RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 CCNT1O60563 726 aaKnown RBP13.46□□□□□ -0.25
TRIM40-205ENST00000307859 PLA2G6O60733 806 aa13.46□□□□□ -0.25
TRIM40-205ENST00000307859 PRR29P0C7W0 189 aa13.46□□□□□ -0.25
TRIM40-205ENST00000307859 LMOD1P29536 600 aaPredicted RBP13.46□□□□□ -0.25
TRIM40-205ENST00000307859 USP50Q70EL3 339 aaPredicted RBP13.46□□□□□ -0.25
TRIM40-205ENST00000307859 AMNQ9BXJ7 453 aa13.46□□□□□ -0.25
TRIM40-205ENST00000307859 PRR12Q9ULL5 1215 aa13.46□□□□□ -0.25
TRIM40-205ENST00000307859 PCDHA1Q9Y5I3 950 aa13.46□□□□□ -0.25
TRIM40-205ENST00000307859 GOLGA6L19H0YKK7 550 aa13.46□□□□□ -0.26
TRIM40-205ENST00000307859 TXLNAP40222 546 aa13.46□□□□□ -0.26
TRIM40-205ENST00000307859 STAT2P52630 851 aa13.46□□□□□ -0.26
TRIM40-205ENST00000307859 UBE2SQ16763 222 aa13.46□□□□□ -0.26
TRIM40-205ENST00000307859 PDXDC2PQ6P474 469 aa13.46□□□□□ -0.26
TRIM40-205ENST00000307859 SARM1Q6SZW1 724 aa13.46□□□□□ -0.26
TRIM40-205ENST00000307859 FBXO11Q86XK2 927 aa13.46□□□□□ -0.26
TRIM40-205ENST00000307859 SPICE1Q8N0Z3 855 aa13.46□□□□□ -0.26
TRIM40-205ENST00000307859 TRIML1Q8N9V2 468 aa13.46□□□□□ -0.26
TRIM40-205ENST00000307859 IQUBQ8NA54 791 aa13.46□□□□□ -0.26
TRIM40-205ENST00000307859 CCSER1Q9C0I3 900 aa13.46□□□□□ -0.26
TRIM40-205ENST00000307859 GPRC5DQ9NZD1 345 aa13.46□□□□□ -0.26
TRIM40-205ENST00000307859 MAN1B1Q9UKM7 699 aa13.46□□□□□ -0.26
TRIM40-205ENST00000307859 PAPPA2Q9BXP8 1791 aa13.45□□□□□ -0.26
TRIM40-205ENST00000307859 BECN2A8MW95 431 aa13.45□□□□□ -0.26
TRIM40-205ENST00000307859 H7C1D1 291 aa13.45□□□□□ -0.26
TRIM40-205ENST00000307859 FMR1Q06787 632 aaKnown RBP eCLIP13.45□□□□□ -0.26
TRIM40-205ENST00000307859 IKQ13123 557 aaPredicted RBP13.45□□□□□ -0.26
TRIM40-205ENST00000307859 FAM83BQ5T0W9 1011 aa13.45□□□□□ -0.26
TRIM40-205ENST00000307859 MCTP2Q6DN12 878 aa13.45□□□□□ -0.26
TRIM40-205ENST00000307859 PPP4R3AQ6IN85 833 aa13.45□□□□□ -0.26
TRIM40-205ENST00000307859 APOBEC3FQ8IUX4 373 aaKnown RBP13.45□□□□□ -0.26
TRIM40-205ENST00000307859 TEX2Q8IWB9 1127 aa13.45□□□□□ -0.26
TRIM40-205ENST00000307859 AOPEPQ8N6M6 819 aa13.45□□□□□ -0.26
TRIM40-205ENST00000307859 SMARCE1Q969G3 411 aa13.45□□□□□ -0.26
TRIM40-205ENST00000307859 PAGE5Q96GU1 130 aa13.45□□□□□ -0.26
TRIM40-205ENST00000307859 AK8Q96MA6 479 aa13.45□□□□□ -0.26
TRIM40-205ENST00000307859 MTMR9Q96QG7 549 aa13.45□□□□□ -0.26
TRIM40-205ENST00000307859 DEFB129Q9H1M3 183 aa13.45□□□□□ -0.26
TRIM40-205ENST00000307859 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.45□□□□□ -0.26
TRIM40-205ENST00000307859 CCDC39Q9UFE4 941 aa13.45□□□□□ -0.26
TRIM40-205ENST00000307859 SCAF8Q9UPN6 1271 aaKnown RBP13.45□□□□□ -0.26
TRIM40-205ENST00000307859 TRPM7Q96QT4 1865 aa13.45□□□□□ -0.26
TRIM40-205ENST00000307859 RLFQ13129 1914 aa13.44□□□□□ -0.26
TRIM40-205ENST00000307859 COL11A1P12107 1806 aaPredicted RBP13.44□□□□□ -0.26
TRIM40-205ENST00000307859 CTNND1O60716 968 aaKnown RBP13.44□□□□□ -0.26
TRIM40-205ENST00000307859 GCFC2P16383 781 aaKnown RBP13.44□□□□□ -0.26
TRIM40-205ENST00000307859 NOGQ13253 232 aa13.44□□□□□ -0.26
TRIM40-205ENST00000307859 AP3B2Q13367 1082 aa13.44□□□□□ -0.26
TRIM40-205ENST00000307859 FAM160B2Q86V87 743 aa13.44□□□□□ -0.26
TRIM40-205ENST00000307859 POTEDQ86YR6 584 aa13.44□□□□□ -0.26
TRIM40-205ENST00000307859 GRAMD1CQ8IYS0 662 aa13.44□□□□□ -0.26
TRIM40-205ENST00000307859 CHURC1Q8WUH1 139 aa13.44□□□□□ -0.26
TRIM40-205ENST00000307859 NAP1L4Q99733 375 aaKnown RBP13.44□□□□□ -0.26
TRIM40-205ENST00000307859 GLIS2Q9BZE0 524 aaPredicted RBP13.44□□□□□ -0.26
TRIM40-205ENST00000307859 SAGE1Q9NXZ1 904 aa13.44□□□□□ -0.26
TRIM40-205ENST00000307859 PTPRFP10586 1907 aa13.44□□□□□ -0.26
TRIM40-205ENST00000307859 OTOFQ9HC10 1997 aa13.43□□□□□ -0.26
TRIM40-205ENST00000307859 MEIS2O14770 477 aa13.43□□□□□ -0.26
TRIM40-205ENST00000307859 IKBKBO14920 756 aa13.43□□□□□ -0.26
TRIM40-205ENST00000307859 SMC2O95347 1197 aa13.43□□□□□ -0.26
TRIM40-205ENST00000307859 TDP2O95551 362 aa13.43□□□□□ -0.26
TRIM40-205ENST00000307859 BMP6P22004 513 aa13.43□□□□□ -0.26
TRIM40-205ENST00000307859 SNAP25P60880 206 aa13.43□□□□□ -0.26
TRIM40-205ENST00000307859 PLCB2Q00722 1185 aa13.43□□□□□ -0.26
TRIM40-205ENST00000307859 DPYDQ12882 1025 aa13.43□□□□□ -0.26
TRIM40-205ENST00000307859 TRAF1Q13077 416 aa13.43□□□□□ -0.26
TRIM40-205ENST00000307859 MORC3Q14149 939 aa13.43□□□□□ -0.26
TRIM40-205ENST00000307859 NCAPHQ15003 741 aa13.43□□□□□ -0.26
TRIM40-205ENST00000307859 PLA2G4DQ86XP0 818 aa13.43□□□□□ -0.26
TRIM40-205ENST00000307859 FAM43AQ8N2R8 423 aa13.43□□□□□ -0.26
TRIM40-205ENST00000307859 TRPM4Q8TD43 1214 aa13.43□□□□□ -0.26
TRIM40-205ENST00000307859 RANBP17Q9H2T7 1088 aaKnown RBP13.43□□□□□ -0.26
TRIM40-205ENST00000307859 DISC1Q9NRI5 854 aa13.43□□□□□ -0.26
TRIM40-205ENST00000307859 TRAF5O00463 557 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 OPLAHO14841 1288 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 SLC37A4O43826 429 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 FXR2P51116 673 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRIM40-205ENST00000307859 ZNF75DP51815 510 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 CALCRLQ16602 461 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 DCAF15Q66K64 600 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 ISM2Q6H9L7 571 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 MOXD1Q6UVY6 613 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.42□□□□□ -0.26
TRIM40-205ENST00000307859 IGSF22Q8N9C0 903 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 MLKLQ8NB16 471 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 CRYGNQ8WXF5 182 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 HOOK2Q96ED9 719 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 ANO3Q9BYT9 981 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 KIAA1683Q9H0B3 1180 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 ZNF112Q9UJU3 913 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 FEM1BQ9UK73 627 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 PP2D1A8MPX8 630 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 SMTNL1A8MU46 457 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 ESPNB1AK53 854 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 USP17L15C9J2P7 530 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 USP17L13C9JLJ4 530 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 USP17L11C9JVI0 530 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 USP17L18D6R9N7 530 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 USP17L22D6RA61 530 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 USP17L17D6RBQ6 530 aa13.42□□□□□ -0.26
TRIM40-205ENST00000307859 USP17L19D6RCP7 530 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms