RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 TTYH3Q9C0H2 523 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 CCNL1Q9UK58 526 aaPredicted RBP10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 GUCA1BQ9UMX6 200 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 L1RE1Q9UN81 338 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 B4DLN1 442 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 IL1R1P14778 569 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 TRIM21P19474 475 aaKnown RBP10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 RFC4P35249 363 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 BTDP43251 543 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 FXR2P51116 673 aaKnown RBP eCLIP10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 HERVK_113P62684 666 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 DIXDC1Q155Q3 683 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 LETM2Q2VYF4 491 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 MAP9Q49MG5 647 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 CCDC122Q5T0U0 273 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 WDR59Q6PJI9 974 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 MAPKAPK5Q8IW41 473 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 REXO1Q8N1G1 1221 aaKnown RBP10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 JAKMIP2Q96AA8 810 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 CNOT6LQ96LI5 555 aaKnown RBP10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 RIOX1Q9H6W3 641 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 JAG2Q9Y219 1238 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 PLIN4Q96Q06 1357 aa10.78□□□□□ -0.68
LSMEM1-201ENST00000312849 TARSL2A2RTX5 802 aaKnown RBP10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 HNRNPH3P31942 346 aaKnown RBP10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 KCNQ4P56696 695 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 PSMD2Q13200 908 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 PDIA5Q14554 519 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 SLC4A8Q2Y0W8 1093 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 ASPRV1Q53RT3 343 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 TRAPPC3LQ5T215 181 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 ANKRD40Q6AI12 368 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 IQCEQ6IPM2 695 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 CENPPQ6IPU0 288 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 PPP1R18Q6NYC8 613 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 ARHGAP27Q6ZUM4 889 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 SLC44A5Q8NCS7 719 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 PNKPQ96T60 521 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 PLIN2Q99541 437 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 NOC4LQ9BVI4 516 aaKnown RBP10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 CD209Q9NNX6 404 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 SAP30BPQ9UHR5 308 aaKnown RBP10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 SAR1BQ9Y6B6 198 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 C10orf71Q711Q0 1435 aa10.77□□□□□ -0.69
LSMEM1-201ENST00000312849 SLC26A4O43511 780 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 USP14P54578 494 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 SEPT2Q15019 361 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 UNC13DQ70J99 1090 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 CCDC84Q86UT8 332 aaPredicted RBP10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 CNBD1Q8NA66 436 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 CERKQ8TCT0 537 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 TBCKQ8TEA7 893 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 RPGRQ92834 1020 aaKnown RBP10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 PCMTD1Q96MG8 357 aaPredicted RBP10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 EDEM3Q9BZQ6 932 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 VIPAS39Q9H9C1 493 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 NHEJ1Q9H9Q4 299 aaPredicted RBP10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 ABCB6Q9NP58 842 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 GAKO14976 1311 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 LTBP4Q8N2S1 1624 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 USO1O60763 962 aaKnown RBP10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 ABL1P00519 1130 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 RHOXF2BP0C7M4 288 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 GOLGA8HP0CJ92 632 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 TECP42680 631 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 ADCY7P51828 1080 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 LRRC63Q05C16 580 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 STK4Q13043 487 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 SPA17Q15506 151 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 CALCRLQ16602 461 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 MIIPQ5JXC2 388 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 GUF1Q8N442 669 aaKnown RBP10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 CCDC24Q8N4L8 307 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 RUBCNQ92622 972 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 RBM17Q96I25 401 aaKnown RBP10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 CDK5RAP3Q96JB5 506 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 MTMR9Q96QG7 549 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 PURBQ96QR8 312 aaKnown RBP10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 NAP1L4Q99733 375 aaKnown RBP10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 RHOXF2Q9BQY4 288 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 MMTAG2Q9BU76 263 aaKnown RBP10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 MED4Q9NPJ6 270 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 LRWD1Q9UFC0 647 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 GGA1Q9UJY5 639 aa10.76□□□□□ -0.69
LSMEM1-201ENST00000312849 RASSF10A6NK89 507 aa10.75□□□□□ -0.69
LSMEM1-201ENST00000312849 BBOX1O75936 387 aa10.75□□□□□ -0.69
LSMEM1-201ENST00000312849 VAV2P52735 878 aa10.75□□□□□ -0.69
LSMEM1-201ENST00000312849 VSNL1P62760 191 aa10.75□□□□□ -0.69
LSMEM1-201ENST00000312849 GPSM2P81274 684 aa10.75□□□□□ -0.69
LSMEM1-201ENST00000312849 KIF5AQ12840 1032 aa10.75□□□□□ -0.69
LSMEM1-201ENST00000312849 NFIXQ14938 502 aa10.75□□□□□ -0.69
LSMEM1-201ENST00000312849 GRIK5Q16478 980 aa10.75□□□□□ -0.69
LSMEM1-201ENST00000312849 MAN2A1Q16706 1144 aa10.75□□□□□ -0.69
LSMEM1-201ENST00000312849 VWA3BQ502W6 1294 aa10.75□□□□□ -0.69
LSMEM1-201ENST00000312849 HSP90B2PQ58FF3 399 aa10.75□□□□□ -0.69
LSMEM1-201ENST00000312849 MUM1L1Q5H9M0 696 aa10.75□□□□□ -0.69
LSMEM1-201ENST00000312849 CCDC70Q6NSX1 233 aa10.75□□□□□ -0.69
LSMEM1-201ENST00000312849 USP17L2Q6R6M4 530 aa10.75□□□□□ -0.69
LSMEM1-201ENST00000312849 FNBP4Q8N3X1 1017 aaPredicted RBP10.75□□□□□ -0.69
LSMEM1-201ENST00000312849 FAM71BQ8TC56 605 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms