RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 CNNM4Q6P4Q7 775 aa13.02□□□□□ -0.33
FOXP4-201ENST00000307972 CREG2Q8IUH2 290 aa13.02□□□□□ -0.33
FOXP4-201ENST00000307972 AENQ8WTP8 325 aaKnown RBP13.02□□□□□ -0.33
FOXP4-201ENST00000307972 SLC4A9Q96Q91 983 aa13.02□□□□□ -0.33
FOXP4-201ENST00000307972 RNASE9P60153 205 aaKnown RBP13.01□□□□□ -0.33
FOXP4-201ENST00000307972 ATP2B2Q01814 1243 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 MMS22LQ6ZRQ5 1243 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 MMGT1Q8N4V1 131 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 GPATCH11Q8N954 259 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 EIF3HO15372 352 aaKnown RBP eCLIP13.01□□□□□ -0.33
FOXP4-201ENST00000307972 KLRC4O43908 158 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 TECP42680 631 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 NAPAP54920 295 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 RASSF7Q02833 373 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 STAG2Q8N3U4 1231 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 OTUD6BQ8N6M0 293 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 SH2D4AQ9H788 454 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 POLD4Q9HCU8 107 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 WTIPA6NIX2 430 aaPredicted RBP13.01□□□□□ -0.33
FOXP4-201ENST00000307972 GNAQP50148 359 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 TXNRD1Q16881 649 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 EMBQ6PCB8 327 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 DYMQ7RTS9 669 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 NOX5Q96PH1 765 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 TRIM9Q9C026 710 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 CCSER1Q9C0I3 900 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 KBTBD4Q9NVX7 518 aa13.01□□□□□ -0.33
FOXP4-201ENST00000307972 FGFR1OPO95684 399 aaKnown RBP13□□□□□ -0.33
FOXP4-201ENST00000307972 PPP1R2P41236 205 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 CFAP221Q4G0U5 840 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 PARP10Q53GL7 1025 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 RNF187Q5TA31 235 aaPredicted RBP13□□□□□ -0.33
FOXP4-201ENST00000307972 SOGA3Q5TF21 947 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 ZNF662Q6ZS27 426 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 POTEDQ86YR6 584 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 IFT20Q8IY31 132 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 NDST4Q9H3R1 872 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 VAT1LQ9HCJ6 419 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 DCP1AQ9NPI6 582 aaPredicted RBP13□□□□□ -0.33
FOXP4-201ENST00000307972 LUC7LQ9NQ29 371 aaKnown RBP13□□□□□ -0.33
FOXP4-201ENST00000307972 OR52Z1P0C646 297 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 GUCY2FP51841 1108 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 MAATS1Q7Z4T9 603 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 CCDC84Q86UT8 332 aaPredicted RBP13□□□□□ -0.33
FOXP4-201ENST00000307972 SH2D3CQ8N5H7 860 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 C4orf32Q8N8J7 132 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 ARL8AQ96BM9 186 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 CCDC43Q96MW1 224 aaKnown RBP13□□□□□ -0.33
FOXP4-201ENST00000307972 NLRC4Q9NPP4 1024 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 COL5A2P05997 1499 aaPredicted RBP13□□□□□ -0.33
FOXP4-201ENST00000307972 PPARDQ03181 441 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 ALS2CLQ60I27 953 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 B4GALNT4Q76KP1 1039 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 DZIP1Q86YF9 867 aaKnown RBP13□□□□□ -0.33
FOXP4-201ENST00000307972 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13□□□□□ -0.33
FOXP4-201ENST00000307972 TTYH3Q9C0H2 523 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 CUEDC2Q9H467 287 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 ARHGAP20Q9P2F6 1191 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 CAPN7Q9Y6W3 813 aa13□□□□□ -0.33
FOXP4-201ENST00000307972 PARP4Q9UKK3 1724 aaKnown RBP13□□□□□ -0.33
FOXP4-201ENST00000307972 ZC3H4Q9UPT8 1303 aaKnown RBP12.99□□□□□ -0.33
FOXP4-201ENST00000307972 GOLGA6L10A6NI86 522 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 ZNF263O14978 683 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 ORC4O43929 436 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 TSPY3P0CV98 308 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 TSPY8P0CW00 308 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 GUCY2DQ02846 1103 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 ARID5AQ03989 594 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 NNTQ13423 1086 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 HLTFQ14527 1009 aaKnown RBP eCLIP12.99□□□□□ -0.33
FOXP4-201ENST00000307972 VWA3BQ502W6 1294 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 BICDL1Q6ZP65 573 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 SV2BQ7L1I2 683 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 ZNF444Q8N0Y2 327 aaPredicted RBP12.99□□□□□ -0.33
FOXP4-201ENST00000307972 PCDHA6Q9UN73 950 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 PLAGL2Q9UPG8 496 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 PCDHA8Q9Y5H6 950 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 TIAM2Q8IVF5 1701 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 ESYT3A0FGR9 886 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 LRRC53A6NM62 1247 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 MARCH6O60337 910 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 KRT14P02533 472 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 GOLGA8HP0CJ92 632 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 ATP6V1AP38606 617 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 TXKP42681 527 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 MECOMQ03112 1051 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 FBXW10Q5XX13 1052 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 BRINP3Q76B58 766 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 ERGIC2Q96RQ1 377 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 EPB41L5Q9HCM4 733 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 ARPP21Q9UBL0 812 aaPredicted RBP12.99□□□□□ -0.33
FOXP4-201ENST00000307972 NFU1Q9UMS0 254 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 UBR2Q8IWV8 1755 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 SHOX2O60902 331 aaPredicted RBP12.99□□□□□ -0.33
FOXP4-201ENST00000307972 TSEN2Q8NCE0 465 aaKnown RBP12.99□□□□□ -0.33
FOXP4-201ENST00000307972 IQCDQ96DY2 449 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 MS4A14Q96JA4 679 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 SH3GLB2Q9NR46 395 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 BTG4Q9NY30 223 aa12.99□□□□□ -0.33
FOXP4-201ENST00000307972 TFCP2L1Q9NZI6 479 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms