RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 PPP1R13LQ8WUF5 828 aa14.14□□□□□ -0.15
SMIM4-201ENST00000307106 TRERF1Q96PN7 1200 aa14.14□□□□□ -0.15
SMIM4-201ENST00000307106 MTG1Q9BT17 334 aaPredicted RBP14.14□□□□□ -0.15
SMIM4-201ENST00000307106 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.14□□□□□ -0.15
SMIM4-201ENST00000307106 VTA1Q9NP79 307 aa14.14□□□□□ -0.15
SMIM4-201ENST00000307106 GPHNQ9NQX3 736 aaPredicted RBP14.14□□□□□ -0.15
SMIM4-201ENST00000307106 PAG1Q9NWQ8 432 aa14.14□□□□□ -0.15
SMIM4-201ENST00000307106 C5orf42Q9H799 3197 aa14.13□□□□□ -0.15
SMIM4-201ENST00000307106 KMT2EQ8IZD2 1858 aa14.13□□□□□ -0.15
SMIM4-201ENST00000307106 POTEB3A0JP26 581 aa14.13□□□□□ -0.15
SMIM4-201ENST00000307106 CHGBP05060 677 aa14.13□□□□□ -0.15
SMIM4-201ENST00000307106 BMP3P12645 472 aa14.13□□□□□ -0.15
SMIM4-201ENST00000307106 ALAS1P13196 640 aa14.13□□□□□ -0.15
SMIM4-201ENST00000307106 ERVK-21P61565 698 aa14.13□□□□□ -0.15
SMIM4-201ENST00000307106 BFSP2Q13515 415 aa14.13□□□□□ -0.15
SMIM4-201ENST00000307106 NBPF20Q3BBV1 942 aa14.13□□□□□ -0.15
SMIM4-201ENST00000307106 TKFCQ3LXA3 575 aa14.13□□□□□ -0.15
SMIM4-201ENST00000307106 ZKSCAN2Q63HK3 967 aa14.13□□□□□ -0.15
SMIM4-201ENST00000307106 NFRKBQ6P4R8 1299 aa14.13□□□□□ -0.15
SMIM4-201ENST00000307106 POTEBQ6S5H4 581 aa14.13□□□□□ -0.15
SMIM4-201ENST00000307106 RPAP2Q8IXW5 612 aaPredicted RBP14.13□□□□□ -0.15
SMIM4-201ENST00000307106 LRRC47Q8N1G4 583 aaKnown RBP14.13□□□□□ -0.15
SMIM4-201ENST00000307106 RHPN1Q8TCX5 695 aa14.13□□□□□ -0.15
SMIM4-201ENST00000307106 TGS1Q96RS0 853 aaKnown RBP14.13□□□□□ -0.15
SMIM4-201ENST00000307106 ISY1Q9ULR0 285 aaKnown RBP14.13□□□□□ -0.15
SMIM4-201ENST00000307106 USP34Q70CQ2 3546 aa14.12□□□□□ -0.15
SMIM4-201ENST00000307106 IGKV6D-41A0A0C4DH26 115 aa14.12□□□□□ -0.15
SMIM4-201ENST00000307106 STAT2P52630 851 aa14.12□□□□□ -0.15
SMIM4-201ENST00000307106 DEFB103AP81534 67 aa14.12□□□□□ -0.15
SMIM4-201ENST00000307106 PUS10Q3MIT2 529 aaKnown RBP14.12□□□□□ -0.15
SMIM4-201ENST00000307106 SLFN13Q68D06 897 aa14.12□□□□□ -0.15
SMIM4-201ENST00000307106 CEP85Q6P2H3 762 aa14.12□□□□□ -0.15
SMIM4-201ENST00000307106 CLASRPQ8N2M8 674 aaKnown RBP14.12□□□□□ -0.15
SMIM4-201ENST00000307106 GMCL1P1Q8NEA9 526 aa14.12□□□□□ -0.15
SMIM4-201ENST00000307106 OR6J1Q8NGC5 347 aa14.12□□□□□ -0.15
SMIM4-201ENST00000307106 MKL1Q969V6 931 aa14.12□□□□□ -0.15
SMIM4-201ENST00000307106 CEP95Q96GE4 821 aa14.12□□□□□ -0.15
SMIM4-201ENST00000307106 WDR11Q9BZH6 1224 aa14.12□□□□□ -0.15
SMIM4-201ENST00000307106 CYP39A1Q9NYL5 469 aa14.12□□□□□ -0.15
SMIM4-201ENST00000307106 NOD1Q9Y239 953 aa14.12□□□□□ -0.15
SMIM4-201ENST00000307106 TECTAO75443 2155 aa14.12□□□□□ -0.15
SMIM4-201ENST00000307106 MYO7AQ13402 2215 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 LINC01553A4QN01 128 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 ZNF316A6NFI3 1004 aaPredicted RBP14.11□□□□□ -0.15
SMIM4-201ENST00000307106 MINDY4BA8MYZ0 360 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 TMEM232C9JQI7 657 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 GJB5O95377 273 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 IFIT2P09913 472 aaKnown RBP14.11□□□□□ -0.15
SMIM4-201ENST00000307106 PTPN11Q06124 597 aaPredicted RBP14.11□□□□□ -0.15
SMIM4-201ENST00000307106 UBE3CQ15386 1083 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 LRRFIP1Q32MZ4 808 aaKnown RBP14.11□□□□□ -0.15
SMIM4-201ENST00000307106 SBK1Q52WX2 424 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 HSP90AB4PQ58FF6 505 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 MUM1L1Q5H9M0 696 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 HFE2Q6ZVN8 426 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 ITPRIPQ8IWB1 547 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 NEK9Q8TD19 979 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 MORC4Q8TE76 937 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 ANKS1AQ92625 1134 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 PURBQ96QR8 312 aaKnown RBP14.11□□□□□ -0.15
SMIM4-201ENST00000307106 BOLA2Q9H3K6 86 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 SYNPO2Q9UMS6 1093 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 TRIOO75962 3097 aa14.11□□□□□ -0.15
SMIM4-201ENST00000307106 MYH6P13533 1939 aa14.1□□□□□ -0.15
SMIM4-201ENST00000307106 H3BQ06 376 aaPredicted RBP14.1□□□□□ -0.15
SMIM4-201ENST00000307106 TTLL1O95922 423 aa14.1□□□□□ -0.15
SMIM4-201ENST00000307106 IKQ13123 557 aaPredicted RBP14.1□□□□□ -0.15
SMIM4-201ENST00000307106 BRDTQ58F21 947 aaPredicted RBP14.1□□□□□ -0.15
SMIM4-201ENST00000307106 NSMFQ6X4W1 530 aa14.1□□□□□ -0.15
SMIM4-201ENST00000307106 FAM160B2Q86V87 743 aa14.1□□□□□ -0.15
SMIM4-201ENST00000307106 ZNF444Q8N0Y2 327 aaPredicted RBP14.1□□□□□ -0.15
SMIM4-201ENST00000307106 AFAP1L1Q8TED9 768 aa14.1□□□□□ -0.15
SMIM4-201ENST00000307106 CHURC1Q8WUH1 139 aa14.1□□□□□ -0.15
SMIM4-201ENST00000307106 CRBNQ96SW2 442 aa14.1□□□□□ -0.15
SMIM4-201ENST00000307106 PHOX2BQ99453 314 aa14.1□□□□□ -0.15
SMIM4-201ENST00000307106 RAD9AQ99638 391 aa14.1□□□□□ -0.15
SMIM4-201ENST00000307106 PUS7LQ9H0K6 701 aaKnown RBP14.1□□□□□ -0.15
SMIM4-201ENST00000307106 BCL11AQ9H165 835 aa14.1□□□□□ -0.15
SMIM4-201ENST00000307106 MTMR4Q9NYA4 1195 aa14.1□□□□□ -0.15
SMIM4-201ENST00000307106 ZP2Q05996 745 aa14.09□□□□□ -0.15
SMIM4-201ENST00000307106 CNKSR3Q6P9H4 555 aa14.09□□□□□ -0.15
SMIM4-201ENST00000307106 FTSJ3Q8IY81 847 aaKnown RBP14.09□□□□□ -0.15
SMIM4-201ENST00000307106 CCDC155Q8N6L0 562 aa14.09□□□□□ -0.15
SMIM4-201ENST00000307106 CAGE1Q8TC20 777 aa14.09□□□□□ -0.15
SMIM4-201ENST00000307106 STAG1Q8WVM7 1258 aa14.09□□□□□ -0.15
SMIM4-201ENST00000307106 MFSD14AQ96MC6 490 aa14.09□□□□□ -0.15
SMIM4-201ENST00000307106 ADD3Q9UEY8 706 aaKnown RBP14.09□□□□□ -0.15
SMIM4-201ENST00000307106 RAD50Q92878 1312 aa14.09□□□□□ -0.15
SMIM4-201ENST00000307106 RBM47A0AV96 593 aaKnown RBP14.08□□□□□ -0.16
SMIM4-201ENST00000307106 KPNA6O60684 536 aa14.08□□□□□ -0.16
SMIM4-201ENST00000307106 PRDM1O75626 825 aa14.08□□□□□ -0.16
SMIM4-201ENST00000307106 ALDH5A1P51649 535 aaPredicted RBP14.08□□□□□ -0.16
SMIM4-201ENST00000307106 CHMP4BP1P59074 171 aa14.08□□□□□ -0.16
SMIM4-201ENST00000307106 SNAP25P60880 206 aa14.08□□□□□ -0.16
SMIM4-201ENST00000307106 GPNMBQ14956 572 aa14.08□□□□□ -0.16
SMIM4-201ENST00000307106 PTGISQ16647 500 aa14.08□□□□□ -0.16
SMIM4-201ENST00000307106 LRRC8DQ7L1W4 858 aa14.08□□□□□ -0.16
SMIM4-201ENST00000307106 FBXO22Q8NEZ5 403 aa14.08□□□□□ -0.16
SMIM4-201ENST00000307106 CHMP4CQ96CF2 233 aa14.08□□□□□ -0.16
SMIM4-201ENST00000307106 KIF1BPQ96EK5 621 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms