RNA–Protein interactions for RNA: ENST00000312734.8

CGREF1-202, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CGREF1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-202ENST00000312734 CCAR1Q8IX12 1150 aaKnown RBP31.24■■■□□ 2.59
CGREF1-202ENST00000312734 REXO1Q8N1G1 1221 aaKnown RBP31.24■■■□□ 2.59
CGREF1-202ENST00000312734 GLT8D2Q9H1C3 349 aa31.24■■■□□ 2.59
CGREF1-202ENST00000312734 EFCC1Q9HA90 598 aa31.24■■■□□ 2.59
CGREF1-202ENST00000312734 ECM2O94769 699 aaPredicted RBP31.23■■■□□ 2.59
CGREF1-202ENST00000312734 F13A1P00488 732 aa31.23■■■□□ 2.59
CGREF1-202ENST00000312734 FOXP1Q9H334 677 aaPredicted RBP31.23■■■□□ 2.59
CGREF1-202ENST00000312734 RNF186Q9NXI6 227 aa31.23■■■□□ 2.59
CGREF1-202ENST00000312734 M0R2N6 131 aa31.22■■■□□ 2.59
CGREF1-202ENST00000312734 NOM1Q5C9Z4 860 aaKnown RBP31.22■■■□□ 2.59
CGREF1-202ENST00000312734 FBXO40Q9UH90 709 aa31.22■■■□□ 2.59
CGREF1-202ENST00000312734 U2AF2P26368 475 aaKnown RBP eCLIP31.21■■■□□ 2.59
CGREF1-202ENST00000312734 COPB2P35606 906 aa31.21■■■□□ 2.59
CGREF1-202ENST00000312734 RESTQ13127 1097 aa31.21■■■□□ 2.59
CGREF1-202ENST00000312734 FOXD4L6Q3SYB3 417 aaPredicted RBP31.21■■■□□ 2.59
CGREF1-202ENST00000312734 FOXD4L3Q6VB84 417 aaPredicted RBP31.21■■■□□ 2.59
CGREF1-202ENST00000312734 RNF207Q6ZRF8 634 aa31.21■■■□□ 2.59
CGREF1-202ENST00000312734 FCHSD1Q86WN1 690 aa31.21■■■□□ 2.59
CGREF1-202ENST00000312734 PGBD1Q96JS3 809 aa31.21■■■□□ 2.59
CGREF1-202ENST00000312734 MROH8Q9H579 483 aa31.21■■■□□ 2.59
CGREF1-202ENST00000312734 CLK2P49760 499 aaKnown RBP31.2■■■□□ 2.59
CGREF1-202ENST00000312734 EARS2Q5JPH6 523 aaKnown RBP31.2■■■□□ 2.59
CGREF1-202ENST00000312734 ANKRD35Q8N283 1001 aa31.2■■■□□ 2.59
CGREF1-202ENST00000312734 SHCBP1Q8NEM2 672 aa31.2■■■□□ 2.59
CGREF1-202ENST00000312734 RPS6P62753 249 aaKnown RBP31.2■■■□□ 2.58
CGREF1-202ENST00000312734 BAATQ14032 418 aaPredicted RBP31.2■■■□□ 2.58
CGREF1-202ENST00000312734 TNFRSF25Q93038 417 aa31.2■■■□□ 2.58
CGREF1-202ENST00000312734 A1CFQ9NQ94 594 aaKnown RBP31.2■■■□□ 2.58
CGREF1-202ENST00000312734 PIK3CDO00329 1044 aa31.19■■■□□ 2.58
CGREF1-202ENST00000312734 HSD17B4P51659 736 aa31.19■■■□□ 2.58
CGREF1-202ENST00000312734 SLC30A10Q6XR72 485 aa31.19■■■□□ 2.58
CGREF1-202ENST00000312734 PIK3AP1Q6ZUJ8 805 aa31.19■■■□□ 2.58
CGREF1-202ENST00000312734 NOSTRINQ8IVI9 506 aa31.19■■■□□ 2.58
CGREF1-202ENST00000312734 ZSCAN16Q9H4T2 348 aaPredicted RBP31.19■■■□□ 2.58
CGREF1-202ENST00000312734 CCDC194A0A1B0GVG4 234 aa31.18■■■□□ 2.58
CGREF1-202ENST00000312734 FAM205CA6NFA0 338 aa31.18■■■□□ 2.58
CGREF1-202ENST00000312734 FAM173BQ6P4H8 233 aa31.18■■■□□ 2.58
CGREF1-202ENST00000312734 SYTL5Q8TDW5 730 aaPredicted RBP31.17■■■□□ 2.58
CGREF1-202ENST00000312734 CYP39A1Q9NYL5 469 aa31.17■■■□□ 2.58
CGREF1-202ENST00000312734 SPDYE3A6NKU9 549 aa31.16■■■□□ 2.58
CGREF1-202ENST00000312734 PURBQ96QR8 312 aaKnown RBP31.16■■■□□ 2.58
CGREF1-202ENST00000312734 MMP19Q99542 508 aa31.16■■■□□ 2.58
CGREF1-202ENST00000312734 COL20A1Q9P218 1284 aa31.16■■■□□ 2.58
CGREF1-202ENST00000312734 KRT25Q7Z3Z0 450 aa31.16■■■□□ 2.58
CGREF1-202ENST00000312734 MAP3K20Q9NYL2 800 aaKnown RBP31.16■■■□□ 2.58
CGREF1-202ENST00000312734 FCER1AP12319 257 aa31.15■■■□□ 2.58
CGREF1-202ENST00000312734 GHRHRQ02643 423 aa31.15■■■□□ 2.58
CGREF1-202ENST00000312734 KCTD2Q14681 263 aa31.15■■■□□ 2.58
CGREF1-202ENST00000312734 BRAPQ7Z569 592 aa31.15■■■□□ 2.58
CGREF1-202ENST00000312734 SAMD3Q8N6K7 520 aa31.15■■■□□ 2.58
CGREF1-202ENST00000312734 THSD7BQ9C0I4 1608 aa31.14■■■□□ 2.58
CGREF1-202ENST00000312734 MAPK4P31152 587 aa31.14■■■□□ 2.58
CGREF1-202ENST00000312734 AP3B2Q13367 1082 aa31.14■■■□□ 2.58
CGREF1-202ENST00000312734 GPR142Q7Z601 462 aa31.14■■■□□ 2.58
CGREF1-202ENST00000312734 DNAJC5GQ8N7S2 189 aa31.14■■■□□ 2.58
CGREF1-202ENST00000312734 TAAR1Q96RJ0 339 aa31.14■■■□□ 2.58
CGREF1-202ENST00000312734 ANO3Q9BYT9 981 aa31.14■■■□□ 2.58
CGREF1-202ENST00000312734 FOSP01100 380 aaPredicted RBP31.13■■■□□ 2.57
CGREF1-202ENST00000312734 ATP2B1P20020 1258 aa31.13■■■□□ 2.57
CGREF1-202ENST00000312734 NONOQ15233 471 aaKnown RBP eCLIP31.13■■■□□ 2.57
CGREF1-202ENST00000312734 INF2Q27J81 1249 aa31.13■■■□□ 2.57
CGREF1-202ENST00000312734 IVNS1ABPQ9Y6Y0 642 aa31.13■■■□□ 2.57
CGREF1-202ENST00000312734 PLEKHH3Q7Z736 793 aa31.13■■■□□ 2.57
CGREF1-202ENST00000312734 TEX2Q8IWB9 1127 aa31.13■■■□□ 2.57
CGREF1-202ENST00000312734 CHAMP1Q96JM3 812 aa31.13■■■□□ 2.57
CGREF1-202ENST00000312734 CFHR5Q9BXR6 569 aa31.13■■■□□ 2.57
CGREF1-202ENST00000312734 PCNTO95613 3336 aa31.12■■■□□ 2.57
CGREF1-202ENST00000312734 PFASO15067 1338 aa31.12■■■□□ 2.57
CGREF1-202ENST00000312734 PGK2P07205 417 aa31.12■■■□□ 2.57
CGREF1-202ENST00000312734 MAP2K1Q02750 393 aaPredicted RBP31.12■■■□□ 2.57
CGREF1-202ENST00000312734 MCTP2Q6DN12 878 aa31.12■■■□□ 2.57
CGREF1-202ENST00000312734 TBCKQ8TEA7 893 aa31.12■■■□□ 2.57
CGREF1-202ENST00000312734 UBXN2AP68543 259 aa31.11■■■□□ 2.57
CGREF1-202ENST00000312734 CNTN2Q02246 1040 aa31.11■■■□□ 2.57
CGREF1-202ENST00000312734 MYSM1Q5VVJ2 828 aa31.11■■■□□ 2.57
CGREF1-202ENST00000312734 TNPO1Q92973 898 aaKnown RBP31.11■■■□□ 2.57
CGREF1-202ENST00000312734 POTEB2H3BUK9 544 aa31.1■■■□□ 2.57
CGREF1-202ENST00000312734 STRNO43815 780 aa31.1■■■□□ 2.57
CGREF1-202ENST00000312734 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.1■■■□□ 2.57
CGREF1-202ENST00000312734 MAF1Q9H063 256 aa31.1■■■□□ 2.57
CGREF1-202ENST00000312734 PTPREP23469 700 aa31.09■■■□□ 2.57
CGREF1-202ENST00000312734 RMDN3Q96TC7 470 aa31.09■■■□□ 2.57
CGREF1-202ENST00000312734 BEGAINQ9BUH8 593 aa31.09■■■□□ 2.57
CGREF1-202ENST00000312734 ATP6V1DQ9Y5K8 247 aa31.09■■■□□ 2.57
CGREF1-202ENST00000312734 RBBP6Q7Z6E9 1792 aaKnown RBP31.09■■■□□ 2.57
CGREF1-202ENST00000312734 SP3Q02447 781 aa31.09■■■□□ 2.57
CGREF1-202ENST00000312734 NOL7Q9UMY1 257 aaKnown RBP31.09■■■□□ 2.57
CGREF1-202ENST00000312734 ADORA2AP29274 412 aa31.08■■■□□ 2.57
CGREF1-202ENST00000312734 TOB1P50616 345 aaPredicted RBP31.08■■■□□ 2.57
CGREF1-202ENST00000312734 DNM1Q05193 864 aaKnown RBP31.08■■■□□ 2.57
CGREF1-202ENST00000312734 NBR1Q14596 966 aa31.08■■■□□ 2.57
CGREF1-202ENST00000312734 ARHGEF16Q5VV41 709 aa31.08■■■□□ 2.57
CGREF1-202ENST00000312734 EIF2AK2P19525 551 aaKnown RBP31.07■■■□□ 2.56
CGREF1-202ENST00000312734 CTGFP29279 349 aa31.07■■■□□ 2.56
CGREF1-202ENST00000312734 LACTBP83111 547 aaPredicted RBP31.07■■■□□ 2.56
CGREF1-202ENST00000312734 ARHGAP39Q9C0H5 1083 aa31.07■■■□□ 2.56
CGREF1-202ENST00000312734 EHMT1Q9H9B1 1298 aa31.07■■■□□ 2.56
CGREF1-202ENST00000312734 SAGE1Q9NXZ1 904 aa31.07■■■□□ 2.56
CGREF1-202ENST00000312734 TFIP11Q9UBB9 837 aaKnown RBP31.07■■■□□ 2.56
CGREF1-202ENST00000312734 TSKSQ9UJT2 592 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms