RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 LARP4BQ92615 738 aaKnown RBP11.32□□□□□ -0.6
GABRB3-201ENST00000299267 RABGAP1Q9Y3P9 1069 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 LRRIQ4A6NIV6 560 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 TRAPPC10P48553 1259 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 EVX2Q03828 476 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 STRN3Q13033 797 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 BRDTQ58F21 947 aaPredicted RBP11.32□□□□□ -0.6
GABRB3-201ENST00000299267 RNF207Q6ZRF8 634 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 TICAM2Q86XR7 235 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 MYOCDQ8IZQ8 938 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 KIF1AQ12756 1690 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 NWD1Q149M9 1564 aa11.32□□□□□ -0.6
GABRB3-201ENST00000299267 AKR1B15C9JRZ8 316 aaPredicted RBP11.31□□□□□ -0.6
GABRB3-201ENST00000299267 MARK3P27448 753 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 ECE1P42892 770 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 SBK1Q52WX2 424 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 AXDND1Q5T1B0 1012 aaPredicted RBP11.31□□□□□ -0.6
GABRB3-201ENST00000299267 RNF169Q8NCN4 708 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 AKT1S1Q96B36 256 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 BAG1Q99933 345 aaPredicted RBP11.31□□□□□ -0.6
GABRB3-201ENST00000299267 GTPBP4Q9BZE4 634 aaKnown RBP11.31□□□□□ -0.6
GABRB3-201ENST00000299267 ZHX1Q9UKY1 873 aaPredicted RBP11.31□□□□□ -0.6
GABRB3-201ENST00000299267 KRT5P13647 590 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 SLF1Q9BQI6 1058 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 HERC5Q9UII4 1024 aaKnown RBP11.31□□□□□ -0.6
GABRB3-201ENST00000299267 HACL1Q9UJ83 578 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 SRPRBQ9Y5M8 271 aaKnown RBP11.31□□□□□ -0.6
GABRB3-201ENST00000299267 ARHGAP44Q17R89 818 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 RTFDC1Q9BY42 306 aaPredicted RBP11.31□□□□□ -0.6
GABRB3-201ENST00000299267 BHMT2Q9H2M3 363 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 GTPBP6O43824 516 aaPredicted RBP11.31□□□□□ -0.6
GABRB3-201ENST00000299267 PAFAH1B1P43034 410 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 SYT10Q6XYQ8 523 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 FAM160B2Q86V87 743 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 POTEDQ86YR6 584 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 ZFPM1Q8IX07 1006 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 TMEM87AQ8NBN3 555 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 GOLPH3LQ9H4A5 285 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 RNF146Q9NTX7 359 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 BARHL2Q9NY43 387 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 SEPT9Q9UHD8 586 aaPredicted RBP11.31□□□□□ -0.6
GABRB3-201ENST00000299267 NRBP1Q9UHY1 535 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 HPS5Q9UPZ3 1129 aa11.31□□□□□ -0.6
GABRB3-201ENST00000299267 FOXN1O15353 648 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 SLFN14P0C7P3 912 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 STAT3P40763 770 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 GRIPAP1Q4V328 841 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 C16orf86Q6ZW13 317 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 PRPF38AQ8NAV1 312 aaKnown RBP11.3□□□□□ -0.6
GABRB3-201ENST00000299267 ZNF668Q96K58 619 aaPredicted RBP11.3□□□□□ -0.6
GABRB3-201ENST00000299267 CAPZA3Q96KX2 299 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 RPAP3Q9H6T3 665 aaPredicted RBP11.3□□□□□ -0.6
GABRB3-201ENST00000299267 PEAK1Q9H792 1746 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 NALCNQ8IZF0 1738 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 K7ENM7 598 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 CLIC2O15247 247 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 KRT19P08727 400 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 CCDC175P0C221 793 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 C9orf131Q5VYM1 1079 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 USP49Q70CQ1 688 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 FAM151AQ8WW52 585 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 TRIM6Q9C030 488 aaPredicted RBP11.3□□□□□ -0.6
GABRB3-201ENST00000299267 SERPINA10Q9UK55 444 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 PDHBP11177 359 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 TM4SF1P30408 202 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 RNASE9P60153 205 aaKnown RBP11.3□□□□□ -0.6
GABRB3-201ENST00000299267 ARHGAP4P98171 946 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 ZNF543Q08ER8 600 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 KIF5AQ12840 1032 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 DEPTORQ8TB45 409 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 DCAF4Q8WV16 495 aa11.3□□□□□ -0.6
GABRB3-201ENST00000299267 TCRBV5S4A2TA0A5A2 114 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 TNNI1P19237 187 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 TERF1P54274 439 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 PPP4CP60510 307 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 TROAPQ12815 778 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 MORC3Q14149 939 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 ZNF569Q5MCW4 686 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 OTUD6AQ7L8S5 288 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 LDHDQ86WU2 507 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 TRERF1Q96PN7 1200 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 LARSQ9P2J5 1176 aaKnown RBP11.29□□□□□ -0.6
GABRB3-201ENST00000299267 ABCB11O95342 1321 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 KDM3AQ9Y4C1 1321 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 DLATP10515 647 aaKnown RBP11.29□□□□□ -0.6
GABRB3-201ENST00000299267 TAL1P17542 331 aaPredicted RBP11.29□□□□□ -0.6
GABRB3-201ENST00000299267 PTPREP23469 700 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 POLGP54098 1239 aaPredicted RBP11.29□□□□□ -0.6
GABRB3-201ENST00000299267 APOBEC3FQ8IUX4 373 aaKnown RBP11.29□□□□□ -0.6
GABRB3-201ENST00000299267 C2orf69Q8N8R5 385 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 ALS2CR12Q96Q35 445 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 PSMB7Q99436 277 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 DDX4Q9NQI0 724 aaKnown RBP11.29□□□□□ -0.6
GABRB3-201ENST00000299267 GDAQ9Y2T3 454 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 KIF2AO00139 706 aaPredicted RBP11.29□□□□□ -0.6
GABRB3-201ENST00000299267 DKC1O60832 514 aaKnown RBP eCLIP11.29□□□□□ -0.6
GABRB3-201ENST00000299267 OSBPP22059 807 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 MTERF2Q49AM1 385 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 CEP170P1Q96L14 293 aa11.29□□□□□ -0.6
GABRB3-201ENST00000299267 SAMSN1Q9NSI8 373 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms