RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 TINF2Q9BSI4 451 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 UNC93B1Q9H1C4 597 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 ALDH8A1Q9H2A2 487 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 SLKQ9H2G2 1235 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 CNPY2Q9Y2B0 182 aa12.7□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 hCG_1642624A0A1W2PR95 340 aa12.69□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 ADD1P35611 737 aaKnown RBP12.69□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 SOX10P56693 466 aa12.69□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 CNTN2Q02246 1040 aa12.69□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 MAP3K21Q5TCX8 1036 aa12.69□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 TRIM22Q8IYM9 498 aa12.69□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 SAMD3Q8N6K7 520 aa12.69□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 FAM133AQ8N9E0 248 aa12.69□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 CUL5Q93034 780 aa12.69□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 LARP6Q9BRS8 491 aaKnown RBP12.69□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 NRBP1Q9UHY1 535 aa12.69□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 KIAA0100Q14667 2235 aaKnown RBP12.69□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 LOC102724159A0A0B4J2E5 919 aa12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 GCOM1H8Y6P7 765 aaPredicted RBP12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 ST18O60284 1047 aa12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 MSCO60682 206 aa12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 CDKL5O76039 1030 aa12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 POLR2MP0CAP2 368 aa12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 CYBAP13498 195 aa12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 ALDH5A1P51649 535 aaPredicted RBP12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 NAPAP54920 295 aa12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 PWP2Q15269 919 aaKnown RBP12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 RABEP1Q15276 862 aa12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 PPP1R18Q6NYC8 613 aa12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 MAMDC4Q6UXC1 1216 aa12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 ARMCX2Q7L311 632 aa12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 DNERQ8NFT8 737 aa12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 SLC26A6Q9BXS9 759 aa12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 RNF26Q9BY78 433 aaPredicted RBP12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 BACH2Q9BYV9 841 aa12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 NCOA5Q9HCD5 579 aaKnown RBP12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 FAM217BQ9NTX9 383 aaPredicted RBP12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 MAP3K20Q9NYL2 800 aaKnown RBP12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 ZHX1Q9UKY1 873 aaPredicted RBP12.68□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 SOWAHBA6NEL2 793 aa12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 GJB1P08034 283 aa12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 IFNAR1P17181 557 aa12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 CCND3P30281 292 aaPredicted RBP12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 SSRP1Q08945 709 aaKnown RBP12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 ARHGEF16Q5VV41 709 aa12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 IL27Q8NEV9 243 aa12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 SMARCC2Q8TAQ2 1214 aa12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 CCDC12Q8WUD4 166 aaPredicted RBP12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 GPKOWQ92917 476 aaPredicted RBP eCLIP12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 PHKBQ93100 1093 aa12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 FGD4Q96M96 766 aa12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 TBC1D32Q96NH3 1257 aa12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 DEFB118Q96PH6 123 aa12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 ABHD16BQ9H3Z7 469 aa12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 PAK6Q9NQU5 681 aaPredicted RBP12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 TPCN1Q9ULQ1 816 aa12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 V9GY48 417 aaPredicted RBP12.67□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 PRPF3O43395 683 aaKnown RBP12.66□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 SCG2P13521 617 aa12.66□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 AKR1A1P14550 325 aa12.66□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 CAPN2P17655 700 aa12.66□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 HSD17B4P51659 736 aa12.66□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 PDE4DQ08499 809 aa12.66□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 FUT2Q10981 343 aa12.66□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 SCRN1Q12765 414 aa12.66□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 PFKFB3Q16875 520 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 WWC2Q6AWC2 1192 aa12.66□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 SYTL5Q8TDW5 730 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 NSUN6Q8TEA1 469 aaKnown RBP12.66□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 U2AF1L4Q8WU68 220 aaKnown RBP12.66□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 RMDN3Q96TC7 470 aa12.66□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 DDX20Q9UHI6 824 aaKnown RBP12.66□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 MYH7BA7E2Y1 1941 aa12.66□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 POTEFA5A3E0 1075 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 OPLAHO14841 1288 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 SEPT4O43236 478 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 PFKFB2O60825 505 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 SGPL1O95470 568 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 TFRCP02786 760 aaKnown RBP12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 EIF2AK2P19525 551 aaKnown RBP12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 HOXA13P31271 388 aaPredicted RBP12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 GJA8P48165 433 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 GHRHRQ02643 423 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 ACVR2BQ13705 512 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 NTRK3Q16288 839 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 PRAMEF19Q5SWL8 479 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 FCHSD1Q86WN1 690 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 CCDC148Q8NFR7 591 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 TBC1D5Q92609 795 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 PURBQ96QR8 312 aaKnown RBP12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 GLT8D2Q9H1C3 349 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 PSTPIP2Q9H939 334 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 EHMT1Q9H9B1 1298 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 VTA1Q9NP79 307 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 BARHL2Q9NY43 387 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 FAM184BQ9ULE4 1060 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 LIMCH1Q9UPQ0 1083 aa12.65□□□□□ -0.38
CSPG4P1Y-201ENST00000306641 ASTN1O14525 1302 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms