RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 FAM177A1Q8N128 213 aaPredicted RBP13.97□□□□□ -0.17
RNF4-201ENST00000314289 TMX1Q9H3N1 280 aa13.97□□□□□ -0.17
RNF4-201ENST00000314289 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
RNF4-201ENST00000314289 MARCH6O60337 910 aa13.96□□□□□ -0.17
RNF4-201ENST00000314289 SYCP1Q15431 976 aa13.96□□□□□ -0.17
RNF4-201ENST00000314289 DYMQ7RTS9 669 aa13.96□□□□□ -0.17
RNF4-201ENST00000314289 APTXQ7Z2E3 356 aaKnown RBP13.96□□□□□ -0.17
RNF4-201ENST00000314289 TAB2Q9NYJ8 693 aa13.96□□□□□ -0.17
RNF4-201ENST00000314289 LRWD1Q9UFC0 647 aa13.96□□□□□ -0.17
RNF4-201ENST00000314289 PES1O00541 588 aaKnown RBP13.96□□□□□ -0.17
RNF4-201ENST00000314289 NDUFB10O96000 172 aa13.96□□□□□ -0.17
RNF4-201ENST00000314289 FCER1AP12319 257 aa13.96□□□□□ -0.17
RNF4-201ENST00000314289 KCNA3P22001 575 aa13.96□□□□□ -0.17
RNF4-201ENST00000314289 PAK1Q13153 545 aa13.96□□□□□ -0.17
RNF4-201ENST00000314289 SF3B2Q13435 895 aaKnown RBP13.96□□□□□ -0.17
RNF4-201ENST00000314289 ELF2Q15723 593 aa13.96□□□□□ -0.17
RNF4-201ENST00000314289 ZNF658Q5TYW1 1059 aaPredicted RBP13.96□□□□□ -0.17
RNF4-201ENST00000314289 SPECC1LQ69YQ0 1117 aa13.96□□□□□ -0.17
RNF4-201ENST00000314289 CC2D2BQ6DHV5 1058 aa13.96□□□□□ -0.17
RNF4-201ENST00000314289 TATDN1Q6P1N9 297 aa13.96□□□□□ -0.17
RNF4-201ENST00000314289 CUL5Q93034 780 aa13.96□□□□□ -0.17
RNF4-201ENST00000314289 TMEM39BQ9GZU3 492 aa13.96□□□□□ -0.17
RNF4-201ENST00000314289 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.96□□□□□ -0.17
RNF4-201ENST00000314289 RIC8AQ9NPQ8 531 aa13.96□□□□□ -0.17
RNF4-201ENST00000314289 ERCC3P19447 782 aa13.96□□□□□ -0.18
RNF4-201ENST00000314289 COL4A5P29400 1685 aa13.96□□□□□ -0.18
RNF4-201ENST00000314289 ASIC1P78348 528 aa13.96□□□□□ -0.18
RNF4-201ENST00000314289 NR1I3Q14994 352 aa13.96□□□□□ -0.18
RNF4-201ENST00000314289 ACER1Q8TDN7 264 aa13.96□□□□□ -0.18
RNF4-201ENST00000314289 CCSER1Q9C0I3 900 aa13.96□□□□□ -0.18
RNF4-201ENST00000314289 ESYT2A0FGR8 921 aa13.95□□□□□ -0.18
RNF4-201ENST00000314289 KLRC4O43908 158 aa13.95□□□□□ -0.18
RNF4-201ENST00000314289 PRPHP41219 470 aa13.95□□□□□ -0.18
RNF4-201ENST00000314289 HDLBPQ00341 1268 aaKnown RBP13.95□□□□□ -0.18
RNF4-201ENST00000314289 MCM6Q14566 821 aa13.95□□□□□ -0.18
RNF4-201ENST00000314289 DLGAP5Q15398 846 aa13.95□□□□□ -0.18
RNF4-201ENST00000314289 CCDC93Q567U6 631 aa13.95□□□□□ -0.18
RNF4-201ENST00000314289 RBM26Q5T8P6 1007 aaKnown RBP13.95□□□□□ -0.18
RNF4-201ENST00000314289 PPP1R13BQ96KQ4 1090 aa13.95□□□□□ -0.18
RNF4-201ENST00000314289 P2RX7Q99572 595 aaKnown RBP13.95□□□□□ -0.18
RNF4-201ENST00000314289 KBTBD4Q9NVX7 518 aa13.95□□□□□ -0.18
RNF4-201ENST00000314289 SPDYE2BA6NHP3 402 aa13.95□□□□□ -0.18
RNF4-201ENST00000314289 LAD1O00515 517 aa13.95□□□□□ -0.18
RNF4-201ENST00000314289 SPDYE6P0CI01 402 aa13.95□□□□□ -0.18
RNF4-201ENST00000314289 HOXA13P31271 388 aaPredicted RBP13.95□□□□□ -0.18
RNF4-201ENST00000314289 KIAA1755Q5JYT7 1200 aa13.95□□□□□ -0.18
RNF4-201ENST00000314289 RSBN1LQ6PCB5 846 aaPredicted RBP13.95□□□□□ -0.18
RNF4-201ENST00000314289 TMEM179Q6ZVK1 233 aa13.95□□□□□ -0.18
RNF4-201ENST00000314289 KCNK18Q7Z418 384 aa13.95□□□□□ -0.18
RNF4-201ENST00000314289 OGFOD1Q8N543 542 aa13.95□□□□□ -0.18
RNF4-201ENST00000314289 ZFP91Q96JP5 570 aaPredicted RBP13.95□□□□□ -0.18
RNF4-201ENST00000314289 MTMR9Q96QG7 549 aa13.95□□□□□ -0.18
RNF4-201ENST00000314289 DDX25Q9UHL0 483 aaKnown RBP13.95□□□□□ -0.18
RNF4-201ENST00000314289 MYO3BQ8WXR4 1341 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 A0A1B0GTH6 734 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 STK4Q13043 487 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 MTF1Q14872 753 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 KRT31Q15323 416 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 CDKAL1Q5VV42 579 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 TC2NQ8N9U0 490 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 DESI2Q9BSY9 194 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 MRIQ9BWK5 157 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 MRPL12P52815 198 aaKnown RBP13.94□□□□□ -0.18
RNF4-201ENST00000314289 GABPB1Q06547 395 aaPredicted RBP13.94□□□□□ -0.18
RNF4-201ENST00000314289 PDE4DQ08499 809 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 ECM1Q16610 540 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 SLC30A10Q6XR72 485 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 ZNF397Q8NF99 534 aaPredicted RBP13.94□□□□□ -0.18
RNF4-201ENST00000314289 NYAP2Q9P242 653 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 MYH7BA7E2Y1 1941 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 N4BP3O15049 544 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 FKBP1AP62942 108 aaKnown RBP13.94□□□□□ -0.18
RNF4-201ENST00000314289 RBL2Q08999 1139 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 GRB10Q13322 594 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 FBXO38Q6PIJ6 1188 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 NYAP1Q6ZVC0 841 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 KRT222Q8N1A0 295 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 IGSF22Q8N9C0 903 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 SUPT20HQ8NEM7 779 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 SNX29Q8TEQ0 813 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 HAS1Q92839 578 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 PYM1Q9BRP8 204 aaKnown RBP13.94□□□□□ -0.18
RNF4-201ENST00000314289 TRIM9Q9C026 710 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 SLC39A2Q9NP94 309 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 ST7Q9NRC1 585 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 TMOD2Q9NZR1 351 aa13.94□□□□□ -0.18
RNF4-201ENST00000314289 ZNF70Q9UC06 446 aaPredicted RBP13.94□□□□□ -0.18
RNF4-201ENST00000314289 ADD3Q9UEY8 706 aaKnown RBP13.94□□□□□ -0.18
RNF4-201ENST00000314289 ERICH4A6NGS2 130 aa13.93□□□□□ -0.18
RNF4-201ENST00000314289 NKRFO15226 690 aaKnown RBP eCLIP13.93□□□□□ -0.18
RNF4-201ENST00000314289 SSBP05455 408 aaKnown RBP eCLIP13.93□□□□□ -0.18
RNF4-201ENST00000314289 BAG6P46379 1132 aa13.93□□□□□ -0.18
RNF4-201ENST00000314289 RAD51AP2Q09MP3 1159 aa13.93□□□□□ -0.18
RNF4-201ENST00000314289 NBPF9Q3BBW0 867 aa13.93□□□□□ -0.18
RNF4-201ENST00000314289 SYT10Q6XYQ8 523 aa13.93□□□□□ -0.18
RNF4-201ENST00000314289 CALML4Q96GE6 196 aa13.93□□□□□ -0.18
RNF4-201ENST00000314289 CDK5RAP3Q96JB5 506 aa13.93□□□□□ -0.18
RNF4-201ENST00000314289 PNMA5Q96PV4 448 aa13.93□□□□□ -0.18
RNF4-201ENST00000314289 BAG1Q99933 345 aaPredicted RBP13.93□□□□□ -0.18
RNF4-201ENST00000314289 RMND1Q9NWS8 449 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms