RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 CAVIN4Q5BKX8 364 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 SFMBT2Q5VUG0 894 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 SV2BQ7L1I2 683 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 ZBTB38Q8NAP3 1195 aaPredicted RBP14.39□□□□□ -0.11
TRIM35-201ENST00000305364 DISC1Q9NRI5 854 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 SWAP70Q9UH65 585 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 NOVA2Q9UNW9 492 aaKnown RBP14.39□□□□□ -0.11
TRIM35-201ENST00000305364 CCNE1P24864 410 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 KLHL30Q0D2K2 578 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 MMGT1Q8N4V1 131 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 TTLL11Q8NHH1 800 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 MICAL1Q8TDZ2 1067 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 ATP6V1G3Q96LB4 118 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 TACO1Q9BSH4 297 aaKnown RBP14.39□□□□□ -0.11
TRIM35-201ENST00000305364 CYP2D7A0A087X1C5 515 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 FAM170AA1A519 330 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 CPP00450 1065 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 PLEKP08567 350 aaPredicted RBP14.39□□□□□ -0.11
TRIM35-201ENST00000305364 MDH1P40925 334 aaKnown RBP14.39□□□□□ -0.11
TRIM35-201ENST00000305364 NAPAP54920 295 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 GIGYF2Q6Y7W6 1299 aaKnown RBP14.39□□□□□ -0.11
TRIM35-201ENST00000305364 RAB34Q9BZG1 259 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 DPH5Q9H2P9 285 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 SEC63Q9UGP8 760 aaKnown RBP14.39□□□□□ -0.11
TRIM35-201ENST00000305364 CAPN6Q9Y6Q1 641 aa14.39□□□□□ -0.11
TRIM35-201ENST00000305364 CYP27B1O15528 508 aa14.38□□□□□ -0.11
TRIM35-201ENST00000305364 CCNT1O60563 726 aaKnown RBP14.38□□□□□ -0.11
TRIM35-201ENST00000305364 PPP1R2P41236 205 aa14.38□□□□□ -0.11
TRIM35-201ENST00000305364 BCAMP50895 628 aa14.38□□□□□ -0.11
TRIM35-201ENST00000305364 NGLY1Q96IV0 654 aa14.38□□□□□ -0.11
TRIM35-201ENST00000305364 PBX1P40424 430 aa14.38□□□□□ -0.11
TRIM35-201ENST00000305364 CTSWP56202 376 aa14.38□□□□□ -0.11
TRIM35-201ENST00000305364 SPTY2D1Q68D10 685 aaPredicted RBP14.38□□□□□ -0.11
TRIM35-201ENST00000305364 WHAMMQ8TF30 809 aa14.38□□□□□ -0.11
TRIM35-201ENST00000305364 UBA5Q9GZZ9 404 aa14.38□□□□□ -0.11
TRIM35-201ENST00000305364 GSG1L2A8MUP6 293 aa14.38□□□□□ -0.11
TRIM35-201ENST00000305364 TXKP42681 527 aa14.38□□□□□ -0.11
TRIM35-201ENST00000305364 SARNPP82979 210 aaKnown RBP14.38□□□□□ -0.11
TRIM35-201ENST00000305364 ATP2C1P98194 919 aaPredicted RBP14.38□□□□□ -0.11
TRIM35-201ENST00000305364 GFPT1Q06210 699 aaPredicted RBP14.38□□□□□ -0.11
TRIM35-201ENST00000305364 EP400NLQ6ZTU2 488 aa14.38□□□□□ -0.11
TRIM35-201ENST00000305364 PARP9Q8IXQ6 854 aa14.38□□□□□ -0.11
TRIM35-201ENST00000305364 CCDC26Q8TAB7 109 aa14.38□□□□□ -0.11
TRIM35-201ENST00000305364 PACSIN2Q9UNF0 486 aaPredicted RBP14.38□□□□□ -0.11
TRIM35-201ENST00000305364 REXO2Q9Y3B8 237 aaKnown RBP14.38□□□□□ -0.11
TRIM35-201ENST00000305364 PXDNQ92626 1479 aa14.38□□□□□ -0.11
TRIM35-201ENST00000305364 GMNCA6NCL1 334 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 PPP1R12BO60237 982 aaPredicted RBP14.37□□□□□ -0.11
TRIM35-201ENST00000305364 ADSSL1Q8N142 457 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 TSEN2Q8NCE0 465 aaKnown RBP14.37□□□□□ -0.11
TRIM35-201ENST00000305364 DNAJC7Q99615 494 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 NSRP1Q9H0G5 558 aaKnown RBP14.37□□□□□ -0.11
TRIM35-201ENST00000305364 GOLGA6L10A0A0M3HER8 536 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 USP17L12C9JPN9 530 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 USP17L21D6R901 530 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 TRAPPC10P48553 1259 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 POLR2FP61218 127 aaKnown RBP14.37□□□□□ -0.11
TRIM35-201ENST00000305364 DNAJC10Q8IXB1 793 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 CCDC13Q8IYE1 715 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 ZNF444Q8N0Y2 327 aaPredicted RBP14.37□□□□□ -0.11
TRIM35-201ENST00000305364 AENQ8WTP8 325 aaKnown RBP14.37□□□□□ -0.11
TRIM35-201ENST00000305364 NDST4Q9H3R1 872 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 EPB41L4AQ9HCS5 686 aaPredicted RBP14.37□□□□□ -0.11
TRIM35-201ENST00000305364 SLC40A1Q9NP59 571 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 SRGNP10124 158 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 KRT13P13646 458 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 CASP7P55210 303 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 RASGRF1Q13972 1273 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 GLE1Q53GS7 698 aaKnown RBP14.37□□□□□ -0.11
TRIM35-201ENST00000305364 STAG1Q8WVM7 1258 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 ZNF622Q969S3 477 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRIM35-201ENST00000305364 IQCDQ96DY2 449 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 HAUS2Q9NVX0 235 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 DONSONQ9NYP3 566 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 CHD2O14647 1828 aaKnown RBP14.37□□□□□ -0.11
TRIM35-201ENST00000305364 MAP3K15Q6ZN16 1313 aa14.37□□□□□ -0.11
TRIM35-201ENST00000305364 LRRC53A6NM62 1247 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 PTGISQ16647 500 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 EARS2Q5JPH6 523 aaKnown RBP14.36□□□□□ -0.11
TRIM35-201ENST00000305364 TMC4Q7Z404 712 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 DAAM2Q86T65 1068 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 CCDC155Q8N6L0 562 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 KRIT1O00522 736 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 PALMO75781 387 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 TECP42680 631 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 MTMR3Q13615 1198 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 BICDL1Q6ZP65 573 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 CCDC63Q8NA47 563 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 MYCBPAPQ8TBZ2 947 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 AGPSO00116 658 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 PDE8AO60658 829 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 CTNND1O60716 968 aaKnown RBP14.36□□□□□ -0.11
TRIM35-201ENST00000305364 CRNKL1Q9BZJ0 848 aaKnown RBP14.36□□□□□ -0.11
TRIM35-201ENST00000305364 SH2D4AQ9H788 454 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 RNF14Q9UBS8 474 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 UTP11Q9Y3A2 253 aaKnown RBP14.36□□□□□ -0.11
TRIM35-201ENST00000305364 KIF4AO95239 1232 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 SCP2P22307 547 aa14.36□□□□□ -0.11
TRIM35-201ENST00000305364 ARID4AP29374 1257 aaPredicted RBP14.36□□□□□ -0.11
TRIM35-201ENST00000305364 ALX1Q15699 326 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms