RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 PYM1Q9BRP8 204 aaKnown RBP14.44□□□□□ -0.1
TVP23A-201ENST00000299866 TLR10Q9BXR5 811 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 PLAAQ9Y263 795 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 NID2Q14112 1375 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 EPHB6O15197 1021 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 PDE8BO95263 885 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 CSF1RP07333 972 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 PRLRP16471 622 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 SF3A3Q12874 501 aaKnown RBP eCLIP14.44□□□□□ -0.1
TVP23A-201ENST00000299866 HLTFQ14527 1009 aaKnown RBP eCLIP14.44□□□□□ -0.1
TVP23A-201ENST00000299866 CFAP221Q4G0U5 840 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 CCDC178Q5BJE1 867 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 ANKRD40Q6AI12 368 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 ZNF572Q7Z3I7 529 aaPredicted RBP14.44□□□□□ -0.1
TVP23A-201ENST00000299866 PARP9Q8IXQ6 854 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 RETREG2Q8NC44 543 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 TNFRSF25Q93038 417 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 RNF41Q9H4P4 317 aaPredicted RBP14.44□□□□□ -0.1
TVP23A-201ENST00000299866 GOLGA6L10A6NI86 522 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 C21orf2O43822 256 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 RPSAP08865 295 aaKnown RBP14.43□□□□□ -0.1
TVP23A-201ENST00000299866 UQCRFS1P1P0C7P4 283 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 FUT2Q10981 343 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 ENAHQ8N8S7 591 aaPredicted RBP14.43□□□□□ -0.1
TVP23A-201ENST00000299866 CASKIN2Q8WXE0 1202 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 DISC1Q9NRI5 854 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 DDX20Q9UHI6 824 aaKnown RBP14.43□□□□□ -0.1
TVP23A-201ENST00000299866 NEBLO76041 1014 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 TMOD1P28289 359 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 RASGRF1Q13972 1273 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 SEC23AQ15436 765 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 CYB5D1Q6P9G0 228 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 RRAGAQ7L523 313 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 RASGRP4Q8TDF6 673 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 ESR2Q92731 530 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 MTMR8Q96EF0 704 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 CYP2D7A0A087X1C5 515 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 PAX7P23759 505 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 ODF2Q5BJF6 829 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 KLHL7Q8IXQ5 586 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 NOC3LQ8WTT2 800 aaKnown RBP14.43□□□□□ -0.1
TVP23A-201ENST00000299866 SLC24A3Q9HC58 644 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 PACSIN2Q9UNF0 486 aaPredicted RBP14.43□□□□□ -0.1
TVP23A-201ENST00000299866 RTL9Q8NET4 1388 aa14.43□□□□□ -0.1
TVP23A-201ENST00000299866 DNM1LO00429 736 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 FTCDO95954 541 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 CLNS1AP54105 237 aaKnown RBP14.42□□□□□ -0.1
TVP23A-201ENST00000299866 GFPT1Q06210 699 aaPredicted RBP14.42□□□□□ -0.1
TVP23A-201ENST00000299866 ITGB3BPQ13352 177 aaPredicted RBP14.42□□□□□ -0.1
TVP23A-201ENST00000299866 QPCTQ16769 361 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 NAALADL2Q58DX5 795 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 TOM1L2Q6ZVM7 507 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 PROCA1Q8NCQ7 364 aaPredicted RBP14.42□□□□□ -0.1
TVP23A-201ENST00000299866 HPS3Q969F9 1004 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 ZNF622Q969S3 477 aaKnown RBP eCLIP14.42□□□□□ -0.1
TVP23A-201ENST00000299866 GDF3Q9NR23 364 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 KLRC4O43908 158 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 UBA7P41226 1012 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 PDE4DQ08499 809 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 KLHDC7AQ5VTJ3 777 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 CABLES1Q8TDN4 633 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 P2RX5Q93086 422 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.42□□□□□ -0.1
TVP23A-201ENST00000299866 ARID4AP29374 1257 aaPredicted RBP14.42□□□□□ -0.1
TVP23A-201ENST00000299866 TDRD12Q587J7 1177 aaKnown RBP14.42□□□□□ -0.1
TVP23A-201ENST00000299866 MIIPQ5JXC2 388 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 FAM228AQ86W67 206 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 FUKQ8N0W3 1084 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 ZBTB38Q8NAP3 1195 aaPredicted RBP14.42□□□□□ -0.1
TVP23A-201ENST00000299866 ZNF512BQ96KM6 892 aaPredicted RBP14.42□□□□□ -0.1
TVP23A-201ENST00000299866 ZSCAN10Q96SZ4 725 aaPredicted RBP14.42□□□□□ -0.1
TVP23A-201ENST00000299866 PAGR1Q9BTK6 254 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 OSBPL7Q9BZF2 842 aa14.42□□□□□ -0.1
TVP23A-201ENST00000299866 TPX2Q9ULW0 747 aaKnown RBP14.42□□□□□ -0.1
TVP23A-201ENST00000299866 IQSEC3Q9UPP2 1182 aaPredicted RBP14.42□□□□□ -0.1
TVP23A-201ENST00000299866 MYH7P12883 1935 aa14.41□□□□□ -0.1
TVP23A-201ENST00000299866 GMNCA6NCL1 334 aa14.41□□□□□ -0.1
TVP23A-201ENST00000299866 HMGB1P1B2RPK0 211 aaPredicted RBP14.41□□□□□ -0.1
TVP23A-201ENST00000299866 OPLAHO14841 1288 aa14.41□□□□□ -0.1
TVP23A-201ENST00000299866 EZRP15311 586 aaKnown RBP14.41□□□□□ -0.1
TVP23A-201ENST00000299866 TNFRSF8P28908 595 aa14.41□□□□□ -0.1
TVP23A-201ENST00000299866 C6orf89Q6UWU4 347 aa14.41□□□□□ -0.1
TVP23A-201ENST00000299866 GIMAP8Q8ND71 665 aaPredicted RBP14.41□□□□□ -0.1
TVP23A-201ENST00000299866 NOX5Q96PH1 765 aa14.41□□□□□ -0.1
TVP23A-201ENST00000299866 LRP2BPQ9P2M1 347 aa14.41□□□□□ -0.1
TVP23A-201ENST00000299866 PLAGL2Q9UPG8 496 aa14.41□□□□□ -0.1
TVP23A-201ENST00000299866 MYH13Q9UKX3 1938 aa14.41□□□□□ -0.1
TVP23A-201ENST00000299866 LRRC53A6NM62 1247 aa14.41□□□□□ -0.1
TVP23A-201ENST00000299866 PPP1R12BO60237 982 aaPredicted RBP14.41□□□□□ -0.1
TVP23A-201ENST00000299866 FCER1AP12319 257 aa14.41□□□□□ -0.1
TVP23A-201ENST00000299866 LONP1P36776 959 aaKnown RBP14.41□□□□□ -0.1
TVP23A-201ENST00000299866 SLC1A4P43007 532 aa14.41□□□□□ -0.1
TVP23A-201ENST00000299866 GLE1Q53GS7 698 aaKnown RBP14.41□□□□□ -0.1
TVP23A-201ENST00000299866 TACO1Q9BSH4 297 aaKnown RBP14.41□□□□□ -0.1
TVP23A-201ENST00000299866 GCFC2P16383 781 aaKnown RBP14.4□□□□□ -0.1
TVP23A-201ENST00000299866 STK4Q13043 487 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 PLCB4Q15147 1175 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 WLSQ5T9L3 541 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 DTHD1Q6ZMT9 781 aa14.4□□□□□ -0.1
TVP23A-201ENST00000299866 SRBD1Q8N5C6 995 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms