RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 GNA11P29992 359 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 NAALADL2Q58DX5 795 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 NT5DC1Q5TFE4 455 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 C4orf32Q8N8J7 132 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 TRIML1Q8N9V2 468 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 CCDC12Q8WUD4 166 aaPredicted RBP11.31□□□□□ -0.6
FOXN4-201ENST00000299162 PDGFDQ9GZP0 370 aaPredicted RBP11.31□□□□□ -0.6
FOXN4-201ENST00000299162 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.31□□□□□ -0.6
FOXN4-201ENST00000299162 LAMB2P55268 1798 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 ABL1P00519 1130 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 ERCC5P28715 1186 aaPredicted RBP11.31□□□□□ -0.6
FOXN4-201ENST00000299162 LONP1P36776 959 aaKnown RBP11.31□□□□□ -0.6
FOXN4-201ENST00000299162 ETF1P62495 437 aaKnown RBP11.31□□□□□ -0.6
FOXN4-201ENST00000299162 NR1I3Q14994 352 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 ADGRF4Q8IZF3 695 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 ANKRD20A12PQ8NF67 263 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 MRPL44Q9H9J2 332 aaKnown RBP11.31□□□□□ -0.6
FOXN4-201ENST00000299162 PUF60Q9UHX1 559 aaKnown RBP11.31□□□□□ -0.6
FOXN4-201ENST00000299162 PDS5AQ29RF7 1337 aaKnown RBP11.31□□□□□ -0.6
FOXN4-201ENST00000299162 NKRFO15226 690 aaKnown RBP eCLIP11.3□□□□□ -0.6
FOXN4-201ENST00000299162 FANCGO15287 622 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 HLA-DOAP06340 250 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 CRKP46108 304 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 TRAPPC10P48553 1259 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 KLK7P49862 253 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 CALCRLQ16602 461 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 SH3RF1Q7Z6J0 888 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 SP8Q8IXZ3 490 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 FAM212AQ96EL1 285 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 NUDT12Q9BQG2 462 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 SLF1Q9BQI6 1058 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 DDTLA6NHG4 134 aaPredicted RBP11.3□□□□□ -0.6
FOXN4-201ENST00000299162 ARHGAP6O43182 974 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 TPM1P09493 284 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 CCDC172P0C7W6 258 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 ADCY7P51828 1080 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 STK4Q13043 487 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 ENOX2Q16206 610 aaKnown RBP11.3□□□□□ -0.6
FOXN4-201ENST00000299162 RAD9BQ6WBX8 426 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 RNF217Q8TC41 542 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 COA1Q9GZY4 146 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 KANSL2Q9H9L4 492 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 EXOC1Q9NV70 894 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 LRWD1Q9UFC0 647 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 A0A1B0GUL6 1792 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 B4DLN1 442 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 KRT9P35527 623 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 SLC1A4P43007 532 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 SEPT2Q15019 361 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 NLGN1Q8N2Q7 840 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 TXLNBQ8N3L3 684 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 CSGALNACT2Q8N6G5 542 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 CCDC102AQ96A19 550 aa11.3□□□□□ -0.6
FOXN4-201ENST00000299162 ADD3Q9UEY8 706 aaKnown RBP11.3□□□□□ -0.6
FOXN4-201ENST00000299162 TCP10L2B9ZVM9 353 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 ZSCAN12O43309 604 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 TTLL1O95922 423 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 CASQ1P31415 396 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 COPB1P53618 953 aaKnown RBP11.29□□□□□ -0.6
FOXN4-201ENST00000299162 SLC27A3Q5K4L6 730 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 REXO1L1PQ8IX06 675 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 SPATA20Q8TB22 786 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 SNX29Q8TEQ0 813 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 CRAMP1Q96RY5 1269 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 HINFPQ9BQA5 517 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 MAGEC2Q9UBF1 373 aaPredicted RBP11.29□□□□□ -0.6
FOXN4-201ENST00000299162 SCN7AQ01118 1682 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 SNED1Q8TER0 1413 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 A0A1B0GTH6 734 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 C21orf2O43822 256 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 RAD17O75943 681 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 MTIF2P46199 727 aaKnown RBP11.29□□□□□ -0.6
FOXN4-201ENST00000299162 ZNF658Q5TYW1 1059 aaPredicted RBP11.29□□□□□ -0.6
FOXN4-201ENST00000299162 LEKR1Q6ZMV7 388 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 KRT25Q7Z3Z0 450 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 CCDC84Q86UT8 332 aaPredicted RBP11.29□□□□□ -0.6
FOXN4-201ENST00000299162 GLIS3Q8NEA6 775 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 ZMYND12Q9H0C1 365 aa11.29□□□□□ -0.6
FOXN4-201ENST00000299162 PSDA5PKW4 1024 aaPredicted RBP11.28□□□□□ -0.6
FOXN4-201ENST00000299162 SASH3O75995 380 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 GYPCP04921 128 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 NPR1P16066 1061 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 UBXN2AP68543 259 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 PPARDQ03181 441 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 SEMA3FQ13275 785 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 APOBEC3HQ6NTF7 200 aaKnown RBP11.28□□□□□ -0.6
FOXN4-201ENST00000299162 TMEM139Q8IV31 216 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 CALML4Q96GE6 196 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 JMJD4Q9H9V9 463 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 PSMA7O14818 248 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 EEF2P13639 858 aaKnown RBP11.28□□□□□ -0.6
FOXN4-201ENST00000299162 SHMT1P34896 483 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 STIM1Q13586 685 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 TCP11X2Q5H9J9 407 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 ZNF569Q5MCW4 686 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 ARL6IP4Q66PJ3 421 aaKnown RBP11.28□□□□□ -0.6
FOXN4-201ENST00000299162 FCHSD1Q86WN1 690 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 CHP1Q99653 195 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 TANGO6Q9C0B7 1094 aa11.28□□□□□ -0.6
FOXN4-201ENST00000299162 VEZTQ9HBM0 779 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms