RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 SMARCA1P28370 1054 aa24.62■■□□□ 1.53
TPM4-201ENST00000300933 MTF1Q14872 753 aa24.62■■□□□ 1.53
TPM4-201ENST00000300933 SIAH1Q8IUQ4 282 aa24.62■■□□□ 1.53
TPM4-201ENST00000300933 MNS1Q8NEH6 495 aa24.62■■□□□ 1.53
TPM4-201ENST00000300933 C7orf43Q8WVR3 580 aa24.62■■□□□ 1.53
TPM4-201ENST00000300933 ADD3Q9UEY8 706 aaKnown RBP24.62■■□□□ 1.53
TPM4-201ENST00000300933 CLRN2A0PK11 232 aa24.61■■□□□ 1.53
TPM4-201ENST00000300933 NRDCO43847 1150 aa24.61■■□□□ 1.53
TPM4-201ENST00000300933 SLC1A4P43007 532 aa24.61■■□□□ 1.53
TPM4-201ENST00000300933 CALCRLQ16602 461 aa24.61■■□□□ 1.53
TPM4-201ENST00000300933 BAG1Q99933 345 aaPredicted RBP24.61■■□□□ 1.53
TPM4-201ENST00000300933 NUDT12Q9BQG2 462 aa24.61■■□□□ 1.53
TPM4-201ENST00000300933 DESI2Q9BSY9 194 aa24.61■■□□□ 1.53
TPM4-201ENST00000300933 CCSER1Q9C0I3 900 aa24.61■■□□□ 1.53
TPM4-201ENST00000300933 PI4KBQ9UBF8 816 aa24.61■■□□□ 1.53
TPM4-201ENST00000300933 MYO1BO43795 1136 aa24.61■■□□□ 1.53
TPM4-201ENST00000300933 KLRC4O43908 158 aa24.61■■□□□ 1.53
TPM4-201ENST00000300933 RBL2Q08999 1139 aa24.61■■□□□ 1.53
TPM4-201ENST00000300933 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.61■■□□□ 1.53
TPM4-201ENST00000300933 SCAF8Q9UPN6 1271 aaKnown RBP24.61■■□□□ 1.53
TPM4-201ENST00000300933 ETF1P62495 437 aaKnown RBP24.6■■□□□ 1.53
TPM4-201ENST00000300933 RRP1BQ14684 758 aaKnown RBP24.6■■□□□ 1.53
TPM4-201ENST00000300933 KRT31Q15323 416 aa24.6■■□□□ 1.53
TPM4-201ENST00000300933 POTEAQ6S8J7 498 aa24.6■■□□□ 1.53
TPM4-201ENST00000300933 IGSF22Q8N9C0 903 aa24.6■■□□□ 1.53
TPM4-201ENST00000300933 KBTBD4Q9NVX7 518 aa24.6■■□□□ 1.53
TPM4-201ENST00000300933 TOGARAM2Q6ZUX3 1019 aa24.6■■□□□ 1.53
TPM4-201ENST00000300933 SPICE1Q8N0Z3 855 aa24.6■■□□□ 1.53
TPM4-201ENST00000300933 CNKSR1Q969H4 720 aa24.6■■□□□ 1.53
TPM4-201ENST00000300933 ZCCHC17Q9NP64 241 aaKnown RBP24.6■■□□□ 1.53
TPM4-201ENST00000300933 ARGLU1Q9NWB6 273 aaPredicted RBP24.6■■□□□ 1.53
TPM4-201ENST00000300933 ZBTB12Q9Y330 459 aaPredicted RBP24.6■■□□□ 1.53
TPM4-201ENST00000300933 TCP10L2B9ZVM9 353 aa24.59■■□□□ 1.53
TPM4-201ENST00000300933 PRPHP41219 470 aa24.59■■□□□ 1.53
TPM4-201ENST00000300933 PYM1Q9BRP8 204 aaKnown RBP24.59■■□□□ 1.53
TPM4-201ENST00000300933 CARD6Q9BX69 1037 aa24.59■■□□□ 1.53
TPM4-201ENST00000300933 LAD1O00515 517 aa24.59■■□□□ 1.53
TPM4-201ENST00000300933 FCER1AP12319 257 aa24.59■■□□□ 1.53
TPM4-201ENST00000300933 SLFN13Q68D06 897 aa24.59■■□□□ 1.53
TPM4-201ENST00000300933 PES1O00541 588 aaKnown RBP24.58■■□□□ 1.53
TPM4-201ENST00000300933 N4BP3O15049 544 aa24.58■■□□□ 1.53
TPM4-201ENST00000300933 ZBTB5O15062 677 aa24.58■■□□□ 1.53
TPM4-201ENST00000300933 ZRANB2O95218 330 aaKnown RBP eCLIP24.58■■□□□ 1.53
TPM4-201ENST00000300933 PSTPIP2Q9H939 334 aa24.58■■□□□ 1.53
TPM4-201ENST00000300933 RGS17Q9UGC6 210 aaPredicted RBP24.58■■□□□ 1.53
TPM4-201ENST00000300933 RWDD2AQ9UIY3 292 aa24.58■■□□□ 1.53
TPM4-201ENST00000300933 MYH4Q9Y623 1939 aa24.58■■□□□ 1.53
TPM4-201ENST00000300933 FANCGO15287 622 aa24.58■■□□□ 1.53
TPM4-201ENST00000300933 HMGB2P26583 209 aaKnown RBP24.58■■□□□ 1.53
TPM4-201ENST00000300933 IKQ13123 557 aaPredicted RBP24.58■■□□□ 1.53
TPM4-201ENST00000300933 QRICH1Q2TAL8 776 aa24.58■■□□□ 1.53
TPM4-201ENST00000300933 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.58■■□□□ 1.53
TPM4-201ENST00000300933 LRWD1Q9UFC0 647 aa24.58■■□□□ 1.53
TPM4-201ENST00000300933 ESYT2A0FGR8 921 aa24.58■■□□□ 1.52
TPM4-201ENST00000300933 ASIC1P78348 528 aa24.58■■□□□ 1.52
TPM4-201ENST00000300933 ICA1Q05084 483 aa24.58■■□□□ 1.52
TPM4-201ENST00000300933 DEFB132Q7Z7B7 95 aa24.58■■□□□ 1.52
TPM4-201ENST00000300933 RMND1Q9NWS8 449 aa24.58■■□□□ 1.52
TPM4-201ENST00000300933 RNF225M0QZC1 329 aaPredicted RBP24.57■■□□□ 1.52
TPM4-201ENST00000300933 TULP2O00295 520 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 GH2P01242 217 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 STK4Q13043 487 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 USH1GQ495M9 461 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 DYMQ7RTS9 669 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 MTMR9Q96QG7 549 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 IDI2Q9BXS1 227 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 ZNF277Q9NRM2 450 aaPredicted RBP24.57■■□□□ 1.52
TPM4-201ENST00000300933 STK32BQ9NY57 414 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 PCDHA1Q9Y5I3 950 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 SOWAHDA6NJG2 315 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 KCNJ18B7U540 433 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 CASP14P31944 242 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 KCNJ12Q14500 433 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 MCM6Q14566 821 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 GPATCH4Q5T3I0 446 aaKnown RBP24.57■■□□□ 1.52
TPM4-201ENST00000300933 ADSSL1Q8N142 457 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 EHD4Q9H223 541 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 DHX36Q9H2U1 1008 aaKnown RBP24.57■■□□□ 1.52
TPM4-201ENST00000300933 RIC8AQ9NPQ8 531 aa24.57■■□□□ 1.52
TPM4-201ENST00000300933 A0A0U1RQJ8 604 aa24.56■■□□□ 1.52
TPM4-201ENST00000300933 PDE4DQ08499 809 aa24.56■■□□□ 1.52
TPM4-201ENST00000300933 SAMD1Q6SPF0 538 aaPredicted RBP24.56■■□□□ 1.52
TPM4-201ENST00000300933 IRF2BP1Q8IU81 584 aa24.56■■□□□ 1.52
TPM4-201ENST00000300933 ATRIPQ8WXE1 791 aa24.56■■□□□ 1.52
TPM4-201ENST00000300933 CCDC17Q96LX7 622 aa24.56■■□□□ 1.52
TPM4-201ENST00000300933 CAMKK2Q96RR4 588 aa24.56■■□□□ 1.52
TPM4-201ENST00000300933 CSRNP1Q96S65 589 aa24.56■■□□□ 1.52
TPM4-201ENST00000300933 TRIM9Q9C026 710 aa24.56■■□□□ 1.52
TPM4-201ENST00000300933 FAM193AP78312 1265 aa24.56■■□□□ 1.52
TPM4-201ENST00000300933 TEX35Q5T0J7 233 aa24.56■■□□□ 1.52
TPM4-201ENST00000300933 CDAN1Q8IWY9 1227 aa24.56■■□□□ 1.52
TPM4-201ENST00000300933 REXO1L1PQ8IX06 675 aa24.56■■□□□ 1.52
TPM4-201ENST00000300933 SERPINA10Q9UK55 444 aa24.56■■□□□ 1.52
TPM4-201ENST00000300933 QSER1Q2KHR3 1735 aa24.56■■□□□ 1.52
TPM4-201ENST00000300933 F5H6K3 240 aa24.55■■□□□ 1.52
TPM4-201ENST00000300933 FXR1P51114 621 aaKnown RBP eCLIP24.55■■□□□ 1.52
TPM4-201ENST00000300933 KLRC3Q07444 240 aa24.55■■□□□ 1.52
TPM4-201ENST00000300933 ABCB5Q2M3G0 1257 aa24.55■■□□□ 1.52
TPM4-201ENST00000300933 TCP11X2Q5H9J9 407 aa24.55■■□□□ 1.52
TPM4-201ENST00000300933 CUL5Q93034 780 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms