H3G5 476 aa14.76□□□□□ -0.05
CKS2-201ENST00000314355 JMJD4Q9H9V9 463 aa14.76□□□□□ -0.05
CKS2-201ENST00000314355 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.75□□□□□ -0.05
CKS2-201ENST00000314355 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.75□□□□□ -0.05
CKS2-201ENST00000314355 SGSM2O43147 1006 aa14.75□□□□□ -0.05
CKS2-201ENST00000314355 CFBP00751 764 aa14.75□□□□□ -0.05
CKS2-201ENST00000314355 CYP21A2P08686 494 aa14.75□□□□□ -0.05
CKS2-201ENST00000314355 IRX5P78411 483 aaPredicted RBP14.75□□□□□ -0.05
CKS2-201ENST00000314355 SMAD3P84022 425 aaKnown RBP14.75□□□□□ -0.05
CKS2-201ENST00000314355 C9orf50Q5SZB4 431 aa14.75□□□□□ -0.05
CKS2-201ENST00000314355 RPUSD2Q8IZ73 545 aaKnown RBP14.75□□□□□ -0.05
CKS2-201ENST00000314355 TMTC2Q8N394 836 aa14.75□□□□□ -0.05
CKS2-201ENST00000314355 RMDN3Q96TC7 470 aa14.75□□□□□ -0.05
CKS2-201ENST00000314355 PPP1R12CQ9BZL4 782 aa14.75□□□□□ -0.05
CKS2-201ENST00000314355 STXBP5LQ9Y2K9 1186 aa14.75□□□□□ -0.05
CKS2-201ENST00000314355 RBM47A0AV96 593 aaKnown RBP14.74□□□□□ -0.05
CKS2-201ENST00000314355 E7EWF7 191 aa14.74□□□□□ -0.05
CKS2-201ENST00000314355 ZBTB5O15062 677 aa14.74□□□□□ -0.05
CKS2-201ENST00000314355 PTH1RQ03431 593 aa14.74□□□□□ -0.05
CKS2-201ENST00000314355 FAM47CQ5HY64 1035 aa14.74□□□□□ -0.05
CKS2-201ENST00000314355 SEPT14Q6ZU15 432 aa14.74□□□□□ -0.05
CKS2-201ENST00000314355 Q7L0L9 218 aa14.74□□□□□ -0.05
CKS2-201ENST00000314355 CYB5R4Q7L1T6 521 aa14.74□□□□□ -0.05
CKS2-201ENST00000314355 FAM126BQ8IXS8 530 aa14.74□□□□□ -0.05
CKS2-201ENST00000314355 MTG1Q9BT17 334 aaPredicted RBP14.74□□□□□ -0.05
CKS2-201ENST00000314355 MTMR10Q9NXD2 777 aa14.74□□□□□ -0.05
CKS2-201ENST00000314355 NOD1Q9Y239 953 aa14.74□□□□□ -0.05
CKS2-201ENST00000314355 PCDHA1Q9Y5I3 950 aa14.74□□□□□ -0.05
CKS2-201ENST00000314355 ASTN1O14525 1302 aa14.73□□□□□ -0.05
CKS2-201ENST00000314355 MCM3APO60318 1980 aa14.73□□□□□ -0.05
CKS2-201ENST00000314355 CTAGE5O15320 804 aa14.73□□□□□ -0.05
CKS2-201ENST00000314355 ITGB8P26012 769 aa14.73□□□□□ -0.05
CKS2-201ENST00000314355 SEC23AQ15436 765 aa14.73□□□□□ -0.05
CKS2-201ENST00000314355 TMEM67Q5HYA8 995 aa14.73□□□□□ -0.05
CKS2-201ENST00000314355 PSRC1Q6PGN9 363 aaPredicted RBP14.73□□□□□ -0.05
CKS2-201ENST00000314355 NFXL1Q6ZNB6 911 aa14.73□□□□□ -0.05
CKS2-201ENST00000314355 HOMER1Q86YM7 354 aa14.73□□□□□ -0.05
CKS2-201ENST00000314355 CTCFLQ8NI51 663 aaPredicted RBP14.73□□□□□ -0.05
CKS2-201ENST00000314355 SYTL5Q8TDW5 730 aaPredicted RBP14.73□□□□□ -0.05
CKS2-201ENST00000314355 MAP4K1Q92918 833 aa14.73□□□□□ -0.05
CKS2-201ENST00000314355 TAAR1Q96RJ0 339 aa14.73□□□□□ -0.05
CKS2-201ENST00000314355 HIPK3Q9H422 1215 aa14.73□□□□□ -0.05
CKS2-201ENST00000314355 TBX21Q9UL17 535 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms