RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 NOP53Q9NZM5 478 aaKnown RBP11.56□□□□□ -0.56
MSRB3-201ENST00000308259 ZNF142P52746 1687 aaPredicted RBP11.56□□□□□ -0.56
MSRB3-201ENST00000308259 TTF1Q15361 905 aaPredicted RBP11.55□□□□□ -0.56
MSRB3-201ENST00000308259 RCSD1Q6JBY9 416 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 DDX27Q96GQ7 796 aaKnown RBP11.55□□□□□ -0.56
MSRB3-201ENST00000308259 MTRQ99707 1265 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 ACTR5Q9H9F9 607 aaPredicted RBP11.55□□□□□ -0.56
MSRB3-201ENST00000308259 ATP6V0A4Q9HBG4 840 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 RHBDL2Q9NX52 303 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 RGL1Q9NZL6 768 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 TMOD2Q9NZR1 351 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 TJP1Q07157 1748 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 GOLGB1Q14789 3259 aaKnown RBP11.55□□□□□ -0.56
MSRB3-201ENST00000308259 MMP1P03956 469 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 AKNAD1Q5T1N1 836 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 ANKS4BQ8N8V4 417 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 NOA1Q8NC60 698 aaKnown RBP11.55□□□□□ -0.56
MSRB3-201ENST00000308259 HNRNPLLQ8WVV9 542 aaKnown RBP11.55□□□□□ -0.56
MSRB3-201ENST00000308259 BICD1Q96G01 975 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 PSMB7Q99436 277 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 SELENOOQ9BVL4 669 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 OSBPL1AQ9BXW6 950 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 ANKZF1Q9H8Y5 726 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 TRPC6Q9Y210 931 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 JAG2Q9Y219 1238 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 KCPQ6ZWJ8 1503 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 CDHR2Q9BYE9 1310 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 A0A087X0B3 334 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 CTCFP49711 727 aaPredicted RBP11.55□□□□□ -0.56
MSRB3-201ENST00000308259 MAP3K12Q12852 859 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 RBM26Q5T8P6 1007 aaKnown RBP11.55□□□□□ -0.56
MSRB3-201ENST00000308259 TCERG1LQ5VWI1 586 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 ADGRA1Q86SQ6 560 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 TRIM22Q8IYM9 498 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 TMEM87BQ96K49 555 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 FBXO2Q9UK22 296 aaPredicted RBP11.55□□□□□ -0.56
MSRB3-201ENST00000308259 MAPK8IP1Q9UQF2 711 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 MTMR7Q9Y216 660 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 CEP104O60308 925 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 FMNL1O95466 1100 aaPredicted RBP11.55□□□□□ -0.56
MSRB3-201ENST00000308259 LACTBP83111 547 aaPredicted RBP11.55□□□□□ -0.56
MSRB3-201ENST00000308259 SEPT7Q16181 437 aaKnown RBP11.55□□□□□ -0.56
MSRB3-201ENST00000308259 RASIP1Q5U651 963 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 SMIM5Q71RC9 77 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 TMEM139Q8IV31 216 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 SHISA4Q96DD7 197 aa11.55□□□□□ -0.56
MSRB3-201ENST00000308259 CETN3O15182 167 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 LUC7L3O95232 432 aaKnown RBP11.54□□□□□ -0.56
MSRB3-201ENST00000308259 SCNN1BP51168 640 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 MDM2Q00987 491 aaPredicted RBP11.54□□□□□ -0.56
MSRB3-201ENST00000308259 NNTQ13423 1086 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 PUM3Q15397 648 aaKnown RBP11.54□□□□□ -0.56
MSRB3-201ENST00000308259 ZNF174Q15697 407 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 ARFGAP2Q8N6H7 521 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 COG1Q8WTW3 980 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 BLZF1Q9H2G9 400 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 MRPL44Q9H9J2 332 aaKnown RBP11.54□□□□□ -0.56
MSRB3-201ENST00000308259 A1CFQ9NQ94 594 aaKnown RBP11.54□□□□□ -0.56
MSRB3-201ENST00000308259 C6orf229H3BNL8 230 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 ZNF189O75820 626 aaPredicted RBP11.54□□□□□ -0.56
MSRB3-201ENST00000308259 DDR1Q08345 913 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 C11orf91Q3C1V1 193 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 TC2NQ8N9U0 490 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 SLF1Q9BQI6 1058 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.54□□□□□ -0.56
MSRB3-201ENST00000308259 MYO5AQ9Y4I1 1855 aaKnown RBP11.54□□□□□ -0.56
MSRB3-201ENST00000308259 ERICH2A1L162 156 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 STX10O60499 249 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 DESP17661 470 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 CDC25AP30304 524 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 CCT6AP40227 531 aaKnown RBP11.54□□□□□ -0.56
MSRB3-201ENST00000308259 HOOK2Q96ED9 719 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 RBM17Q96I25 401 aaKnown RBP11.54□□□□□ -0.56
MSRB3-201ENST00000308259 HPCAL4Q9UM19 191 aa11.54□□□□□ -0.56
MSRB3-201ENST00000308259 ALS2Q96Q42 1657 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 ADRA2BP18089 450 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 PAFAH1B1P43034 410 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 MRPL12P52815 198 aaKnown RBP11.53□□□□□ -0.56
MSRB3-201ENST00000308259 ICA1Q05084 483 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 CCDC38Q502W7 563 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 CCDC92Q53HC0 331 aaPredicted RBP11.53□□□□□ -0.56
MSRB3-201ENST00000308259 SPATA21Q7Z572 469 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 FCHSD1Q86WN1 690 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 FBF1Q8TES7 1133 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 EYA3Q99504 573 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 UBAC1Q9BSL1 405 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 UBXN6Q9BZV1 441 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 RPS6KL1Q9Y6S9 549 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 EVI5O60447 810 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 PLEKHA8P1O95397 391 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 CD44P16070 742 aaKnown RBP11.53□□□□□ -0.56
MSRB3-201ENST00000308259 VAV2P52735 878 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 CCDC6Q16204 474 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 SPECC1LQ69YQ0 1117 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 MAEAQ7L5Y9 396 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 LPIN2Q92539 896 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 EEF2KMTQ96G04 330 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 ANKRD2Q9GZV1 360 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 VCPKMTQ9H867 229 aa11.53□□□□□ -0.56
MSRB3-201ENST00000308259 L3MBTL1Q9Y468 752 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms