RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 ASB14A6NK59 587 aa9.24□□□□□ -0.93
SNRPD1-201ENST00000300413 CETPP11597 493 aa9.24□□□□□ -0.93
SNRPD1-201ENST00000300413 YWHAEP62258 255 aaKnown RBP9.24□□□□□ -0.93
SNRPD1-201ENST00000300413 PTPN14Q15678 1187 aa9.24□□□□□ -0.93
SNRPD1-201ENST00000300413 MYOCDQ8IZQ8 938 aa9.24□□□□□ -0.93
SNRPD1-201ENST00000300413 IGDCC4Q8TDY8 1250 aa9.24□□□□□ -0.93
SNRPD1-201ENST00000300413 MRPL44Q9H9J2 332 aaKnown RBP9.24□□□□□ -0.93
SNRPD1-201ENST00000300413 ZBTB12Q9Y330 459 aaPredicted RBP9.24□□□□□ -0.93
SNRPD1-201ENST00000300413 RGPD1P0DJD0 1748 aa9.24□□□□□ -0.93
SNRPD1-201ENST00000300413 SFNP31947 248 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 KRT76Q01546 638 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 SPDYE2Q495Y8 402 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 XKR9Q5GH70 373 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 DACT2Q5SW24 774 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 C3orf67Q6ZVT6 689 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 LMBR1Q8WVP7 490 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 PLIN2Q99541 437 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 RIC8AQ9NPQ8 531 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 RNF146Q9NTX7 359 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 TRPC6Q9Y210 931 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 ESYT2A0FGR8 921 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 PSMD2Q13200 908 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 ODR4Q5SWX8 454 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 USP50Q70EL3 339 aaPredicted RBP9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 SERTAD1Q9UHV2 236 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 COL16A1Q07092 1604 aaPredicted RBP9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 GAKO14976 1311 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 ERLIN1O75477 346 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 MCM3P25205 808 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 USP8P40818 1118 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 NEDD9Q14511 834 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 FBXL16Q8N461 479 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 LARP4BQ92615 738 aaKnown RBP9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 KIFAP3Q92845 792 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 TEX13BQ9BXU2 312 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 RIC1Q4ADV7 1423 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 VIL1P09327 827 aaKnown RBP9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 VEGFAP15692 232 aaPredicted RBP9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 STAT3P40763 770 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 SREBF2Q12772 1141 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 DMP1Q13316 513 aaPredicted RBP9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 QRICH1Q2TAL8 776 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 SNRNP48Q6IEG0 339 aaKnown RBP9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 KIF18AQ8NI77 898 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 SLC7A3Q8WY07 619 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 PCDHA6Q9UN73 950 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 PCDHA8Q9Y5H6 950 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 USP54Q70EL1 1684 aa9.23□□□□□ -0.93
SNRPD1-201ENST00000300413 ESPNB1AK53 854 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 UBXN1Q04323 297 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 PDE4CQ08493 712 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 MTERF4Q7Z6M4 381 aaKnown RBP9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 ADGRF4Q8IZF3 695 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 FERMT1Q9BQL6 677 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 ADPGKQ9BRR6 497 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 NOC4LQ9BVI4 516 aaKnown RBP9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 MMRN2Q9H8L6 949 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 CTNND2Q9UQB3 1225 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 LUC7L2Q9Y383 392 aaKnown RBP9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 NWD2Q9ULI1 1742 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 GCNT3O95395 438 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 SLFN14P0C7P3 912 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 KLRK1P26718 216 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 EPHX2P34913 555 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 PAFAH1B1P43034 410 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 STOX1Q6ZVD7 989 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 SYMPKQ92797 1274 aaKnown RBP9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 OTUD5Q96G74 571 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 TRERF1Q96PN7 1200 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 TRIM6Q9C030 488 aaPredicted RBP9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 RPAP3Q9H6T3 665 aaPredicted RBP9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 NDUFB10O96000 172 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 SLFNL1Q499Z3 407 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 FAM26FQ5R3K3 315 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 CHST13Q8NET6 341 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 IMPACTQ9P2X3 320 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 PFASO15067 1338 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 TCRBV5S4A2TA0A5A2 114 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 FCER1AP12319 257 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 P4HA1P13674 534 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 POLGP54098 1239 aaPredicted RBP9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 FAM178BQ8IXR5 827 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 FAM81BQ96LP2 452 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 GBP3Q9H0R5 595 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.22□□□□□ -0.932e-6■■■■■ 96.1
SNRPD1-201ENST00000300413 CLIC4Q9Y696 253 aa9.22□□□□□ -0.93
SNRPD1-201ENST00000300413 LARGE1O95461 756 aa9.21□□□□□ -0.93
SNRPD1-201ENST00000300413 ERCC5P28715 1186 aaPredicted RBP9.21□□□□□ -0.93
SNRPD1-201ENST00000300413 CAP2P40123 477 aa9.21□□□□□ -0.93
SNRPD1-201ENST00000300413 HSP90B2PQ58FF3 399 aa9.21□□□□□ -0.93
SNRPD1-201ENST00000300413 ERO1BQ86YB8 467 aa9.21□□□□□ -0.93
SNRPD1-201ENST00000300413 ZNF526Q8TF50 670 aaPredicted RBP9.21□□□□□ -0.93
SNRPD1-201ENST00000300413 CPLX3Q8WVH0 158 aa9.21□□□□□ -0.93
SNRPD1-201ENST00000300413 RMDN3Q96TC7 470 aa9.21□□□□□ -0.93
SNRPD1-201ENST00000300413 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.21□□□□□ -0.93
SNRPD1-201ENST00000300413 DLG5Q8TDM6 1919 aa9.21□□□□□ -0.93
SNRPD1-201ENST00000300413 STRCQ7RTU9 1775 aa9.21□□□□□ -0.93
SNRPD1-201ENST00000300413 TBX3O15119 743 aa9.21□□□□□ -0.93
SNRPD1-201ENST00000300413 EXOC3O60645 756 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms