RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 FAM193AP78312 1265 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 GRB10Q13322 594 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 PRR5LQ6MZQ0 368 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 FAM196AQ6ZSG2 479 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 COA7Q96BR5 231 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 CUEDC2Q9H467 287 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 HAUS4Q9H6D7 363 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 PDE11AQ9HCR9 933 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 BLOC1S4Q9NUP1 217 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
BCCIP-202ENST00000299130 L1RE1Q9UN81 338 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 PSMD14O00487 310 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 SLC37A4O43826 429 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 N4BP1O75113 896 aaKnown RBP15.23■□□□□ 0.03
BCCIP-202ENST00000299130 MTIF2P46199 727 aaKnown RBP15.23■□□□□ 0.03
BCCIP-202ENST00000299130 NT5C2P49902 561 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 CYP27A1Q02318 531 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 TRAPPC3LQ5T215 181 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 GPIHBP1Q8IV16 184 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 NOC3LQ8WTT2 800 aaKnown RBP15.23■□□□□ 0.03
BCCIP-202ENST00000299130 PNMA5Q96PV4 448 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 MMS19Q96T76 1030 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 NUDT12Q9BQG2 462 aa15.23■□□□□ 0.03
BCCIP-202ENST00000299130 NHEJ1Q9H9Q4 299 aaPredicted RBP15.23■□□□□ 0.03
BCCIP-202ENST00000299130 TDP2O95551 362 aa15.22■□□□□ 0.03
BCCIP-202ENST00000299130 PLEKP08567 350 aaPredicted RBP15.22■□□□□ 0.03
BCCIP-202ENST00000299130 GNA11P29992 359 aa15.22■□□□□ 0.03
BCCIP-202ENST00000299130 EIF6P56537 245 aaKnown RBP15.22■□□□□ 0.03
BCCIP-202ENST00000299130 SOGA3Q5TF21 947 aa15.22■□□□□ 0.03
BCCIP-202ENST00000299130 C15orf52Q6ZUT6 534 aaKnown RBP15.22■□□□□ 0.03
BCCIP-202ENST00000299130 PCMTD1Q96MG8 357 aaPredicted RBP15.22■□□□□ 0.03
BCCIP-202ENST00000299130 NOC4LQ9BVI4 516 aaKnown RBP15.22■□□□□ 0.03
BCCIP-202ENST00000299130 SEC63Q9UGP8 760 aaKnown RBP15.22■□□□□ 0.03
BCCIP-202ENST00000299130 MYMKA6NI61 221 aa15.22■□□□□ 0.03
BCCIP-202ENST00000299130 EPHB6O15197 1021 aa15.22■□□□□ 0.03
BCCIP-202ENST00000299130 TSR1Q2NL82 804 aaKnown RBP15.22■□□□□ 0.03
BCCIP-202ENST00000299130 MFSD14BQ5SR56 506 aa15.22■□□□□ 0.03
BCCIP-202ENST00000299130 DYMQ7RTS9 669 aa15.22■□□□□ 0.03
BCCIP-202ENST00000299130 REXO1Q8N1G1 1221 aaKnown RBP15.22■□□□□ 0.03
BCCIP-202ENST00000299130 JAKMIP2Q96AA8 810 aa15.22■□□□□ 0.03
BCCIP-202ENST00000299130 MTMR9Q96QG7 549 aa15.22■□□□□ 0.03
BCCIP-202ENST00000299130 MAGEF1Q9HAY2 307 aa15.22■□□□□ 0.03
BCCIP-202ENST00000299130 TAF1LQ8IZX4 1826 aa15.21■□□□□ 0.03
BCCIP-202ENST00000299130 BICDL2A1A5D9 508 aa15.21■□□□□ 0.03
BCCIP-202ENST00000299130 POTEB2H3BUK9 544 aa15.21■□□□□ 0.03
BCCIP-202ENST00000299130 ZNF263O14978 683 aa15.21■□□□□ 0.03
BCCIP-202ENST00000299130 PDHBP11177 359 aa15.21■□□□□ 0.03
BCCIP-202ENST00000299130 IL1R1P14778 569 aa15.21■□□□□ 0.03
BCCIP-202ENST00000299130 ERCC3P19447 782 aa15.21■□□□□ 0.03
BCCIP-202ENST00000299130 KIAA1328Q86T90 577 aa15.21■□□□□ 0.03
BCCIP-202ENST00000299130 LRRC47Q8N1G4 583 aaKnown RBP15.21■□□□□ 0.03
BCCIP-202ENST00000299130 RPGRQ92834 1020 aaKnown RBP15.21■□□□□ 0.03
BCCIP-202ENST00000299130 CAPZA3Q96KX2 299 aa15.21■□□□□ 0.03
BCCIP-202ENST00000299130 ZNF287Q9HBT7 754 aa15.21■□□□□ 0.03
BCCIP-202ENST00000299130 POLLQ9UGP5 575 aa15.21■□□□□ 0.03
BCCIP-202ENST00000299130 POTEMA6NI47 508 aa15.21■□□□□ 0.02
BCCIP-202ENST00000299130 ZBED6P86452 979 aa15.21■□□□□ 0.02
BCCIP-202ENST00000299130 HDXQ7Z353 690 aa15.21■□□□□ 0.02
BCCIP-202ENST00000299130 KRT26Q7Z3Y9 468 aa15.21■□□□□ 0.02
BCCIP-202ENST00000299130 GLIS3Q8NEA6 775 aa15.21■□□□□ 0.02
BCCIP-202ENST00000299130 GJA10Q969M2 543 aa15.21■□□□□ 0.02
BCCIP-202ENST00000299130 RIOX1Q9H6W3 641 aa15.21■□□□□ 0.02
BCCIP-202ENST00000299130 LTBP4Q8N2S1 1624 aa15.2■□□□□ 0.02
BCCIP-202ENST00000299130 ZNF185O15231 689 aa15.2■□□□□ 0.02
BCCIP-202ENST00000299130 NOVP48745 357 aa15.2■□□□□ 0.02
BCCIP-202ENST00000299130 HNRNPH2P55795 449 aaKnown RBP15.2■□□□□ 0.02
BCCIP-202ENST00000299130 PICALMQ13492 652 aa15.2■□□□□ 0.02
BCCIP-202ENST00000299130 KCNK18Q7Z418 384 aa15.2■□□□□ 0.02
BCCIP-202ENST00000299130 ZSCAN29Q8IWY8 852 aaPredicted RBP15.2■□□□□ 0.02
BCCIP-202ENST00000299130 GPCPD1Q9NPB8 672 aa15.2■□□□□ 0.02
BCCIP-202ENST00000299130 GGA1Q9UJY5 639 aa15.2■□□□□ 0.02
BCCIP-202ENST00000299130 SEMA3FQ13275 785 aa15.2■□□□□ 0.02
BCCIP-202ENST00000299130 CALCRLQ16602 461 aa15.2■□□□□ 0.02
BCCIP-202ENST00000299130 PAPD7Q5XG87 772 aaKnown RBP15.2■□□□□ 0.02
BCCIP-202ENST00000299130 CENPPQ6IPU0 288 aa15.2■□□□□ 0.02
BCCIP-202ENST00000299130 SMCR8Q8TEV9 937 aaPredicted RBP15.2■□□□□ 0.02
BCCIP-202ENST00000299130 CCDC47Q96A33 483 aaKnown RBP15.2■□□□□ 0.02
BCCIP-202ENST00000299130 CALML4Q96GE6 196 aa15.2■□□□□ 0.02
BCCIP-202ENST00000299130 LRRC4BQ9NT99 713 aa15.2■□□□□ 0.02
BCCIP-202ENST00000299130 LRWD1Q9UFC0 647 aa15.2■□□□□ 0.02
BCCIP-202ENST00000299130 ADAM21Q9UKJ8 722 aa15.2■□□□□ 0.02
BCCIP-202ENST00000299130 MACROD2A1Z1Q3 448 aa15.19■□□□□ 0.02
BCCIP-202ENST00000299130 LRRIQ3A6PVS8 624 aaPredicted RBP15.19■□□□□ 0.02
BCCIP-202ENST00000299130 EIF3CLB5ME19 914 aaKnown RBP15.19■□□□□ 0.02
BCCIP-202ENST00000299130 SLURP2P0DP57 97 aa15.19■□□□□ 0.02
BCCIP-202ENST00000299130 AKR1B1P15121 316 aa15.19■□□□□ 0.02
BCCIP-202ENST00000299130 KRT83P78385 493 aa15.19■□□□□ 0.02
BCCIP-202ENST00000299130 ECM1Q16610 540 aa15.19■□□□□ 0.02
BCCIP-202ENST00000299130 CNNM4Q6P4Q7 775 aa15.19■□□□□ 0.02
BCCIP-202ENST00000299130 SV2BQ7L1I2 683 aa15.19■□□□□ 0.02
BCCIP-202ENST00000299130 ERGIC2Q96RQ1 377 aa15.19■□□□□ 0.02
BCCIP-202ENST00000299130 EIF3CQ99613 913 aaKnown RBP15.19■□□□□ 0.02
BCCIP-202ENST00000299130 NUP58Q9BVL2 599 aa15.19■□□□□ 0.02
BCCIP-202ENST00000299130 SAR1BQ9Y6B6 198 aa15.19■□□□□ 0.02
BCCIP-202ENST00000299130 CCDC66A2RUB6 948 aa15.18■□□□□ 0.02
BCCIP-202ENST00000299130 PDE2AO00408 941 aaPredicted RBP15.18■□□□□ 0.02
BCCIP-202ENST00000299130 PPP1R11O60927 126 aaPredicted RBP15.18■□□□□ 0.02
BCCIP-202ENST00000299130 ERLIN1O75477 346 aa15.18■□□□□ 0.02
BCCIP-202ENST00000299130 CYLC1P35663 651 aaPredicted RBP15.18■□□□□ 0.02
BCCIP-202ENST00000299130 AMPD3Q01432 767 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms