RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CTSWP56202 376 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 C6orf118Q5T5N4 469 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 NXNQ6DKJ4 435 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 JADE1Q6IE81 842 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 VSTM4Q8IW00 320 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 SUPT20HQ8NEM7 779 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 SYMPKQ92797 1274 aaKnown RBP8.32□□□□□ -1.08
SF3B3-201ENST00000302516 CNOT6LQ96LI5 555 aaKnown RBP8.32□□□□□ -1.08
SF3B3-201ENST00000302516 IPO5O00410 1097 aaKnown RBP8.32□□□□□ -1.08
SF3B3-201ENST00000302516 BAG2O95816 211 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 HARSP12081 509 aaKnown RBP8.32□□□□□ -1.08
SF3B3-201ENST00000302516 MFAP3P55082 362 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 PSMD2Q13200 908 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 MCF2L2Q86YR7 1114 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 PDZD8Q8NEN9 1154 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 C19orf44Q9H6X5 657 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 NR1D1P20393 614 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 PHEXP78562 749 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 EXOC8Q8IYI6 725 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 FBXO18Q8NFZ0 1043 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 RNF26Q9BY78 433 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-201ENST00000302516 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-201ENST00000302516 KCNJ14Q9UNX9 436 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 K7ENM7 598 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 M0QZ92 97 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 PLCD3Q8N3E9 789 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 TTC16Q8NEE8 873 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 TUBGCP2Q9BSJ2 902 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 MRPL40Q9NQ50 206 aaKnown RBP8.31□□□□□ -1.08
SF3B3-201ENST00000302516 CACNA1FO60840 1977 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 FMNL1O95466 1100 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-201ENST00000302516 BFSP1Q12934 665 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 NBPF10Q6P3W6 841 aaKnown RBP8.31□□□□□ -1.08
SF3B3-201ENST00000302516 TTLL7Q6ZT98 887 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 ZBTB8OSQ8IWT0 167 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 SUCLG2Q96I99 432 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 RASGRF2O14827 1237 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 GSTA1P08263 222 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 GSTA2P09210 222 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 GSPT1P15170 499 aaKnown RBP8.31□□□□□ -1.08
SF3B3-201ENST00000302516 ZNF658Q5TYW1 1059 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-201ENST00000302516 TMED8Q6PL24 325 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-201ENST00000302516 NME8Q8N427 588 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 DAAM1Q9Y4D1 1078 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 GCFC2P16383 781 aaKnown RBP8.31□□□□□ -1.08
SF3B3-201ENST00000302516 FANCBQ8NB91 859 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 GDAP1L1Q96MZ0 367 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 SPTLC3Q9NUV7 552 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 RPAP1Q9BWH6 1393 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-201ENST00000302516 UNC13BO14795 1591 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 GNPTABQ3T906 1256 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 DYMQ7RTS9 669 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 FAM178BQ8IXR5 827 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 USP28Q96RU2 1077 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 LSG1Q9H089 658 aaKnown RBP8.31□□□□□ -1.08
SF3B3-201ENST00000302516 RFX7Q2KHR2 1363 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 CASP14P31944 242 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 MAN2A1Q16706 1144 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 NLRC4Q9NPP4 1024 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 ERVV-2B6SEH9 535 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 ZNF189O75820 626 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-201ENST00000302516 IFNB1P01574 187 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 CD19P15391 556 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 PIK3CAP42336 1068 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 CAV1Q03135 178 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 SEMA3FQ13275 785 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 PPP2R5AQ15172 486 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 LRRC23Q53EV4 343 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-201ENST00000302516 CHURC1Q8WUH1 139 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 SPDL1Q96EA4 605 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 PSTPIP2Q9H939 334 aa8.31□□□□□ -1.08
SF3B3-201ENST00000302516 NOP53Q9NZM5 478 aaKnown RBP8.31□□□□□ -1.08
SF3B3-201ENST00000302516 NEO1Q92859 1461 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 FOSP01100 380 aaPredicted RBP8.3□□□□□ -1.08
SF3B3-201ENST00000302516 ABCB4P21439 1286 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 STX1BP61266 288 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 ATG16L1Q676U5 607 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 SARM1Q6SZW1 724 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 SCYL1Q96KG9 808 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 ZMAT2Q96NC0 199 aaKnown RBP8.3□□□□□ -1.08
SF3B3-201ENST00000302516 FMO2Q99518 471 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 NSFL1CQ9UNZ2 370 aaKnown RBP8.3□□□□□ -1.08
SF3B3-201ENST00000302516 CCPG1Q9ULG6 757 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 SYNGAP1Q96PV0 1343 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 A6NJR5 290 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 CTNND1O60716 968 aaKnown RBP8.3□□□□□ -1.08
SF3B3-201ENST00000302516 HEXIM1O94992 359 aaKnown RBP8.3□□□□□ -1.08
SF3B3-201ENST00000302516 CYP2J2P51589 502 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 DYNC1I2Q13409 638 aaKnown RBP8.3□□□□□ -1.08
SF3B3-201ENST00000302516 ARHGAP44Q17R89 818 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 GPR108Q9NPR9 543 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 MAPK13O15264 365 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 BUB1O43683 1085 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 LRRC63Q05C16 580 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 EHHADHQ08426 723 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 ADAM9Q13443 819 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 DRP2Q13474 957 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 TPH2Q8IWU9 490 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 DEPTORQ8TB45 409 aa8.3□□□□□ -1.08
SF3B3-201ENST00000302516 NEK9Q8TD19 979 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms